RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 PDCD2LQ9BRP1 358 aa16.91■□□□□ 0.3
BEST1-204ENST00000524926 LXNQ9BS40 222 aa16.91■□□□□ 0.3
BEST1-204ENST00000524926 MRPL44Q9H9J2 332 aaKnown RBP16.91■□□□□ 0.3
BEST1-204ENST00000524926 HOXC10Q9NYD6 342 aa16.91■□□□□ 0.3
BEST1-204ENST00000524926 WRAP73Q9P2S5 460 aaPredicted RBP16.91■□□□□ 0.3
BEST1-204ENST00000524926 ZNF214Q9UL59 606 aaPredicted RBP16.91■□□□□ 0.3
BEST1-204ENST00000524926 ADAMTS5Q9UNA0 930 aa16.91■□□□□ 0.3
BEST1-204ENST00000524926 LUC7L2Q9Y383 392 aaKnown RBP16.91■□□□□ 0.3
BEST1-204ENST00000524926 COL4A3BPQ9Y5P4 624 aa16.91■□□□□ 0.3
BEST1-204ENST00000524926 PHIPQ8WWQ0 1821 aa16.91■□□□□ 0.3
BEST1-204ENST00000524926 MUTP22033 750 aa16.91■□□□□ 0.3
BEST1-204ENST00000524926 KLK7P49862 253 aa16.91■□□□□ 0.3
BEST1-204ENST00000524926 ITGB3BPQ13352 177 aaPredicted RBP16.91■□□□□ 0.3
BEST1-204ENST00000524926 MAN2A1Q16706 1144 aa16.91■□□□□ 0.3
BEST1-204ENST00000524926 RAD9BQ6WBX8 426 aa16.91■□□□□ 0.3
BEST1-204ENST00000524926 SYT10Q6XYQ8 523 aa16.91■□□□□ 0.3
BEST1-204ENST00000524926 NDST4Q9H3R1 872 aa16.91■□□□□ 0.3
BEST1-204ENST00000524926 CSADQ9Y600 493 aa16.91■□□□□ 0.3
BEST1-204ENST00000524926 SNCAIPQ9Y6H5 919 aa16.91■□□□□ 0.3
BEST1-204ENST00000524926 PARP14Q460N5 1801 aa16.91■□□□□ 0.3
BEST1-204ENST00000524926 TESPA1A2RU30 521 aaPredicted RBP16.9■□□□□ 0.3
BEST1-204ENST00000524926 C1orf186Q6ZWK4 172 aa16.9■□□□□ 0.3
BEST1-204ENST00000524926 RBM46Q8TBY0 533 aaKnown RBP16.9■□□□□ 0.3
BEST1-204ENST00000524926 KCTD10Q9H3F6 313 aa16.9■□□□□ 0.3
BEST1-204ENST00000524926 BCAS3Q9H6U6 928 aa16.9■□□□□ 0.3
BEST1-204ENST00000524926 FRMPD4Q14CM0 1322 aa16.9■□□□□ 0.3
BEST1-204ENST00000524926 COL11A1P12107 1806 aaPredicted RBP16.9■□□□□ 0.3
BEST1-204ENST00000524926 DHX15O43143 795 aaKnown RBP16.9■□□□□ 0.3
BEST1-204ENST00000524926 FAM13AO94988 1023 aa16.9■□□□□ 0.3
BEST1-204ENST00000524926 TSR1Q2NL82 804 aaKnown RBP16.9■□□□□ 0.3
BEST1-204ENST00000524926 CCDC40Q4G0X9 1142 aa16.9■□□□□ 0.3
BEST1-204ENST00000524926 TMTC1Q8IUR5 882 aa16.9■□□□□ 0.3
BEST1-204ENST00000524926 OR8K1Q8NGG5 319 aa16.9■□□□□ 0.3
BEST1-204ENST00000524926 NUP58Q9BVL2 599 aa16.9■□□□□ 0.3
BEST1-204ENST00000524926 TEX13BQ9BXU2 312 aa16.9■□□□□ 0.3
BEST1-204ENST00000524926 CAPN11Q9UMQ6 739 aa16.9■□□□□ 0.3
BEST1-204ENST00000524926 PRPF6O94906 941 aaKnown RBP16.89■□□□□ 0.29
BEST1-204ENST00000524926 GCNT3O95395 438 aa16.89■□□□□ 0.29
BEST1-204ENST00000524926 CCDC175P0C221 793 aa16.89■□□□□ 0.29
BEST1-204ENST00000524926 MYBP10242 640 aa16.89■□□□□ 0.29
BEST1-204ENST00000524926 ADAM9Q13443 819 aa16.89■□□□□ 0.29
BEST1-204ENST00000524926 MYCT1Q8N699 235 aa16.89■□□□□ 0.29
BEST1-204ENST00000524926 NEK9Q8TD19 979 aa16.89■□□□□ 0.29
BEST1-204ENST00000524926 CNKSR2Q8WXI2 1034 aa16.89■□□□□ 0.29
BEST1-204ENST00000524926 TBC1D22BQ9NU19 505 aa16.89■□□□□ 0.29
BEST1-204ENST00000524926 RLFQ13129 1914 aa16.89■□□□□ 0.29
BEST1-204ENST00000524926 TUBB4AP04350 444 aa16.89■□□□□ 0.29
BEST1-204ENST00000524926 P4HBP07237 508 aaKnown RBP16.89■□□□□ 0.29
BEST1-204ENST00000524926 KNOP1Q1ED39 458 aaKnown RBP16.89■□□□□ 0.29
BEST1-204ENST00000524926 DPY19L2Q6NUT2 758 aa16.89■□□□□ 0.29
BEST1-204ENST00000524926 CYP26C1Q6V0L0 522 aa16.89■□□□□ 0.29
BEST1-204ENST00000524926 RETREG2Q8NC44 543 aa16.89■□□□□ 0.29
BEST1-204ENST00000524926 CEP63Q96MT8 703 aa16.89■□□□□ 0.29
BEST1-204ENST00000524926 ERGIC2Q96RQ1 377 aa16.89■□□□□ 0.29
BEST1-204ENST00000524926 ARHGEF35A5YM69 484 aa16.88■□□□□ 0.29
BEST1-204ENST00000524926 GOLGA6L9A6NEM1 432 aa16.88■□□□□ 0.29
BEST1-204ENST00000524926 SPDYE16A6NNV3 312 aaPredicted RBP16.88■□□□□ 0.29
BEST1-204ENST00000524926 GAP43P17677 238 aa16.88■□□□□ 0.29
BEST1-204ENST00000524926 ETF1P62495 437 aaKnown RBP16.88■□□□□ 0.29
BEST1-204ENST00000524926 ERVK-24P63145 666 aa16.88■□□□□ 0.29
BEST1-204ENST00000524926 SH3D19Q5HYK7 790 aa16.88■□□□□ 0.29
BEST1-204ENST00000524926 AGPAT5Q9NUQ2 364 aa16.88■□□□□ 0.29
BEST1-204ENST00000524926 RBBP6Q7Z6E9 1792 aaKnown RBP16.88■□□□□ 0.29
BEST1-204ENST00000524926 RASSF10A6NK89 507 aa16.88■□□□□ 0.29
BEST1-204ENST00000524926 ATP9AO75110 1047 aa16.88■□□□□ 0.29
BEST1-204ENST00000524926 NR3C2P08235 984 aa16.88■□□□□ 0.29
BEST1-204ENST00000524926 FECHP22830 423 aa16.88■□□□□ 0.29
BEST1-204ENST00000524926 PPP4R3CPQ6ZMV5 832 aa16.88■□□□□ 0.29
BEST1-204ENST00000524926 EPM2AIP1Q7L775 607 aaPredicted RBP16.88■□□□□ 0.29
BEST1-204ENST00000524926 ZSWIM4Q9H7M6 989 aa16.88■□□□□ 0.29
BEST1-204ENST00000524926 ACAD9Q9H845 621 aa16.88■□□□□ 0.29
BEST1-204ENST00000524926 TCEAL9Q9UHQ7 104 aa16.88■□□□□ 0.29
BEST1-204ENST00000524926 DNAI1Q9UI46 699 aa16.88■□□□□ 0.29
BEST1-204ENST00000524926 ADGRG1Q9Y653 693 aa16.88■□□□□ 0.29
BEST1-204ENST00000524926 DYNC1I1O14576 645 aa16.87■□□□□ 0.29
BEST1-204ENST00000524926 ATP2A1O14983 1001 aa16.87■□□□□ 0.29
BEST1-204ENST00000524926 CETN3O15182 167 aa16.87■□□□□ 0.29
BEST1-204ENST00000524926 GNA14O95837 355 aa16.87■□□□□ 0.29
BEST1-204ENST00000524926 CCND2P30279 289 aa16.87■□□□□ 0.29
BEST1-204ENST00000524926 IREB2P48200 963 aaKnown RBP16.87■□□□□ 0.29
BEST1-204ENST00000524926 TREML2Q5T2D2 321 aa16.87■□□□□ 0.29
BEST1-204ENST00000524926 NSUN6Q8TEA1 469 aaKnown RBP16.87■□□□□ 0.29
BEST1-204ENST00000524926 PARVGQ9HBI0 331 aa16.87■□□□□ 0.29
BEST1-204ENST00000524926 NR2F2P24468 414 aa16.87■□□□□ 0.29
BEST1-204ENST00000524926 GTF2F1P35269 517 aaKnown RBP eCLIP16.87■□□□□ 0.29
BEST1-204ENST00000524926 EDRF1Q3B7T1 1238 aa16.87■□□□□ 0.29
BEST1-204ENST00000524926 TRIM65Q6PJ69 517 aa16.87■□□□□ 0.29
BEST1-204ENST00000524926 VSIG10LQ86VR7 867 aa16.87■□□□□ 0.29
BEST1-204ENST00000524926 DNAJC7Q99615 494 aa16.87■□□□□ 0.29
BEST1-204ENST00000524926 CHP1Q99653 195 aa16.87■□□□□ 0.29
BEST1-204ENST00000524926 TTYH3Q9C0H2 523 aa16.87■□□□□ 0.29
BEST1-204ENST00000524926 MMRN2Q9H8L6 949 aa16.87■□□□□ 0.29
BEST1-204ENST00000524926 OLFML3Q9NRN5 406 aa16.87■□□□□ 0.29
BEST1-204ENST00000524926 HOXD13P35453 343 aa16.86■□□□□ 0.29
BEST1-204ENST00000524926 QARSP47897 775 aaKnown RBP16.86■□□□□ 0.29
BEST1-204ENST00000524926 TTLL12Q14166 644 aaPredicted RBP16.86■□□□□ 0.29
BEST1-204ENST00000524926 TRMT1LQ7Z2T5 733 aaKnown RBP16.86■□□□□ 0.29
BEST1-204ENST00000524926 ZNF397Q8NF99 534 aaPredicted RBP16.86■□□□□ 0.29
BEST1-204ENST00000524926 TSC1Q92574 1164 aa16.86■□□□□ 0.29
BEST1-204ENST00000524926 ELP3Q9H9T3 547 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms