RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 LINC01599Q8WXQ3 324 aa6.78□□□□□ -1.32
AMBRA1-209ENST00000529963 COPS5Q92905 334 aa6.78□□□□□ -1.32
AMBRA1-209ENST00000529963 ZNF669Q96BR6 464 aaPredicted RBP6.78□□□□□ -1.32
AMBRA1-209ENST00000529963 PTCHD1Q96NR3 888 aa6.78□□□□□ -1.32
AMBRA1-209ENST00000529963 TMEFF2Q9UIK5 374 aaPredicted RBP6.78□□□□□ -1.32
AMBRA1-209ENST00000529963 KDRP35968 1356 aa6.78□□□□□ -1.32
AMBRA1-209ENST00000529963 ARNTLO00327 626 aa6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 DLX3O60479 287 aa6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 PABPC1P11940 636 aaKnown RBP6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 HOXC12P31275 282 aa6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 TGFB2P61812 414 aa6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 HTRA3P83110 453 aa6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 TIGD5Q53EQ6 642 aa6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 ZNF530Q6P9A1 599 aaPredicted RBP6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 NSMFQ6X4W1 530 aa6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 KSR1Q8IVT5 923 aa6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 SMC1BQ8NDV3 1235 aa6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 FRS2Q8WU20 508 aa6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 OSBP2Q969R2 916 aa6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 EXOC2Q96KP1 924 aa6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 FCRL2Q96LA5 508 aaPredicted RBP6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 RNPC3Q96LT9 517 aaKnown RBP6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 CDC6Q99741 560 aa6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 CTNND2Q9UQB3 1225 aa6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 PTCH2Q9Y6C5 1203 aa6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 PDE4DIPQ5VU43 2346 aa6.77□□□□□ -1.33
AMBRA1-209ENST00000529963 EFEMP2O95967 443 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 RFC4P35249 363 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 SQSTM1Q13501 440 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 C1orf141Q5JVX7 400 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 EEF1DP3Q658K8 133 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 MBLAC2Q68D91 279 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 RCSD1Q6JBY9 416 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 CEP128Q6ZU80 1094 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 THAP3Q8WTV1 239 aaPredicted RBP6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 PANK3Q9H999 370 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 C10orf71Q711Q0 1435 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 PXDNLA1KZ92 1463 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 CICQ96RK0 1608 aaPredicted RBP6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 ESYT3A0FGR9 886 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 FADS2P1A8MWK0 482 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 RPS6KA4O75676 772 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 MTHFSP49914 203 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 DUSP4Q13115 394 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 C2orf27AQ580R0 203 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 FYB2Q5VWT5 728 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 USP53Q70EK8 1073 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 MORC1Q86VD1 984 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 CCDC103Q8IW40 242 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 SIRT2Q8IXJ6 389 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 KREMEN2Q8NCW0 462 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 NPLOC4Q8TAT6 608 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 C1orf159Q96HA4 380 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 JMJD8Q96S16 334 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 PCGF6Q9BYE7 350 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 NMRK2Q9NPI5 230 aa6.76□□□□□ -1.33
AMBRA1-209ENST00000529963 KDM6AO15550 1401 aaPredicted RBP6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 A0A0G2JLW4 131 aa6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 NPHP3-ACAD11A0A0J9YXS1 232 aa6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 NOTOA8MTQ0 251 aa6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 PSPNO60542 156 aa6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 HSPA5P11021 654 aaKnown RBP6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 FGFR1P11362 822 aa6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 GYS1P13807 737 aa6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 PAMP19021 973 aa6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 GDNFP39905 211 aa6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 RTP1P59025 263 aa6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 INF2Q27J81 1249 aa6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 NOP9Q86U38 636 aaKnown RBP6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 PPIL6Q8IXY8 311 aa6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 KCTD13Q8WZ19 329 aa6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 SP110Q9HB58 689 aa6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 ADGRE2Q9UHX3 823 aa6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 KNSTRNQ9Y448 316 aa6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 ZNF831Q5JPB2 1677 aa6.75□□□□□ -1.33
AMBRA1-209ENST00000529963 TRBV23-1A0A0A0MS06 115 aa6.74□□□□□ -1.33
AMBRA1-209ENST00000529963 TBC1D8O95759 1140 aa6.74□□□□□ -1.33
AMBRA1-209ENST00000529963 SCG5P05408 212 aa6.74□□□□□ -1.33
AMBRA1-209ENST00000529963 LCP1P13796 627 aa6.74□□□□□ -1.33
AMBRA1-209ENST00000529963 DPEP1P16444 411 aa6.74□□□□□ -1.33
AMBRA1-209ENST00000529963 CRKLP46109 303 aaKnown RBP6.74□□□□□ -1.33
AMBRA1-209ENST00000529963 CTCFP49711 727 aaPredicted RBP6.74□□□□□ -1.33
AMBRA1-209ENST00000529963 SLC14A2Q15849 920 aa6.74□□□□□ -1.33
AMBRA1-209ENST00000529963 NTRK3Q16288 839 aa6.74□□□□□ -1.33
AMBRA1-209ENST00000529963 SULT6B1Q6IMI4 303 aa6.74□□□□□ -1.33
AMBRA1-209ENST00000529963 JAMLQ86YT9 394 aa6.74□□□□□ -1.33
AMBRA1-209ENST00000529963 ANKS4BQ8N8V4 417 aa6.74□□□□□ -1.33
AMBRA1-209ENST00000529963 PDZD8Q8NEN9 1154 aa6.74□□□□□ -1.33
AMBRA1-209ENST00000529963 PLCD4Q9BRC7 762 aa6.74□□□□□ -1.33
AMBRA1-209ENST00000529963 TNFRSF10DQ9UBN6 386 aa6.74□□□□□ -1.33
AMBRA1-209ENST00000529963 KIF13BQ9NQT8 1826 aa6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 CPP00450 1065 aa6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 HPXP02790 462 aa6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 ENDOUP21128 410 aaKnown RBP6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 RGS19P49795 217 aa6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 HSF5Q4G112 596 aaPredicted RBP6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 SLC35F1Q5T1Q4 408 aa6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 KCNT2Q6UVM3 1135 aa6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 SLCO6A1Q86UG4 719 aa6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 MYLIPQ8WY64 445 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms