RNA–Protein interactions for RNA: ENST00000529371.5

LTBP3-213, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-213ENST00000529371 ATP6V0A1Q93050 837 aa28■■■□□ 2.07
LTBP3-213ENST00000529371 PCYT2Q99447 389 aa28■■■□□ 2.07
LTBP3-213ENST00000529371 ATP6V1DQ9Y5K8 247 aa28■■■□□ 2.07
LTBP3-213ENST00000529371 IGKV6D-21A0A0A0MT36 114 aa27.99■■■□□ 2.07
LTBP3-213ENST00000529371 HAS3O00219 553 aa27.99■■■□□ 2.07
LTBP3-213ENST00000529371 PTPN11Q06124 597 aaPredicted RBP27.99■■■□□ 2.07
LTBP3-213ENST00000529371 SNX17Q15036 470 aa27.99■■■□□ 2.07
LTBP3-213ENST00000529371 EPHA7Q15375 998 aa27.99■■■□□ 2.07
LTBP3-213ENST00000529371 FOXD4L6Q3SYB3 417 aaPredicted RBP27.99■■■□□ 2.07
LTBP3-213ENST00000529371 TRIM60Q495X7 471 aa27.99■■■□□ 2.07
LTBP3-213ENST00000529371 C1orf53Q5VUE5 145 aa27.99■■■□□ 2.07
LTBP3-213ENST00000529371 FOXD4L3Q6VB84 417 aaPredicted RBP27.99■■■□□ 2.07
LTBP3-213ENST00000529371 TRPC6Q9Y210 931 aa27.99■■■□□ 2.07
LTBP3-213ENST00000529371 EML1O00423 815 aa27.98■■■□□ 2.07
LTBP3-213ENST00000529371 TLR3O15455 904 aaKnown RBP27.98■■■□□ 2.07
LTBP3-213ENST00000529371 PQBP1O60828 265 aaKnown RBP27.98■■■□□ 2.07
LTBP3-213ENST00000529371 DKC1O60832 514 aaKnown RBP eCLIP27.98■■■□□ 2.07
LTBP3-213ENST00000529371 CEBPZQ03701 1054 aaKnown RBP27.98■■■□□ 2.07
LTBP3-213ENST00000529371 SPIRE1Q08AE8 756 aa27.98■■■□□ 2.07
LTBP3-213ENST00000529371 ARL6IP4Q66PJ3 421 aaKnown RBP27.98■■■□□ 2.07
LTBP3-213ENST00000529371 ERMNQ8TAM6 284 aa27.98■■■□□ 2.07
LTBP3-213ENST00000529371 CLIC4Q9Y696 253 aa27.98■■■□□ 2.07
LTBP3-213ENST00000529371 GRIN2DO15399 1336 aa27.97■■■□□ 2.07
LTBP3-213ENST00000529371 IGSF9BQ9UPX0 1349 aa27.97■■■□□ 2.07
LTBP3-213ENST00000529371 MYH15Q9Y2K3 1946 aa27.97■■■□□ 2.07
LTBP3-213ENST00000529371 POTEMA6NI47 508 aa27.97■■■□□ 2.07
LTBP3-213ENST00000529371 DCDC2CA8MYV0 355 aa27.97■■■□□ 2.07
LTBP3-213ENST00000529371 FXR2P51116 673 aaKnown RBP eCLIP27.97■■■□□ 2.07
LTBP3-213ENST00000529371 SLC43A3Q8NBI5 491 aa27.97■■■□□ 2.07
LTBP3-213ENST00000529371 NEK9Q8TD19 979 aa27.97■■■□□ 2.07
LTBP3-213ENST00000529371 FAM167AQ96KS9 214 aa27.97■■■□□ 2.07
LTBP3-213ENST00000529371 USP28Q96RU2 1077 aa27.97■■■□□ 2.07
LTBP3-213ENST00000529371 FTOQ9C0B1 505 aaKnown RBP eCLIP27.97■■■□□ 2.07
LTBP3-213ENST00000529371 SMIM10L2AP0DMW4 78 aa27.96■■■□□ 2.07
LTBP3-213ENST00000529371 SMIM10L2BP0DMW5 78 aa27.96■■■□□ 2.07
LTBP3-213ENST00000529371 RGS19P49795 217 aa27.96■■■□□ 2.07
LTBP3-213ENST00000529371 PSMC5P62195 406 aa27.96■■■□□ 2.07
LTBP3-213ENST00000529371 STK38Q15208 465 aa27.96■■■□□ 2.07
LTBP3-213ENST00000529371 ATL3Q6DD88 541 aa27.96■■■□□ 2.07
LTBP3-213ENST00000529371 SESTD1Q86VW0 696 aa27.96■■■□□ 2.07
LTBP3-213ENST00000529371 BANK1Q8NDB2 785 aa27.96■■■□□ 2.07
LTBP3-213ENST00000529371 PPP1R13LQ8WUF5 828 aa27.96■■■□□ 2.07
LTBP3-213ENST00000529371 DPF3Q92784 378 aa27.96■■■□□ 2.07
LTBP3-213ENST00000529371 HDAC6Q9UBN7 1215 aa27.96■■■□□ 2.07
LTBP3-213ENST00000529371 NOD1Q9Y239 953 aa27.96■■■□□ 2.07
LTBP3-213ENST00000529371 MAFBQ9Y5Q3 323 aaPredicted RBP27.96■■■□□ 2.07
LTBP3-213ENST00000529371 STK24Q9Y6E0 443 aa27.96■■■□□ 2.07
LTBP3-213ENST00000529371 BRCA2P51587 3418 aa27.95■■■□□ 2.07
LTBP3-213ENST00000529371 POTEB3A0JP26 581 aa27.95■■■□□ 2.06
LTBP3-213ENST00000529371 EVI5O60447 810 aa27.95■■■□□ 2.06
LTBP3-213ENST00000529371 P4HBP07237 508 aaKnown RBP27.95■■■□□ 2.06
LTBP3-213ENST00000529371 GNAT1P11488 350 aa27.95■■■□□ 2.06
LTBP3-213ENST00000529371 CDK7P50613 346 aa27.95■■■□□ 2.06
LTBP3-213ENST00000529371 PPFIA1Q13136 1202 aa27.95■■■□□ 2.06
LTBP3-213ENST00000529371 PLCB4Q15147 1175 aa27.95■■■□□ 2.06
LTBP3-213ENST00000529371 POTEBQ6S5H4 581 aa27.95■■■□□ 2.06
LTBP3-213ENST00000529371 LRWD1Q9UFC0 647 aa27.95■■■□□ 2.06
LTBP3-213ENST00000529371 CIZ1Q9ULV3 898 aaPredicted RBP27.95■■■□□ 2.06
LTBP3-213ENST00000529371 ZDHHC9Q9Y397 364 aa27.95■■■□□ 2.06
LTBP3-213ENST00000529371 C17orf102A2RUQ5 167 aa27.94■■■□□ 2.06
LTBP3-213ENST00000529371 VWA3AA6NCI4 1184 aa27.94■■■□□ 2.06
LTBP3-213ENST00000529371 QARSP47897 775 aaKnown RBP27.94■■■□□ 2.06
LTBP3-213ENST00000529371 PRKCEQ02156 737 aa27.94■■■□□ 2.06
LTBP3-213ENST00000529371 TLE2Q04725 743 aa27.94■■■□□ 2.06
LTBP3-213ENST00000529371 HAUS3Q68CZ6 603 aa27.94■■■□□ 2.06
LTBP3-213ENST00000529371 ANKRD33Q7Z3H0 272 aa27.94■■■□□ 2.06
LTBP3-213ENST00000529371 ATP8B4Q8TF62 1192 aa27.94■■■□□ 2.06
LTBP3-213ENST00000529371 TOX2Q96NM4 488 aa27.94■■■□□ 2.06
LTBP3-213ENST00000529371 EIF2AK1Q9BQI3 630 aaKnown RBP27.94■■■□□ 2.06
LTBP3-213ENST00000529371 RNPEPQ9H4A4 650 aa27.94■■■□□ 2.06
LTBP3-213ENST00000529371 GTF2IRD1Q9UHL9 959 aa27.94■■■□□ 2.06
LTBP3-213ENST00000529371 CFAP45Q9UL16 551 aa27.94■■■□□ 2.06
LTBP3-213ENST00000529371 MYH9P35579 1960 aaKnown RBP27.93■■■□□ 2.06
LTBP3-213ENST00000529371 HBP1O60381 514 aa27.93■■■□□ 2.06
LTBP3-213ENST00000529371 DDIT3P35638 169 aa27.93■■■□□ 2.06
LTBP3-213ENST00000529371 CYP4A11Q02928 519 aa27.93■■■□□ 2.06
LTBP3-213ENST00000529371 PDIA5Q14554 519 aa27.93■■■□□ 2.06
LTBP3-213ENST00000529371 UGCGQ16739 394 aa27.93■■■□□ 2.06
LTBP3-213ENST00000529371 TRMT1LQ7Z2T5 733 aaKnown RBP27.93■■■□□ 2.06
LTBP3-213ENST00000529371 BBXQ8WY36 941 aaPredicted RBP27.93■■■□□ 2.06
LTBP3-213ENST00000529371 DYDC2Q96IM9 177 aa27.93■■■□□ 2.06
LTBP3-213ENST00000529371 LXNQ9BS40 222 aa27.93■■■□□ 2.06
LTBP3-213ENST00000529371 NRBP2Q9NSY0 501 aa27.93■■■□□ 2.06
LTBP3-213ENST00000529371 TFIP11Q9UBB9 837 aaKnown RBP27.93■■■□□ 2.06
LTBP3-213ENST00000529371 NRCAMQ92823 1304 aa27.92■■■□□ 2.06
LTBP3-213ENST00000529371 OATP04181 439 aa27.92■■■□□ 2.06
LTBP3-213ENST00000529371 NCLP19338 710 aaKnown RBP27.92■■■□□ 2.06
LTBP3-213ENST00000529371 NASPP49321 788 aaPredicted RBP27.92■■■□□ 2.06
LTBP3-213ENST00000529371 PTPAQ15257 358 aa27.92■■■□□ 2.06
LTBP3-213ENST00000529371 TPH2Q8IWU9 490 aa27.92■■■□□ 2.06
LTBP3-213ENST00000529371 FAM126BQ8IXS8 530 aa27.92■■■□□ 2.06
LTBP3-213ENST00000529371 C7orf61Q8IZ16 206 aa27.92■■■□□ 2.06
LTBP3-213ENST00000529371 IPO9Q96P70 1041 aaKnown RBP27.92■■■□□ 2.06
LTBP3-213ENST00000529371 ZSWIM4Q9H7M6 989 aa27.92■■■□□ 2.06
LTBP3-213ENST00000529371 RRN3P2A6NIE6 340 aa27.91■■■□□ 2.06
LTBP3-213ENST00000529371 YEATS4O95619 227 aa27.91■■■□□ 2.06
LTBP3-213ENST00000529371 MARCKSP29966 332 aaPredicted RBP27.91■■■□□ 2.06
LTBP3-213ENST00000529371 IGBP1P78318 339 aa27.91■■■□□ 2.06
LTBP3-213ENST00000529371 DNM1Q05193 864 aaKnown RBP27.91■■■□□ 2.06
LTBP3-213ENST00000529371 CTTNQ14247 550 aaKnown RBP27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms