RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 ZNF274Q96GC6 653 aaPredicted RBP7.47□□□□□ -1.21
NUP98-213ENST00000524563 ZFP91Q96JP5 570 aaPredicted RBP7.47□□□□□ -1.21
NUP98-213ENST00000524563 SAMD11Q96NU1 681 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 C17orf80Q9BSJ5 609 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 LRFN3Q9BTN0 628 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 EPHX3Q9H6B9 360 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 CHMP5Q9NZZ3 219 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 TPCN1Q9ULQ1 816 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 FRMPD4Q14CM0 1322 aa7.47□□□□□ -1.21
NUP98-213ENST00000524563 MYH15Q9Y2K3 1946 aa7.46□□□□□ -1.21
NUP98-213ENST00000524563 SPTBN5Q9NRC6 3674 aaKnown RBP7.46□□□□□ -1.21
NUP98-213ENST00000524563 CCDC196A0A1B0GTZ2 297 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 H3BQ06 376 aaPredicted RBP7.46□□□□□ -1.22
NUP98-213ENST00000524563 H3BRB1 525 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 M0QZ92 97 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 STXBP3O00186 592 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 MEIS2O14770 477 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 LPXNO60711 386 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 DTNBO60941 627 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 IFNAR1P17181 557 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 POU3F3P20264 500 aaPredicted RBP7.46□□□□□ -1.22
NUP98-213ENST00000524563 NEK4P51957 841 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 SCRN1Q12765 414 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 GPM6BQ13491 265 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 NEDD9Q14511 834 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 PKN1Q16512 942 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 USP17L6PQ6QN14 398 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.46□□□□□ -1.224e-8■■■■□ 26.4
NUP98-213ENST00000524563 RSPH3Q86UC2 560 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 SERINC5Q86VE9 423 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 TRIM50Q86XT4 487 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 APBB2Q92870 758 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 WNT8BQ93098 351 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 MRPL38Q96DV4 380 aaKnown RBP7.46□□□□□ -1.22
NUP98-213ENST00000524563 TUT1Q9H6E5 874 aaKnown RBP7.46□□□□□ -1.22
NUP98-213ENST00000524563 SUGCTQ9HAC7 445 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 CLDND1Q9NY35 253 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 LMCD1Q9NZU5 365 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 PKD2L1Q9P0L9 805 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 V9GY48 417 aaPredicted RBP7.46□□□□□ -1.22
NUP98-213ENST00000524563 KMT2EQ8IZD2 1858 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 PIEZO1Q92508 2521 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 ADGRA3Q8IWK6 1321 aa7.46□□□□□ -1.22
NUP98-213ENST00000524563 FSD2A1L4K1 749 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 hCG_1984214I3L0E3 225 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 HAS3O00219 553 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 PIK3CDO00329 1044 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 ADAMTS3O15072 1205 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 TREHO43280 583 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 PRPF3O43395 683 aaKnown RBP7.45□□□□□ -1.22
NUP98-213ENST00000524563 FIBPO43427 364 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 PFKFB2O60825 505 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 CAND2O75155 1236 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 GHRP10912 638 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 SCG2P13521 617 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 IL9P15248 144 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 MARK3P27448 753 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 NAPAP54920 295 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 ST3GAL1Q11201 340 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 CLUL1Q15846 466 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 UBE2SQ16763 222 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 ME3Q16798 604 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 PFKFB3Q16875 520 aaPredicted RBP7.45□□□□□ -1.22
NUP98-213ENST00000524563 TCTN1Q2MV58 587 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 TRIM71Q2Q1W2 868 aaKnown RBP7.45□□□□□ -1.22
NUP98-213ENST00000524563 PUS10Q3MIT2 529 aaKnown RBP7.45□□□□□ -1.22
NUP98-213ENST00000524563 HSDL1Q3SXM5 330 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 LEXMQ3ZCV2 418 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 EPC2Q52LR7 807 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 MYSM1Q5VVJ2 828 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 PPP1R18Q6NYC8 613 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 METTL7BQ6UX53 244 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 CYFIP1Q7L576 1253 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 GJD3Q8N144 294 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 FIBCD1Q8N539 461 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 SAMD3Q8N6K7 520 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 ZNF713Q8N859 430 aaPredicted RBP7.45□□□□□ -1.22
NUP98-213ENST00000524563 BANK1Q8NDB2 785 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 PPP2R3CQ969Q6 453 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 CTAGE1Q96RT6 745 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 C11orf84Q9BUA3 381 aaPredicted RBP7.45□□□□□ -1.22
NUP98-213ENST00000524563 SLC26A6Q9BXS9 759 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 RNF26Q9BY78 433 aaPredicted RBP7.45□□□□□ -1.22
NUP98-213ENST00000524563 NSUN3Q9H649 340 aaKnown RBP7.45□□□□□ -1.22
NUP98-213ENST00000524563 EHMT1Q9H9B1 1298 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 BARHL2Q9NY43 387 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 MAP3K20Q9NYL2 800 aaKnown RBP7.45□□□□□ -1.22
NUP98-213ENST00000524563 CIZ1Q9ULV3 898 aaPredicted RBP7.45□□□□□ -1.22
NUP98-213ENST00000524563 RWDD3Q9Y3V2 267 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 MUC3AQ02505 3323 aa7.45□□□□□ -1.22
NUP98-213ENST00000524563 MYO10Q9HD67 2058 aa7.44□□□□□ -1.22
NUP98-213ENST00000524563 ZDBF2Q9HCK1 2354 aa7.44□□□□□ -1.22
NUP98-213ENST00000524563 ARID2Q68CP9 1835 aa7.44□□□□□ -1.22
NUP98-213ENST00000524563 PPFIA4O75335 1185 aa7.44□□□□□ -1.22
NUP98-213ENST00000524563 STAM2O75886 525 aa7.44□□□□□ -1.22
NUP98-213ENST00000524563 RGS20O76081 388 aa7.44□□□□□ -1.22
NUP98-213ENST00000524563 CTDNEP1O95476 244 aa7.44□□□□□ -1.22
NUP98-213ENST00000524563 TGFB3P10600 412 aa7.44□□□□□ -1.22
NUP98-213ENST00000524563 HOXD8P13378 290 aaPredicted RBP7.44□□□□□ -1.22
NUP98-213ENST00000524563 ALADP13716 330 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms