RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 TREHO43280 583 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 CCNT1O60563 726 aaKnown RBP14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 MARK3P27448 753 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 SLC26A2P50443 739 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 RBL2Q08999 1139 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 SHHQ15465 462 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 LRCH2Q5VUJ6 765 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 FAM160B1Q5W0V3 765 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 SWSAP1Q6NVH7 229 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 MIS18BP1Q6P0N0 1132 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 C16orf59Q7L2K0 433 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 SERINC5Q86VE9 423 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 CCDC155Q8N6L0 562 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 RETREG2Q8NC44 543 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 CAGE1Q8TC20 777 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 AFAP1L1Q8TED9 768 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 ATP6V0A1Q93050 837 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 TEKT3Q9BXF9 490 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 FOXP1Q9H334 677 aaPredicted RBP14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 TCEAL9Q9UHQ7 104 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 KIF3AQ9Y496 699 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 PCDHA10Q9Y5I2 948 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 NRCAMQ92823 1304 aa14.33□□□□□ -0.12
CCDC90B-216ENST00000529856 WDR64B1ANS9 1081 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 BACH1O14867 736 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 TBX3O15119 743 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 PSAPP07602 524 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 IQCF3P0C7M6 154 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 CUL4AQ13619 759 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 PLCB4Q15147 1175 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 TRIM71Q2Q1W2 868 aaKnown RBP14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 C9orf50Q5SZB4 431 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 B3GNT9Q6UX72 402 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 CCDC60Q8IWA6 550 aaPredicted RBP14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 LMBR1Q8WVP7 490 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 TNPO1Q92973 898 aaKnown RBP14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 WNT8BQ93098 351 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 SCLYQ96I15 445 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 FAM20AQ96MK3 541 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 UNC45AQ9H3U1 944 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 KCNMB3Q9NPA1 279 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 IL23AQ9NPF7 189 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 ZNF302Q9NR11 478 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 DISC1Q9NRI5 854 aa14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.32□□□□□ -0.12
CCDC90B-216ENST00000529856 TRIOBPQ9H2D6 2365 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 POTEB3A0JP26 581 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 RRN3P2A6NIE6 340 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 ACRP10323 421 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 CKBP12277 381 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 INSRRP14616 1297 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 ATP4AP20648 1035 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 GJB2P29033 226 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 SFNP31947 248 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 PPFIA1Q13136 1202 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 GRIK4Q16099 956 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 TMEM240Q5SV17 173 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 PDXDC2PQ6P474 469 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 POTEBQ6S5H4 581 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 RPUSD2Q8IZ73 545 aaKnown RBP14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 RDM1Q8NG50 284 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 HAS1Q92839 578 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 VWCEQ96DN2 955 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 SMC3Q9UQE7 1217 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 SAMM50Q9Y512 469 aa14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 MAFBQ9Y5Q3 323 aaPredicted RBP14.31□□□□□ -0.12
CCDC90B-216ENST00000529856 MBLAC1A4D2B0 266 aaPredicted RBP14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 WNT7AO00755 349 aa14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 HBP1O60381 514 aa14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 SELPP16109 830 aa14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 U2AF2P26368 475 aaKnown RBP eCLIP14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 RFC2P35250 354 aa14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 JAK3P52333 1124 aa14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 LRIT3Q3SXY7 679 aa14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 MARCH8Q5T0T0 291 aa14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 TRAF7Q6Q0C0 670 aa14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 ZNF365Q70YC5 407 aa14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 ATP8B4Q8TF62 1192 aa14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 GABBR1Q9UBS5 961 aa14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 TRPC6Q9Y210 931 aa14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 WDR81Q562E7 1941 aa14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 MYH9P35579 1960 aaKnown RBP14.3□□□□□ -0.12
CCDC90B-216ENST00000529856 KIF28PB7ZC32 967 aa14.29□□□□□ -0.12
CCDC90B-216ENST00000529856 CHMP2AO43633 222 aa14.29□□□□□ -0.12
CCDC90B-216ENST00000529856 MARCH6O60337 910 aa14.29□□□□□ -0.12
CCDC90B-216ENST00000529856 BAG4O95429 457 aaKnown RBP14.29□□□□□ -0.12
CCDC90B-216ENST00000529856 PARNO95453 639 aaKnown RBP14.29□□□□□ -0.12
CCDC90B-216ENST00000529856 THPOP40225 353 aa14.29□□□□□ -0.12
CCDC90B-216ENST00000529856 PPP2R5CQ13362 524 aa14.29□□□□□ -0.12
CCDC90B-216ENST00000529856 GNL2Q13823 731 aaKnown RBP14.29□□□□□ -0.12
CCDC90B-216ENST00000529856 GPNMBQ14956 572 aa14.29□□□□□ -0.12
CCDC90B-216ENST00000529856 ZNF618Q5T7W0 954 aa14.29□□□□□ -0.12
CCDC90B-216ENST00000529856 PSRC1Q6PGN9 363 aaPredicted RBP14.29□□□□□ -0.12
CCDC90B-216ENST00000529856 LRRC8DQ7L1W4 858 aa14.29□□□□□ -0.12
CCDC90B-216ENST00000529856 MIER3Q7Z3K6 550 aa14.29□□□□□ -0.12
CCDC90B-216ENST00000529856 NOSTRINQ8IVI9 506 aa14.29□□□□□ -0.12
CCDC90B-216ENST00000529856 SLFN12Q8IYM2 578 aa14.29□□□□□ -0.12
CCDC90B-216ENST00000529856 VAV3Q9UKW4 847 aa14.29□□□□□ -0.12
CCDC90B-216ENST00000529856 SCN5AQ14524 2016 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms