RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 SETD4Q9NVD3 440 aa22.36■■□□□ 1.17
EXOSC4-202ENST00000525936 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.36■■□□□ 1.17
EXOSC4-202ENST00000525936 WNT7AO00755 349 aa22.35■■□□□ 1.17
EXOSC4-202ENST00000525936 GAS7O60861 476 aa22.35■■□□□ 1.17
EXOSC4-202ENST00000525936 CSF2RAP15509 400 aa22.35■■□□□ 1.17
EXOSC4-202ENST00000525936 GJB2P29033 226 aa22.35■■□□□ 1.17
EXOSC4-202ENST00000525936 MIS18BP1Q6P0N0 1132 aa22.35■■□□□ 1.17
EXOSC4-202ENST00000525936 TMEM199Q8N511 208 aa22.35■■□□□ 1.17
EXOSC4-202ENST00000525936 CAGE1Q8TC20 777 aa22.35■■□□□ 1.17
EXOSC4-202ENST00000525936 WNT8BQ93098 351 aa22.35■■□□□ 1.17
EXOSC4-202ENST00000525936 NOD1Q9Y239 953 aa22.35■■□□□ 1.17
EXOSC4-202ENST00000525936 KIF3AQ9Y496 699 aa22.35■■□□□ 1.17
EXOSC4-202ENST00000525936 MAFBQ9Y5Q3 323 aaPredicted RBP22.35■■□□□ 1.17
EXOSC4-202ENST00000525936 TRIP12Q14669 1992 aaPredicted RBP22.35■■□□□ 1.17
EXOSC4-202ENST00000525936 WDR64B1ANS9 1081 aa22.34■■□□□ 1.17
EXOSC4-202ENST00000525936 TREHO43280 583 aa22.34■■□□□ 1.17
EXOSC4-202ENST00000525936 GNAT1P11488 350 aa22.34■■□□□ 1.17
EXOSC4-202ENST00000525936 ATP4AP20648 1035 aa22.34■■□□□ 1.17
EXOSC4-202ENST00000525936 MARK3P27448 753 aa22.34■■□□□ 1.17
EXOSC4-202ENST00000525936 BFSP2Q13515 415 aa22.34■■□□□ 1.17
EXOSC4-202ENST00000525936 PLCB4Q15147 1175 aa22.34■■□□□ 1.17
EXOSC4-202ENST00000525936 MARCH8Q5T0T0 291 aa22.34■■□□□ 1.17
EXOSC4-202ENST00000525936 SWSAP1Q6NVH7 229 aa22.34■■□□□ 1.17
EXOSC4-202ENST00000525936 NOSTRINQ8IVI9 506 aa22.34■■□□□ 1.17
EXOSC4-202ENST00000525936 TDHQ8IZJ6 230 aa22.34■■□□□ 1.17
EXOSC4-202ENST00000525936 LMBR1Q8WVP7 490 aa22.34■■□□□ 1.17
EXOSC4-202ENST00000525936 ATP6V0A1Q93050 837 aa22.34■■□□□ 1.17
EXOSC4-202ENST00000525936 SNX21Q969T3 373 aa22.34■■□□□ 1.17
EXOSC4-202ENST00000525936 TEKT3Q9BXF9 490 aa22.34■■□□□ 1.17
EXOSC4-202ENST00000525936 UNC45AQ9H3U1 944 aa22.34■■□□□ 1.17
EXOSC4-202ENST00000525936 MBLAC1A4D2B0 266 aaPredicted RBP22.33■■□□□ 1.17
EXOSC4-202ENST00000525936 KIF28PB7ZC32 967 aa22.33■■□□□ 1.17
EXOSC4-202ENST00000525936 PSAPP07602 524 aa22.33■■□□□ 1.17
EXOSC4-202ENST00000525936 IQCF3P0C7M6 154 aa22.33■■□□□ 1.17
EXOSC4-202ENST00000525936 SFNP31947 248 aa22.33■■□□□ 1.17
EXOSC4-202ENST00000525936 CCL23P55773 120 aa22.33■■□□□ 1.17
EXOSC4-202ENST00000525936 TRAF7Q6Q0C0 670 aa22.33■■□□□ 1.17
EXOSC4-202ENST00000525936 POTEDQ86YR6 584 aa22.33■■□□□ 1.17
EXOSC4-202ENST00000525936 RDM1Q8NG50 284 aa22.33■■□□□ 1.17
EXOSC4-202ENST00000525936 ZNF302Q9NR11 478 aa22.33■■□□□ 1.17
EXOSC4-202ENST00000525936 DISC1Q9NRI5 854 aa22.33■■□□□ 1.17
EXOSC4-202ENST00000525936 VAV3Q9UKW4 847 aa22.33■■□□□ 1.17
EXOSC4-202ENST00000525936 SMC3Q9UQE7 1217 aa22.33■■□□□ 1.17
EXOSC4-202ENST00000525936 INSRRP14616 1297 aa22.32■■□□□ 1.16
EXOSC4-202ENST00000525936 JAK3P52333 1124 aa22.32■■□□□ 1.16
EXOSC4-202ENST00000525936 PPFIA1Q13136 1202 aa22.32■■□□□ 1.16
EXOSC4-202ENST00000525936 PPP2R5CQ13362 524 aa22.32■■□□□ 1.16
EXOSC4-202ENST00000525936 PPIGQ13427 754 aaKnown RBP eCLIP22.32■■□□□ 1.16
EXOSC4-202ENST00000525936 GRIK4Q16099 956 aa22.32■■□□□ 1.16
EXOSC4-202ENST00000525936 FAM160B1Q5W0V3 765 aa22.32■■□□□ 1.16
EXOSC4-202ENST00000525936 CCDC155Q8N6L0 562 aa22.32■■□□□ 1.16
EXOSC4-202ENST00000525936 ATP8B4Q8TF62 1192 aa22.32■■□□□ 1.16
EXOSC4-202ENST00000525936 POTEB3A0JP26 581 aa22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 RRN3P2A6NIE6 340 aa22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 BACH1O14867 736 aa22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 CKBP12277 381 aa22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 GPNMBQ14956 572 aa22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 SHHQ15465 462 aa22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 C9orf50Q5SZB4 431 aa22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 PDXDC2PQ6P474 469 aa22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 POTEBQ6S5H4 581 aa22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 RPAINQ86UA6 219 aa22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 RETREG2Q8NC44 543 aa22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 TNPO1Q92973 898 aaKnown RBP22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 INTS4Q96HW7 963 aaKnown RBP22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 SCLYQ96I15 445 aa22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 MTMR9Q96QG7 549 aa22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 IL23AQ9NPF7 189 aa22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 TCEAL9Q9UHQ7 104 aa22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 IGSF9BQ9UPX0 1349 aa22.31■■□□□ 1.16
EXOSC4-202ENST00000525936 K7ELQ4 463 aaPredicted RBP22.3■■□□□ 1.16
EXOSC4-202ENST00000525936 SELPP16109 830 aa22.3■■□□□ 1.16
EXOSC4-202ENST00000525936 RFC2P35250 354 aa22.3■■□□□ 1.16
EXOSC4-202ENST00000525936 TRAPPC10P48553 1259 aa22.3■■□□□ 1.16
EXOSC4-202ENST00000525936 SPIRE1Q08AE8 756 aa22.3■■□□□ 1.16
EXOSC4-202ENST00000525936 LRIT3Q3SXY7 679 aa22.3■■□□□ 1.16
EXOSC4-202ENST00000525936 TMEM240Q5SV17 173 aa22.3■■□□□ 1.16
EXOSC4-202ENST00000525936 SLFN12Q8IYM2 578 aa22.3■■□□□ 1.16
EXOSC4-202ENST00000525936 GABBR1Q9UBS5 961 aa22.3■■□□□ 1.16
EXOSC4-202ENST00000525936 SAMM50Q9Y512 469 aa22.3■■□□□ 1.16
EXOSC4-202ENST00000525936 SZT2Q5T011 3432 aa22.3■■□□□ 1.16
EXOSC4-202ENST00000525936 KAT6AQ92794 2004 aa22.3■■□□□ 1.16
EXOSC4-202ENST00000525936 ZBTB42B2RXF5 422 aa22.29■■□□□ 1.16
EXOSC4-202ENST00000525936 EML1O00423 815 aa22.29■■□□□ 1.16
EXOSC4-202ENST00000525936 ZNF862O60290 1169 aa22.29■■□□□ 1.16
EXOSC4-202ENST00000525936 HBP1O60381 514 aa22.29■■□□□ 1.16
EXOSC4-202ENST00000525936 CAND2O75155 1236 aa22.29■■□□□ 1.16
EXOSC4-202ENST00000525936 ORC2Q13416 577 aaPredicted RBP22.29■■□□□ 1.16
EXOSC4-202ENST00000525936 RASIP1Q5U651 963 aa22.29■■□□□ 1.16
EXOSC4-202ENST00000525936 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.29■■□□□ 1.165e-8■■□□□ 12.8
EXOSC4-202ENST00000525936 WDR81Q562E7 1941 aa22.29■■□□□ 1.16
EXOSC4-202ENST00000525936 CHMP2AO43633 222 aa22.28■■□□□ 1.16
EXOSC4-202ENST00000525936 NEMFO60524 1076 aa22.28■■□□□ 1.16
EXOSC4-202ENST00000525936 TOB1P50616 345 aaPredicted RBP22.28■■□□□ 1.16
EXOSC4-202ENST00000525936 ZNF618Q5T7W0 954 aa22.28■■□□□ 1.16
EXOSC4-202ENST00000525936 LARP1BQ659C4 914 aaKnown RBP22.28■■□□□ 1.16
EXOSC4-202ENST00000525936 LRRC8DQ7L1W4 858 aa22.28■■□□□ 1.16
EXOSC4-202ENST00000525936 MIER3Q7Z3K6 550 aa22.28■■□□□ 1.16
EXOSC4-202ENST00000525936 RPUSD2Q8IZ73 545 aaKnown RBP22.28■■□□□ 1.16
EXOSC4-202ENST00000525936 BBXQ8WY36 941 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms