RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 SAMD7Q7Z3H4 446 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 BAP1Q92560 729 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 SELENOOQ9BVL4 669 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 BMP2KQ9NSY1 1161 aaPredicted RBP13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 TMOD2Q9NZR1 351 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 ADAMTS1Q9UHI8 967 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 SNX12Q9UMY4 172 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 SUGT1Q9Y2Z0 365 aa13.19□□□□□ -0.3
CHMP1B-201ENST00000526991 MYH4Q9Y623 1939 aa13.18□□□□□ -0.3
CHMP1B-201ENST00000526991 PVALEFA0A1B0GWK0 134 aa13.18□□□□□ -0.3
CHMP1B-201ENST00000526991 CLSTN1O94985 981 aa13.18□□□□□ -0.3
CHMP1B-201ENST00000526991 SNHG28P0DPA3 235 aa13.18□□□□□ -0.3
CHMP1B-201ENST00000526991 LTBP1Q14766 1721 aa13.18□□□□□ -0.3
CHMP1B-201ENST00000526991 OSBPL9Q96SU4 736 aa13.18□□□□□ -0.3
CHMP1B-201ENST00000526991 COL4A3BPQ9Y5P4 624 aa13.18□□□□□ -0.3
CHMP1B-201ENST00000526991 MYH10P35580 1976 aa13.18□□□□□ -0.3
CHMP1B-201ENST00000526991 ESYT2A0FGR8 921 aa13.18□□□□□ -0.3
CHMP1B-201ENST00000526991 TLR2O60603 784 aa13.18□□□□□ -0.3
CHMP1B-201ENST00000526991 KCNA3P22001 575 aa13.18□□□□□ -0.3
CHMP1B-201ENST00000526991 CKAP4Q07065 602 aaKnown RBP13.18□□□□□ -0.3
CHMP1B-201ENST00000526991 TCERG1LQ5VWI1 586 aa13.18□□□□□ -0.3
CHMP1B-201ENST00000526991 CPXCR1Q8N123 301 aa13.18□□□□□ -0.3
CHMP1B-201ENST00000526991 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.18□□□□□ -0.3
CHMP1B-201ENST00000526991 CEP350Q5VT06 3117 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 SPDYE2BA6NHP3 402 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 SPDYE6P0CI01 402 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 FKBP3Q00688 224 aaKnown RBP13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 ADAM9Q13443 819 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 DCAF17Q5H9S7 520 aaPredicted RBP13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 PDXDC1Q6P996 788 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 SPATA4Q8NEY3 305 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 EXOC4Q96A65 974 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 CALR3Q96L12 384 aaKnown RBP13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 ZNF70Q9UC06 446 aaPredicted RBP13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 HPCAL4Q9UM19 191 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 RSPH10B2B2RC85 870 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 TRIM66O15016 1216 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 PRPF6O94906 941 aaKnown RBP13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 SYF2O95926 243 aaKnown RBP13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 RSPH10BP0C881 870 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 CXCL9Q07325 125 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 TMEM119Q4V9L6 283 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 WDR93Q6P2C0 686 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 RSBN1LQ6PCB5 846 aaPredicted RBP13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 TRIM58Q8NG06 486 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 IFT81Q8WYA0 676 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 SH2D3AQ9BRG2 576 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 SERPINA10Q9UK55 444 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 JRKLQ9Y4A0 524 aa13.17□□□□□ -0.3
CHMP1B-201ENST00000526991 DDX39AO00148 427 aaKnown RBP13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 CLIC2O15247 247 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 LRRC63Q05C16 580 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 PDIA5Q14554 519 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 TBC1D10BQ4KMP7 808 aaPredicted RBP13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 GPATCH4Q5T3I0 446 aaKnown RBP13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 CCNI2Q6ZMN8 369 aaPredicted RBP13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 LEKR1Q6ZMV7 388 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 SCFD1Q8WVM8 642 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 ANO3Q9BYT9 981 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 DHX36Q9H2U1 1008 aaKnown RBP13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 EMILIN3Q9NT22 766 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 RBM12Q9NTZ6 932 aaKnown RBP13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 COL4A5P29400 1685 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 A0A1W2PQJ5 194 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 ZBTB39O15060 712 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 NOL4O94818 638 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 FGFR1OPO95684 399 aaKnown RBP13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 BAG6P46379 1132 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 EHHADHQ08426 723 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 KCNA1Q09470 495 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 SFMBT2Q5VUG0 894 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 KSR1Q8IVT5 923 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 C10orf67Q8IYJ2 551 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 EHD4Q9H223 541 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 FEZ2Q9UHY8 353 aaPredicted RBP13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 CEP83Q9Y592 693 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 NRXN2Q9P2S2 1712 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 A0A087X0T9 212 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 PALMO75781 387 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 FAM228BP0C875 321 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 BMP3P12645 472 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 SLC9A1P19634 815 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 R3HDM1Q15032 1099 aaKnown RBP13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 TRADDQ15628 312 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 TMEM179Q6ZVK1 233 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 NIM1KQ8IY84 436 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 GOLGA6L1Q8N7Z2 621 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 ALS2CR12Q96Q35 445 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 MYCBPQ99417 103 aaPredicted RBP13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 IDI2Q9BXS1 227 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 RGL1Q9NZL6 768 aa13.16□□□□□ -0.3
CHMP1B-201ENST00000526991 LRRC37AA6NMS7 1700 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 CYP11B2P19099 503 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 NR2F2P24468 414 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 KLRC1P26715 233 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 ZNF76P36508 570 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 KIAA0753Q2KHM9 967 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 ARSHQ5FYA8 562 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 HGSNATQ68CP4 663 aa13.15□□□□□ -0.3
CHMP1B-201ENST00000526991 GJB7Q6PEY0 223 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms