RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 TOP3AQ13472 1001 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-219ENST00000526299 ZNF627Q7L945 461 aa4.72□□□□□ -1.65
ECHDC1-219ENST00000526299 UHMK1Q8TAS1 419 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-219ENST00000526299 AGAP2Q99490 1192 aa4.72□□□□□ -1.65
ECHDC1-219ENST00000526299 C12orf65Q9H3J6 166 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-219ENST00000526299 SLC39A2Q9NP94 309 aa4.72□□□□□ -1.65
ECHDC1-219ENST00000526299 STRIP2Q9ULQ0 834 aa4.72□□□□□ -1.65
ECHDC1-219ENST00000526299 ACOT7O00154 380 aa4.71□□□□□ -1.66
ECHDC1-219ENST00000526299 NKRFO15226 690 aaKnown RBP eCLIP4.71□□□□□ -1.66
ECHDC1-219ENST00000526299 PPFIA2O75334 1257 aa4.71□□□□□ -1.66
ECHDC1-219ENST00000526299 CAPNS1P04632 268 aa4.71□□□□□ -1.66
ECHDC1-219ENST00000526299 FOXL1Q12952 345 aa4.71□□□□□ -1.66
ECHDC1-219ENST00000526299 TBR1Q16650 682 aa4.71□□□□□ -1.66
ECHDC1-219ENST00000526299 TMCO4Q5TGY1 634 aa4.71□□□□□ -1.66
ECHDC1-219ENST00000526299 MRM1Q6IN84 353 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-219ENST00000526299 ZNF483Q8TF39 744 aaPredicted RBP4.71□□□□□ -1.66
ECHDC1-219ENST00000526299 CRAMP1Q96RY5 1269 aa4.71□□□□□ -1.66
ECHDC1-219ENST00000526299 KCNJ15Q99712 375 aa4.71□□□□□ -1.66
ECHDC1-219ENST00000526299 PDGFDQ9GZP0 370 aaPredicted RBP4.71□□□□□ -1.66
ECHDC1-219ENST00000526299 ACBD3Q9H3P7 528 aa4.71□□□□□ -1.66
ECHDC1-219ENST00000526299 GPR27Q9NS67 375 aa4.71□□□□□ -1.66
ECHDC1-219ENST00000526299 INPP5FQ9Y2H2 1132 aa4.71□□□□□ -1.66
ECHDC1-219ENST00000526299 NR2E1Q9Y466 385 aa4.71□□□□□ -1.66
ECHDC1-219ENST00000526299 CUTAO60888 179 aa4.7□□□□□ -1.66
ECHDC1-219ENST00000526299 VAMP1P23763 118 aa4.7□□□□□ -1.66
ECHDC1-219ENST00000526299 HIBADHP31937 336 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-219ENST00000526299 ZMAT1Q5H9K5 638 aa4.7□□□□□ -1.66
ECHDC1-219ENST00000526299 PCSK4Q6UW60 755 aa4.7□□□□□ -1.66
ECHDC1-219ENST00000526299 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-219ENST00000526299 MRGPRGQ86SM5 289 aa4.7□□□□□ -1.66
ECHDC1-219ENST00000526299 PHF20Q9BVI0 1012 aa4.7□□□□□ -1.66
ECHDC1-219ENST00000526299 TLR9Q9NR96 1032 aa4.7□□□□□ -1.66
ECHDC1-219ENST00000526299 ACTR10Q9NZ32 417 aa4.7□□□□□ -1.66
ECHDC1-219ENST00000526299 DMRT1Q9Y5R6 373 aa4.7□□□□□ -1.66
ECHDC1-219ENST00000526299 GNAT1P11488 350 aa4.69□□□□□ -1.66
ECHDC1-219ENST00000526299 MAKP20794 623 aa4.69□□□□□ -1.66
ECHDC1-219ENST00000526299 GRK2P25098 689 aa4.69□□□□□ -1.66
ECHDC1-219ENST00000526299 MSX2P35548 267 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-219ENST00000526299 GRK3P35626 688 aa4.69□□□□□ -1.66
ECHDC1-219ENST00000526299 MAP4K2Q12851 820 aa4.69□□□□□ -1.66
ECHDC1-219ENST00000526299 USP53Q70EK8 1073 aa4.69□□□□□ -1.66
ECHDC1-219ENST00000526299 KCTD13Q8WZ19 329 aa4.69□□□□□ -1.66
ECHDC1-219ENST00000526299 CLIP3Q96DZ5 547 aa4.69□□□□□ -1.66
ECHDC1-219ENST00000526299 DSEQ9UL01 958 aa4.69□□□□□ -1.66
ECHDC1-219ENST00000526299 ARHGAP6O43182 974 aa4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 DLX3O60479 287 aa4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 ATF4P18848 351 aaPredicted RBP4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 RPS19P39019 145 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 ETV4P43268 484 aa4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 PPP2R2AP63151 447 aa4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 SPIRE1Q08AE8 756 aa4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 HABP4Q5JVS0 413 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 DPY19L2P1Q6NXN4 242 aa4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 KCTD1Q719H9 257 aa4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 MICAL1Q8TDZ2 1067 aa4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 CFHR4Q92496 578 aa4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 IER2Q9BTL4 223 aa4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 CD244Q9BZW8 370 aa4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 KIAA1683Q9H0B3 1180 aa4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 SLC2A4RGQ9NR83 387 aa4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 CEP72Q9P209 647 aa4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 REXO2Q9Y3B8 237 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 NUB1Q9Y5A7 615 aa4.68□□□□□ -1.66
ECHDC1-219ENST00000526299 SSBP05455 408 aaKnown RBP eCLIP4.67□□□□□ -1.66
ECHDC1-219ENST00000526299 PDE6AP16499 860 aa4.67□□□□□ -1.66
ECHDC1-219ENST00000526299 KRT4P19013 534 aa4.67□□□□□ -1.66
ECHDC1-219ENST00000526299 EPHA5P54756 1037 aa4.67□□□□□ -1.66
ECHDC1-219ENST00000526299 NFYCQ13952 458 aa4.67□□□□□ -1.66
ECHDC1-219ENST00000526299 FXNQ16595 210 aa4.67□□□□□ -1.66
ECHDC1-219ENST00000526299 KCNT2Q6UVM3 1135 aa4.67□□□□□ -1.66
ECHDC1-219ENST00000526299 Q6ZPA2 131 aa4.67□□□□□ -1.66
ECHDC1-219ENST00000526299 LARP4Q71RC2 724 aaKnown RBP eCLIP4.67□□□□□ -1.66
ECHDC1-219ENST00000526299 SCYL1Q96KG9 808 aa4.67□□□□□ -1.66
ECHDC1-219ENST00000526299 WDR26Q9H7D7 661 aa4.67□□□□□ -1.66
ECHDC1-219ENST00000526299 ZNF703Q9H7S9 590 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-219ENST00000526299 PLA2G3Q9NZ20 509 aa4.67□□□□□ -1.66
ECHDC1-219ENST00000526299 HECAQ9UBI9 543 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-219ENST00000526299 PUF60Q9UHX1 559 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-219ENST00000526299 AGRPO00253 132 aa4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 RAMP2O60895 175 aa4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 DNAJA1P31689 397 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 ADCY8P40145 1251 aa4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 KCNQ1P51787 676 aa4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 DBPQ10586 325 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 SLC10A6Q3KNW5 377 aa4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 WDR72Q3MJ13 1102 aa4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 TNNI3KQ59H18 835 aa4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 RSPO2Q6UXX9 243 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 DPP8Q6V1X1 898 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 LBX2Q6XYB7 198 aa4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 SGMS1Q86VZ5 419 aa4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 VPS37DQ86XT2 251 aa4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 TTPALQ9BTX7 342 aa4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 ZDHHC5Q9C0B5 715 aa4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 TGIF2Q9GZN2 237 aa4.66□□□□□ -1.66
ECHDC1-219ENST00000526299 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.65□□□□□ -1.67
ECHDC1-219ENST00000526299 A0A1W2PQU0 124 aa4.65□□□□□ -1.67
ECHDC1-219ENST00000526299 HMGCRP04035 888 aa4.65□□□□□ -1.67
ECHDC1-219ENST00000526299 ETFBP38117 255 aa4.65□□□□□ -1.67
ECHDC1-219ENST00000526299 MFAP1P55081 439 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms