RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 TRIM22Q8IYM9 498 aa13.73□□□□□ -0.21
COPB1-206ENST00000529210 SLC26A6Q9BXS9 759 aa13.73□□□□□ -0.21
COPB1-206ENST00000529210 UPF3BQ9BZI7 483 aaKnown RBP13.73□□□□□ -0.21
COPB1-206ENST00000529210 NCOA5Q9HCD5 579 aaKnown RBP13.73□□□□□ -0.21
COPB1-206ENST00000529210 PDRG1Q9NUG6 133 aa13.73□□□□□ -0.21
COPB1-206ENST00000529210 MYO9BQ13459 2157 aa13.73□□□□□ -0.21
COPB1-206ENST00000529210 SIP14410 1827 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 KIF28PB7ZC32 967 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 M0R2N6 131 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 DEXIO95424 95 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 POU3F3P20264 500 aaPredicted RBP13.72□□□□□ -0.21
COPB1-206ENST00000529210 SSRP1Q08945 709 aaKnown RBP13.72□□□□□ -0.21
COPB1-206ENST00000529210 PPFIA1Q13136 1202 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 GRIK4Q16099 956 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 TCTN1Q2MV58 587 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 MARCH8Q5T0T0 291 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 PPP2R2DQ66LE6 453 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 GALNT17Q6IS24 598 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 CPLX2Q6PUV4 134 aaKnown RBP13.72□□□□□ -0.21
COPB1-206ENST00000529210 ABHD15Q6UXT9 468 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 PLA2G4DQ86XP0 818 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 DAGLBQ8NCG7 672 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 GLG1Q92896 1179 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 GAS2L1Q99501 681 aaPredicted RBP13.72□□□□□ -0.21
COPB1-206ENST00000529210 C22orf23Q9BZE7 217 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 AZI2Q9H6S1 392 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 TBC1D22BQ9NU19 505 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 COL4A6Q14031 1691 aa13.72□□□□□ -0.21
COPB1-206ENST00000529210 IPO5O00410 1097 aaKnown RBP13.71□□□□□ -0.21
COPB1-206ENST00000529210 EDIL3O43854 480 aa13.71□□□□□ -0.21
COPB1-206ENST00000529210 GJB5O95377 273 aa13.71□□□□□ -0.21
COPB1-206ENST00000529210 CA3P07451 260 aa13.71□□□□□ -0.21
COPB1-206ENST00000529210 MYOGP15173 224 aa13.71□□□□□ -0.21
COPB1-206ENST00000529210 ZNF76P36508 570 aa13.71□□□□□ -0.21
COPB1-206ENST00000529210 STAT5BP51692 787 aa13.71□□□□□ -0.21
COPB1-206ENST00000529210 USP11P51784 963 aa13.71□□□□□ -0.21
COPB1-206ENST00000529210 MGAT3Q09327 533 aa13.71□□□□□ -0.21
COPB1-206ENST00000529210 ZNF746Q6NUN9 644 aaPredicted RBP13.71□□□□□ -0.21
COPB1-206ENST00000529210 FAM43BQ6ZT52 329 aaPredicted RBP13.71□□□□□ -0.21
COPB1-206ENST00000529210 DBF4BQ8NFT6 615 aa13.71□□□□□ -0.21
COPB1-206ENST00000529210 APBB2Q92870 758 aa13.71□□□□□ -0.21
COPB1-206ENST00000529210 LENG9Q96B70 501 aa13.71□□□□□ -0.21
COPB1-206ENST00000529210 PKD2L1Q9P0L9 805 aa13.71□□□□□ -0.21
COPB1-206ENST00000529210 VPS54Q9P1Q0 977 aa13.71□□□□□ -0.21
COPB1-206ENST00000529210 TUBE1Q9UJT0 475 aa13.71□□□□□ -0.21
COPB1-206ENST00000529210 SQORQ9Y6N5 450 aa13.71□□□□□ -0.21
COPB1-206ENST00000529210 SPTBN5Q9NRC6 3674 aaKnown RBP13.7□□□□□ -0.22
COPB1-206ENST00000529210 STK36Q9NRP7 1315 aa13.7□□□□□ -0.22
COPB1-206ENST00000529210 CPLX1O14810 134 aa13.7□□□□□ -0.22
COPB1-206ENST00000529210 PFKFB2O60825 505 aa13.7□□□□□ -0.22
COPB1-206ENST00000529210 CCNE2O96020 404 aa13.7□□□□□ -0.22
COPB1-206ENST00000529210 INSRRP14616 1297 aa13.7□□□□□ -0.22
COPB1-206ENST00000529210 DEFB103AP81534 67 aa13.7□□□□□ -0.22
COPB1-206ENST00000529210 ADGRE1Q14246 886 aa13.7□□□□□ -0.22
COPB1-206ENST00000529210 PLCB4Q15147 1175 aa13.7□□□□□ -0.22
COPB1-206ENST00000529210 ANKRD1Q15327 319 aa13.7□□□□□ -0.22
COPB1-206ENST00000529210 NPY5RQ15761 445 aa13.7□□□□□ -0.22
COPB1-206ENST00000529210 RSPH3Q86UC2 560 aa13.7□□□□□ -0.22
COPB1-206ENST00000529210 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
COPB1-206ENST00000529210 SMAP1Q8IYB5 467 aaPredicted RBP13.7□□□□□ -0.22
COPB1-206ENST00000529210 RAD9AQ99638 391 aa13.7□□□□□ -0.22
COPB1-206ENST00000529210 PRDM12Q9H4Q4 367 aa13.7□□□□□ -0.22
COPB1-206ENST00000529210 WDR81Q562E7 1941 aa13.69□□□□□ -0.22
COPB1-206ENST00000529210 HBP1O60381 514 aa13.69□□□□□ -0.22
COPB1-206ENST00000529210 CDKL5O76039 1030 aa13.69□□□□□ -0.22
COPB1-206ENST00000529210 CHRNA1P02708 482 aa13.69□□□□□ -0.22
COPB1-206ENST00000529210 MARK3P27448 753 aa13.69□□□□□ -0.22
COPB1-206ENST00000529210 HTRA4P83105 476 aaPredicted RBP13.69□□□□□ -0.22
COPB1-206ENST00000529210 KRT76Q01546 638 aa13.69□□□□□ -0.22
COPB1-206ENST00000529210 TAP1Q03518 808 aa13.69□□□□□ -0.22
COPB1-206ENST00000529210 SCRN1Q12765 414 aa13.69□□□□□ -0.22
COPB1-206ENST00000529210 MOXD1Q6UVY6 613 aa13.69□□□□□ -0.22
COPB1-206ENST00000529210 RUFY4Q6ZNE9 571 aa13.69□□□□□ -0.22
COPB1-206ENST00000529210 RASGRP4Q8TDF6 673 aa13.69□□□□□ -0.22
COPB1-206ENST00000529210 SEPT8Q92599 483 aa13.69□□□□□ -0.22
COPB1-206ENST00000529210 ZNF577Q9BSK1 485 aa13.69□□□□□ -0.22
COPB1-206ENST00000529210 PCDHA4Q9UN74 947 aa13.69□□□□□ -0.22
COPB1-206ENST00000529210 PCDHA2Q9Y5H9 948 aa13.69□□□□□ -0.22
COPB1-206ENST00000529210 COL1A2P08123 1366 aa13.69□□□□□ -0.22
COPB1-206ENST00000529210 KDM3AQ9Y4C1 1321 aa13.68□□□□□ -0.22
COPB1-206ENST00000529210 VCANP13611 3396 aa13.68□□□□□ -0.22
COPB1-206ENST00000529210 CYP3A7-CYP3A51PA0A087WV96 503 aa13.68□□□□□ -0.22
COPB1-206ENST00000529210 SMIM35A0A1B0GVV1 85 aa13.68□□□□□ -0.22
COPB1-206ENST00000529210 POTEB3A0JP26 581 aa13.68□□□□□ -0.22
COPB1-206ENST00000529210 TLL1O43897 1013 aa13.68□□□□□ -0.22
COPB1-206ENST00000529210 CYP3A7P24462 503 aa13.68□□□□□ -0.22
COPB1-206ENST00000529210 NLRP5P59047 1200 aa13.68□□□□□ -0.22
COPB1-206ENST00000529210 FAM160B1Q5W0V3 765 aa13.68□□□□□ -0.22
COPB1-206ENST00000529210 POTEBQ6S5H4 581 aa13.68□□□□□ -0.22
COPB1-206ENST00000529210 CCDC60Q8IWA6 550 aaPredicted RBP13.68□□□□□ -0.22
COPB1-206ENST00000529210 BLIDQ8IZY5 108 aa13.68□□□□□ -0.22
COPB1-206ENST00000529210 SP7Q8TDD2 431 aaPredicted RBP13.68□□□□□ -0.22
COPB1-206ENST00000529210 ATP8B4Q8TF62 1192 aa13.68□□□□□ -0.22
COPB1-206ENST00000529210 MBOAT7Q96N66 472 aa13.68□□□□□ -0.22
COPB1-206ENST00000529210 RIT2Q99578 217 aa13.68□□□□□ -0.22
COPB1-206ENST00000529210 IFIH1Q9BYX4 1025 aaKnown RBP13.68□□□□□ -0.22
COPB1-206ENST00000529210 OSBPL7Q9BZF2 842 aa13.68□□□□□ -0.22
COPB1-206ENST00000529210 TPCN1Q9ULQ1 816 aa13.68□□□□□ -0.22
COPB1-206ENST00000529210 MAFBQ9Y5Q3 323 aaPredicted RBP13.68□□□□□ -0.22
COPB1-206ENST00000529210 MYH9P35579 1960 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms