RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 GYS1P13807 737 aa6.63□□□□□ -1.35
SVIP-202ENST00000525670 DDR1Q08345 913 aa6.63□□□□□ -1.35
SVIP-202ENST00000525670 TMEM62Q0P6H9 643 aa6.63□□□□□ -1.35
SVIP-202ENST00000525670 AIMP1Q12904 312 aaKnown RBP6.63□□□□□ -1.35
SVIP-202ENST00000525670 COL24A1Q17RW2 1714 aa6.63□□□□□ -1.35
SVIP-202ENST00000525670 RTP2Q5QGT7 225 aa6.63□□□□□ -1.35
SVIP-202ENST00000525670 CWF19L1Q69YN2 538 aaKnown RBP6.63□□□□□ -1.35
SVIP-202ENST00000525670 NPM2Q86SE8 214 aaKnown RBP6.63□□□□□ -1.35
SVIP-202ENST00000525670 CARMIL3Q8ND23 1372 aa6.63□□□□□ -1.35
SVIP-202ENST00000525670 RNF34Q969K3 372 aa6.63□□□□□ -1.35
SVIP-202ENST00000525670 SLC12A9Q9BXP2 914 aa6.63□□□□□ -1.35
SVIP-202ENST00000525670 PARD6AQ9NPB6 346 aa6.63□□□□□ -1.35
SVIP-202ENST00000525670 KLHL14Q9P2G3 628 aa6.63□□□□□ -1.35
SVIP-202ENST00000525670 COL11A2P13942 1736 aaPredicted RBP6.62□□□□□ -1.35
SVIP-202ENST00000525670 TNRC6CQ9HCJ0 1690 aaKnown RBP6.62□□□□□ -1.35
SVIP-202ENST00000525670 FANCIQ9NVI1 1328 aa6.62□□□□□ -1.35
SVIP-202ENST00000525670 NPHP1O15259 732 aa6.62□□□□□ -1.35
SVIP-202ENST00000525670 GSTM1P09488 218 aa6.62□□□□□ -1.35
SVIP-202ENST00000525670 BMP7P18075 431 aa6.62□□□□□ -1.35
SVIP-202ENST00000525670 GPTP24298 496 aa6.62□□□□□ -1.35
SVIP-202ENST00000525670 EPHB3P54753 998 aa6.62□□□□□ -1.35
SVIP-202ENST00000525670 CTSWP56202 376 aa6.62□□□□□ -1.35
SVIP-202ENST00000525670 CBX2Q14781 532 aaPredicted RBP6.62□□□□□ -1.35
SVIP-202ENST00000525670 NOL9Q5SY16 702 aaKnown RBP6.62□□□□□ -1.35
SVIP-202ENST00000525670 FBXW10Q5XX13 1052 aa6.62□□□□□ -1.35
SVIP-202ENST00000525670 TTLL7Q6ZT98 887 aa6.62□□□□□ -1.35
SVIP-202ENST00000525670 TSPYL6Q8N831 410 aa6.62□□□□□ -1.35
SVIP-202ENST00000525670 NUP43Q8NFH3 380 aa6.62□□□□□ -1.35
SVIP-202ENST00000525670 JMJD8Q96S16 334 aa6.62□□□□□ -1.35
SVIP-202ENST00000525670 SRRTQ9BXP5 876 aaKnown RBP6.62□□□□□ -1.35
SVIP-202ENST00000525670 CHPF2Q9P2E5 772 aa6.62□□□□□ -1.35
SVIP-202ENST00000525670 PCDHGB7Q9Y5F8 929 aa6.62□□□□□ -1.35
SVIP-202ENST00000525670 ARFGEF2Q9Y6D5 1785 aa6.62□□□□□ -1.35
SVIP-202ENST00000525670 KIAA1551Q9HCM1 1747 aa6.62□□□□□ -1.35
SVIP-202ENST00000525670 PI3P19957 117 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 HOXA5P20719 270 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 GUCY2CP25092 1073 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 NOP2P46087 812 aaKnown RBP6.61□□□□□ -1.35
SVIP-202ENST00000525670 ZNF445P59923 1031 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 GNAI1P63096 354 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 RACK1P63244 317 aaKnown RBP6.61□□□□□ -1.35
SVIP-202ENST00000525670 RAB3GAP1Q15042 981 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 HLFQ16534 295 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 AXDND1Q5T1B0 1012 aaPredicted RBP6.61□□□□□ -1.35
SVIP-202ENST00000525670 TDRD10Q5VZ19 366 aaKnown RBP6.61□□□□□ -1.35
SVIP-202ENST00000525670 HLA-DQA1Q5Y7H0 255 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 TBC1D9BQ66K14 1250 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 DCAF15Q66K64 600 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 KIF6Q6ZMV9 814 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 UNC5AQ6ZN44 842 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 PPFIBP1Q86W92 1011 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 C8orf58Q8NAV2 365 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 PANK1Q8TE04 598 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 MZB1Q8WU39 189 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 DACT3Q96B18 629 aaPredicted RBP6.61□□□□□ -1.35
SVIP-202ENST00000525670 ZCCHC4Q9H5U6 513 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 GP6Q9HCN6 339 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 TNFRSF12AQ9NP84 129 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 IFT57Q9NWB7 429 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 IMPACTQ9P2X3 320 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 DDX41Q9UJV9 622 aaKnown RBP6.61□□□□□ -1.35
SVIP-202ENST00000525670 PPT2Q9UMR5 302 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 ANKRD31Q8N7Z5 1873 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 NUP98P52948 1817 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 ANKRD36CQ5JPF3 1778 aa6.61□□□□□ -1.35
SVIP-202ENST00000525670 C10orf71Q711Q0 1435 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 CCER2I3L3R5 266 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 CHL1O00533 1208 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 IRS4O14654 1257 aaPredicted RBP6.6□□□□□ -1.35
SVIP-202ENST00000525670 CAMTA2O94983 1202 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 TP53P04637 393 aaPredicted RBP6.6□□□□□ -1.35
SVIP-202ENST00000525670 CD247P20963 164 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 CHRNA5P30532 468 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 IL6STP40189 918 aaPredicted RBP6.6□□□□□ -1.35
SVIP-202ENST00000525670 CDR1P51861 262 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 EIF5P55010 431 aaKnown RBP6.6□□□□□ -1.35
SVIP-202ENST00000525670 COL9A2Q14055 689 aaPredicted RBP6.6□□□□□ -1.35
SVIP-202ENST00000525670 NFIXQ14938 502 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 ZYXQ15942 572 aaKnown RBP6.6□□□□□ -1.35
SVIP-202ENST00000525670 RUFY4Q6ZNE9 571 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 LDHDQ86WU2 507 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 NAT16Q8N8M0 369 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 BRF1Q92994 677 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 YTHDC1Q96MU7 727 aaKnown RBP6.6□□□□□ -1.35
SVIP-202ENST00000525670 KCNC2Q96PR1 638 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 SYT17Q9BSW7 474 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 NARFQ9UHQ1 456 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 FHOD1Q9Y613 1164 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 PXDNLA1KZ92 1463 aa6.6□□□□□ -1.35
SVIP-202ENST00000525670 A0A1W2PQ27 194 aa6.59□□□□□ -1.35
SVIP-202ENST00000525670 A0A1W2PQ64 194 aa6.59□□□□□ -1.35
SVIP-202ENST00000525670 A0A1W2PQC6 194 aa6.59□□□□□ -1.35
SVIP-202ENST00000525670 A0A1W2PQD8 194 aa6.59□□□□□ -1.35
SVIP-202ENST00000525670 H0Y8X5 98 aa6.59□□□□□ -1.35
SVIP-202ENST00000525670 POLRMTO00411 1230 aaKnown RBP6.59□□□□□ -1.35
SVIP-202ENST00000525670 PRRG2O14669 202 aa6.59□□□□□ -1.35
SVIP-202ENST00000525670 MVKQ03426 396 aa6.59□□□□□ -1.35
SVIP-202ENST00000525670 CALD1Q05682 793 aaKnown RBP6.59□□□□□ -1.35
SVIP-202ENST00000525670 EXOSC9Q06265 439 aaKnown RBP6.59□□□□□ -1.35
SVIP-202ENST00000525670 TMC6Q7Z403 805 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms