RNA–Protein interactions for RNA: ENST00000528853.1

PPFIA1-212, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-212ENST00000528853 CDSNQ15517 529 aa6.2□□□□□ -1.42
PPFIA1-212ENST00000528853 ZMAT1Q5H9K5 638 aa6.2□□□□□ -1.42
PPFIA1-212ENST00000528853 MAMDC2Q7Z304 686 aaPredicted RBP6.2□□□□□ -1.42
PPFIA1-212ENST00000528853 RBM12BQ8IXT5 1001 aaKnown RBP6.2□□□□□ -1.42
PPFIA1-212ENST00000528853 CKAP2LQ8IYA6 745 aa6.2□□□□□ -1.42
PPFIA1-212ENST00000528853 OSBP2Q969R2 916 aa6.2□□□□□ -1.42
PPFIA1-212ENST00000528853 LRRC37BQ96QE4 947 aa6.2□□□□□ -1.42
PPFIA1-212ENST00000528853 CDC6Q99741 560 aa6.2□□□□□ -1.42
PPFIA1-212ENST00000528853 KATNBL1Q9H079 304 aa6.2□□□□□ -1.42
PPFIA1-212ENST00000528853 IPPKQ9H8X2 491 aa6.2□□□□□ -1.42
PPFIA1-212ENST00000528853 POLD1P28340 1107 aa6.19□□□□□ -1.42
PPFIA1-212ENST00000528853 GJA4P35212 333 aa6.19□□□□□ -1.42
PPFIA1-212ENST00000528853 RAC3P60763 192 aa6.19□□□□□ -1.42
PPFIA1-212ENST00000528853 KRTAP1-1Q07627 177 aa6.19□□□□□ -1.42
PPFIA1-212ENST00000528853 GPR155Q7Z3F1 870 aa6.19□□□□□ -1.42
PPFIA1-212ENST00000528853 SCUBE1Q8IWY4 988 aa6.19□□□□□ -1.42
PPFIA1-212ENST00000528853 ZFPM1Q8IX07 1006 aa6.19□□□□□ -1.42
PPFIA1-212ENST00000528853 WDR48Q8TAF3 677 aa6.19□□□□□ -1.42
PPFIA1-212ENST00000528853 Q8TCH9 128 aa6.19□□□□□ -1.42
PPFIA1-212ENST00000528853 PTPN18Q99952 460 aa6.19□□□□□ -1.42
PPFIA1-212ENST00000528853 TACO1Q9BSH4 297 aaKnown RBP6.19□□□□□ -1.42
PPFIA1-212ENST00000528853 STK10O94804 968 aaKnown RBP6.18□□□□□ -1.42
PPFIA1-212ENST00000528853 AMHP03971 560 aa6.18□□□□□ -1.42
PPFIA1-212ENST00000528853 ST5P78524 1137 aa6.18□□□□□ -1.42
PPFIA1-212ENST00000528853 DBPQ10586 325 aaPredicted RBP6.18□□□□□ -1.42
PPFIA1-212ENST00000528853 NTRK3Q16288 839 aa6.18□□□□□ -1.42
PPFIA1-212ENST00000528853 BTBD8Q5XKL5 378 aa6.18□□□□□ -1.42
PPFIA1-212ENST00000528853 SCYL1Q96KG9 808 aa6.18□□□□□ -1.42
PPFIA1-212ENST00000528853 ZNF747Q9BV97 191 aa6.18□□□□□ -1.42
PPFIA1-212ENST00000528853 SPATA9Q9BWV2 254 aa6.18□□□□□ -1.42
PPFIA1-212ENST00000528853 ZNF341Q9BYN7 854 aa6.18□□□□□ -1.42
PPFIA1-212ENST00000528853 SLITRK6Q9H5Y7 841 aa6.18□□□□□ -1.42
PPFIA1-212ENST00000528853 CATSPERZQ9NTU4 200 aa6.18□□□□□ -1.42
PPFIA1-212ENST00000528853 RIC8BQ9NVN3 520 aa6.18□□□□□ -1.42
PPFIA1-212ENST00000528853 PPP1R1BQ9UD71 204 aaPredicted RBP6.18□□□□□ -1.42
PPFIA1-212ENST00000528853 FBXO10Q9UK96 956 aa6.18□□□□□ -1.42
PPFIA1-212ENST00000528853 ZFR2Q9UPR6 939 aaKnown RBP6.18□□□□□ -1.42
PPFIA1-212ENST00000528853 BLACEA4D250 179 aa6.17□□□□□ -1.42
PPFIA1-212ENST00000528853 SUMO1P63165 101 aaKnown RBP6.17□□□□□ -1.42
PPFIA1-212ENST00000528853 GPR19Q15760 415 aa6.17□□□□□ -1.42
PPFIA1-212ENST00000528853 WDR72Q3MJ13 1102 aa6.17□□□□□ -1.42
PPFIA1-212ENST00000528853 SPDYAQ5MJ70 313 aa6.17□□□□□ -1.42
PPFIA1-212ENST00000528853 TAX1BP1Q86VP1 789 aa6.17□□□□□ -1.42
PPFIA1-212ENST00000528853 PTPRN2Q92932 1015 aa6.17□□□□□ -1.42
PPFIA1-212ENST00000528853 FBXW5Q969U6 566 aa6.17□□□□□ -1.42
PPFIA1-212ENST00000528853 NEIL1Q96FI4 390 aaPredicted RBP6.17□□□□□ -1.42
PPFIA1-212ENST00000528853 GNRHR2Q96P88 292 aa6.17□□□□□ -1.42
PPFIA1-212ENST00000528853 CD244Q9BZW8 370 aa6.17□□□□□ -1.42
PPFIA1-212ENST00000528853 MSL2Q9HCI7 577 aa6.17□□□□□ -1.42
PPFIA1-212ENST00000528853 ATP23Q9Y6H3 246 aa6.17□□□□□ -1.42
PPFIA1-212ENST00000528853 PTPN1P18031 435 aaKnown RBP6.16□□□□□ -1.42
PPFIA1-212ENST00000528853 COMTP21964 271 aa6.16□□□□□ -1.42
PPFIA1-212ENST00000528853 R3HDM1Q15032 1099 aaKnown RBP6.16□□□□□ -1.42
PPFIA1-212ENST00000528853 CRY1Q16526 586 aa6.16□□□□□ -1.42
PPFIA1-212ENST00000528853 FAM47CQ5HY64 1035 aa6.16□□□□□ -1.42
PPFIA1-212ENST00000528853 FIGNQ5HY92 759 aa6.16□□□□□ -1.42
PPFIA1-212ENST00000528853 TCTN3Q6NUS6 607 aa6.16□□□□□ -1.42
PPFIA1-212ENST00000528853 CXXC5Q7LFL8 322 aaKnown RBP6.16□□□□□ -1.42
PPFIA1-212ENST00000528853 ADOQ96SZ5 270 aa6.16□□□□□ -1.42
PPFIA1-212ENST00000528853 SLC39A2Q9NP94 309 aa6.16□□□□□ -1.42
PPFIA1-212ENST00000528853 SRPK3Q9UPE1 567 aa6.16□□□□□ -1.42
PPFIA1-212ENST00000528853 TELO2Q9Y4R8 837 aa6.16□□□□□ -1.42
PPFIA1-212ENST00000528853 ESYT3A0FGR9 886 aa6.15□□□□□ -1.42
PPFIA1-212ENST00000528853 ACOT7O00154 380 aa6.15□□□□□ -1.42
PPFIA1-212ENST00000528853 PDPK1O15530 556 aa6.15□□□□□ -1.42
PPFIA1-212ENST00000528853 IL18BPO95998 194 aa6.15□□□□□ -1.42
PPFIA1-212ENST00000528853 ETV4P43268 484 aa6.15□□□□□ -1.42
PPFIA1-212ENST00000528853 MTERF2Q49AM1 385 aa6.15□□□□□ -1.42
PPFIA1-212ENST00000528853 ARHGAP36Q6ZRI8 547 aa6.15□□□□□ -1.42
PPFIA1-212ENST00000528853 FAM89AQ96GI7 184 aa6.15□□□□□ -1.42
PPFIA1-212ENST00000528853 WWC2-AS2Q96NR7 200 aa6.15□□□□□ -1.42
PPFIA1-212ENST00000528853 WNT9AO14904 365 aa6.14□□□□□ -1.43
PPFIA1-212ENST00000528853 FOXS1O43638 330 aa6.14□□□□□ -1.43
PPFIA1-212ENST00000528853 RAD17O75943 681 aa6.14□□□□□ -1.43
PPFIA1-212ENST00000528853 GUCY1A3Q02108 690 aa6.14□□□□□ -1.43
PPFIA1-212ENST00000528853 TOP3AQ13472 1001 aaPredicted RBP6.14□□□□□ -1.43
PPFIA1-212ENST00000528853 YOD1Q5VVQ6 348 aaPredicted RBP6.14□□□□□ -1.43
PPFIA1-212ENST00000528853 POLNQ7Z5Q5 900 aa6.14□□□□□ -1.43
PPFIA1-212ENST00000528853 EDAQ92838 391 aa6.14□□□□□ -1.43
PPFIA1-212ENST00000528853 OAZ3Q9UMX2 235 aa6.14□□□□□ -1.43
PPFIA1-212ENST00000528853 NR2E1Q9Y466 385 aa6.14□□□□□ -1.43
PPFIA1-212ENST00000528853 TRAF6Q9Y4K3 522 aa6.14□□□□□ -1.43
PPFIA1-212ENST00000528853 TRBV23-1A0A0A0MS06 115 aa6.13□□□□□ -1.43
PPFIA1-212ENST00000528853 HMGCRP04035 888 aa6.13□□□□□ -1.43
PPFIA1-212ENST00000528853 ZNF888P0CJ79 500 aaPredicted RBP6.13□□□□□ -1.43
PPFIA1-212ENST00000528853 CR2P20023 1033 aa6.13□□□□□ -1.43
PPFIA1-212ENST00000528853 PTGS1P23219 599 aa6.13□□□□□ -1.43
PPFIA1-212ENST00000528853 RPS19P39019 145 aaKnown RBP6.13□□□□□ -1.43
PPFIA1-212ENST00000528853 RRADP55042 308 aa6.13□□□□□ -1.43
PPFIA1-212ENST00000528853 HERVK_113P62684 666 aa6.13□□□□□ -1.43
PPFIA1-212ENST00000528853 GABREP78334 506 aa6.13□□□□□ -1.43
PPFIA1-212ENST00000528853 SSRP1Q08945 709 aaKnown RBP6.13□□□□□ -1.43
PPFIA1-212ENST00000528853 NRN1LQ496H8 165 aa6.13□□□□□ -1.43
PPFIA1-212ENST00000528853 C16orf59Q7L2K0 433 aa6.13□□□□□ -1.43
PPFIA1-212ENST00000528853 C12orf65Q9H3J6 166 aaKnown RBP6.13□□□□□ -1.43
PPFIA1-212ENST00000528853 INCENPQ9NQS7 918 aa6.13□□□□□ -1.43
PPFIA1-212ENST00000528853 PUF60Q9UHX1 559 aaKnown RBP6.13□□□□□ -1.43
PPFIA1-212ENST00000528853 HS3ST3A1Q9Y663 406 aa6.13□□□□□ -1.43
PPFIA1-212ENST00000528853 PRAMEF25A6NGN4 478 aa6.12□□□□□ -1.43
PPFIA1-212ENST00000528853 CDC14BO60729 498 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms