RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 RUFY3Q7L099 469 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 METTL16Q86W50 562 aaKnown RBP4.48□□□□□ -1.69
C11orf54-204ENST00000527003 IQCA1Q86XH1 822 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 MAPKAPK5Q8IW41 473 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 HSCBQ8IWL3 235 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 ZNF444Q8N0Y2 327 aaPredicted RBP4.48□□□□□ -1.69
C11orf54-204ENST00000527003 GLIS3Q8NEA6 775 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 SDR42E1Q8WUS8 393 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 DCPSQ96C86 337 aaKnown RBP4.48□□□□□ -1.69
C11orf54-204ENST00000527003 TMEM87BQ96K49 555 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 FAM84AQ96KN4 292 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 ZSCAN31Q96LW9 406 aaPredicted RBP4.48□□□□□ -1.69
C11orf54-204ENST00000527003 DMRTB1Q96MA1 342 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 JAKMIP1Q96N16 626 aaKnown RBP4.48□□□□□ -1.69
C11orf54-204ENST00000527003 TOX2Q96NM4 488 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 TRIM56Q9BRZ2 755 aaKnown RBP4.48□□□□□ -1.69
C11orf54-204ENST00000527003 KRTAP9-3Q9BYQ3 159 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 OSBPL5Q9H0X9 879 aaPredicted RBP4.48□□□□□ -1.69
C11orf54-204ENST00000527003 DNAJC25Q9H1X3 360 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 TDRD3Q9H7E2 651 aaKnown RBP4.48□□□□□ -1.69
C11orf54-204ENST00000527003 MKNK2Q9HBH9 465 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 LRRC4CQ9HCJ2 640 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 EPB41L4AQ9HCS5 686 aaPredicted RBP4.48□□□□□ -1.69
C11orf54-204ENST00000527003 GINM1Q9NU53 330 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 PDRG1Q9NUG6 133 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 TCP11L1Q9NUJ3 509 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 SERPINB13Q9UIV8 391 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 DCTN4Q9UJW0 460 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 ATRNL1Q5VV63 1379 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 ROBO3Q96MS0 1386 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 ARFGEF1Q9Y6D6 1849 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 COL2A1P02458 1487 aaPredicted RBP4.48□□□□□ -1.69
C11orf54-204ENST00000527003 A0A1B0GUL6 1792 aa4.48□□□□□ -1.69
C11orf54-204ENST00000527003 BRCA1P38398 1863 aaKnown RBP4.47□□□□□ -1.69
C11orf54-204ENST00000527003 DHX16O60231 1041 aaKnown RBP4.47□□□□□ -1.69
C11orf54-204ENST00000527003 GADD45BO75293 160 aaPredicted RBP4.47□□□□□ -1.69
C11orf54-204ENST00000527003 DDNO94850 711 aaPredicted RBP4.47□□□□□ -1.69
C11orf54-204ENST00000527003 PDIA4P13667 645 aaKnown RBP4.47□□□□□ -1.69
C11orf54-204ENST00000527003 DRD2P14416 443 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 VEGFAP15692 232 aaPredicted RBP4.47□□□□□ -1.69
C11orf54-204ENST00000527003 RPS6KB1P23443 525 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 ITPKAP23677 461 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 MAOBP27338 520 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 MAPK1P28482 360 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 EPHX2P34913 555 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 LIFRP42702 1097 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 CDK8P49336 464 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 RCAN1P53805 252 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 HAND2P61296 217 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 EXOSC10Q01780 885 aaKnown RBP4.47□□□□□ -1.69
C11orf54-204ENST00000527003 GABPAQ06546 454 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 MESP2Q0VG99 397 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 PICALMQ13492 652 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 PPP2R5BQ15173 497 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 NBPF9Q3BBW0 867 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 TBC1D10BQ4KMP7 808 aaPredicted RBP4.47□□□□□ -1.69
C11orf54-204ENST00000527003 DCAF15Q66K64 600 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 ZNF574Q6ZN55 896 aaPredicted RBP4.47□□□□□ -1.69
C11orf54-204ENST00000527003 DGKHQ86XP1 1220 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 WFDC3Q8IUB2 231 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 CILP2Q8IUL8 1156 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 ZSCAN29Q8IWY8 852 aaPredicted RBP4.47□□□□□ -1.69
C11orf54-204ENST00000527003 CRACR2BQ8N4Y2 399 aaPredicted RBP4.47□□□□□ -1.69
C11orf54-204ENST00000527003 C2CD4AQ8NCU7 369 aaPredicted RBP4.47□□□□□ -1.69
C11orf54-204ENST00000527003 ANKS1AQ92625 1134 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 MISP3Q96FF7 219 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 TTC14Q96N46 770 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 KIF2CQ99661 725 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 UBAC1Q9BSL1 405 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 DEFB129Q9H1M3 183 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 VEZTQ9HBM0 779 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 TOMM22Q9NS69 142 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 PGAP2Q9UHJ9 254 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 PALD1Q9ULE6 856 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 SYNPO2Q9UMS6 1093 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 LIMCH1Q9UPQ0 1083 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.47□□□□□ -1.69
C11orf54-204ENST00000527003 GOLGB1Q14789 3259 aaKnown RBP4.47□□□□□ -1.69
C11orf54-204ENST00000527003 COL4A5P29400 1685 aa4.47□□□□□ -1.69
C11orf54-204ENST00000527003 CACNA1SQ13698 1873 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 PNMA6FA0A0J9YX94 578 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 CCDC196A0A1B0GTZ2 297 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 TMEM238LA0A1B0GVL6 79 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 CLRN2A0PK11 232 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 UNCXA6NJT0 531 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 TSPY2A6NKD2 308 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 B8ZZF3 427 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 TCP10L2B9ZVM9 353 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 TREHO43280 583 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 PRC1O43663 620 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 RANBP6O60518 1105 aaKnown RBP4.46□□□□□ -1.7
C11orf54-204ENST00000527003 B3GALT4O96024 378 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 TSPY3P0CV98 308 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 TSPY8P0CW00 308 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 CALM1P0DP23 149 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 CALM2P0DP24 149 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 CALM3P0DP25 149 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 NF2P35240 595 aa4.46□□□□□ -1.7
C11orf54-204ENST00000527003 EPS15P42566 896 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms