RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 RBL2Q08999 1139 aa11.43□□□□□ -0.58
TTC39A-213ENST00000524442 SERINC5Q86VE9 423 aa11.43□□□□□ -0.58
TTC39A-213ENST00000524442 NOSTRINQ8IVI9 506 aa11.43□□□□□ -0.58
TTC39A-213ENST00000524442 SLFN12Q8IYM2 578 aa11.43□□□□□ -0.58
TTC39A-213ENST00000524442 RETREG2Q8NC44 543 aa11.43□□□□□ -0.58
TTC39A-213ENST00000524442 ATP6V0A1Q93050 837 aa11.43□□□□□ -0.58
TTC39A-213ENST00000524442 CTAGE1Q96RT6 745 aa11.43□□□□□ -0.58
TTC39A-213ENST00000524442 RNPEPQ9H4A4 650 aa11.43□□□□□ -0.58
TTC39A-213ENST00000524442 ZNF302Q9NR11 478 aa11.43□□□□□ -0.58
TTC39A-213ENST00000524442 DISC1Q9NRI5 854 aa11.43□□□□□ -0.58
TTC39A-213ENST00000524442 SAMM50Q9Y512 469 aa11.43□□□□□ -0.58
TTC39A-213ENST00000524442 POTEB3A0JP26 581 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 K7ELQ4 463 aaPredicted RBP11.42□□□□□ -0.58
TTC39A-213ENST00000524442 MARCH6O60337 910 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 CAND2O75155 1236 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 PFKMP08237 780 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 CYP2C9P11712 490 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 PDCP20941 246 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 CYP2C18P33260 490 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 RFC2P35250 354 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 ADAM17P78536 824 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 PPFIA1Q13136 1202 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 SWSAP1Q6NVH7 229 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 TAF2Q6P1X5 1199 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 PDXDC2PQ6P474 469 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 POTEBQ6S5H4 581 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 B3GNT9Q6UX72 402 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 RPUSD2Q8IZ73 545 aaKnown RBP11.42□□□□□ -0.58
TTC39A-213ENST00000524442 TDHQ8IZJ6 230 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 PPP1R13LQ8WUF5 828 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 PPP1R12CQ9BZL4 782 aa11.42□□□□□ -0.58
TTC39A-213ENST00000524442 NOL7Q9UMY1 257 aaKnown RBP11.42□□□□□ -0.58
TTC39A-213ENST00000524442 MAFBQ9Y5Q3 323 aaPredicted RBP11.42□□□□□ -0.58
TTC39A-213ENST00000524442 MBLAC1A4D2B0 266 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-213ENST00000524442 FAM205CA6NFA0 338 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 H3BQV1 296 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 HBP1O60381 514 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 NEMFO60524 1076 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 SELPP16109 830 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 MARK3P27448 753 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 PPP2R5CQ13362 524 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 PLCB4Q15147 1175 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 GRIK4Q16099 956 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 HABP4Q5JVS0 413 aaKnown RBP11.41□□□□□ -0.58
TTC39A-213ENST00000524442 LARP1BQ659C4 914 aaKnown RBP11.41□□□□□ -0.58
TTC39A-213ENST00000524442 MIER3Q7Z3K6 550 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 RPAINQ86UA6 219 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 CCDC60Q8IWA6 550 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-213ENST00000524442 ATP8B4Q8TF62 1192 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 LMBR1Q8WVP7 490 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 BBXQ8WY36 941 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-213ENST00000524442 HAS1Q92839 578 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 FAM167AQ96KS9 214 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 UIMC1Q96RL1 719 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 WNT8AQ9H1J5 351 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 UNC45AQ9H3U1 944 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 IL23AQ9NPF7 189 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 SETD4Q9NVD3 440 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 GABBR1Q9UBS5 961 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 TRPC6Q9Y210 931 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 COL1A2P08123 1366 aa11.41□□□□□ -0.58
TTC39A-213ENST00000524442 DOCK5Q9H7D0 1870 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 IGSF9BQ9UPX0 1349 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 LTBP2Q14767 1821 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 TREHO43280 583 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 CHMP2AO43633 222 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 DKC1O60832 514 aaKnown RBP eCLIP11.4□□□□□ -0.58
TTC39A-213ENST00000524442 IQCF3P0C7M6 154 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 CKBP12277 381 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 INSRRP14616 1297 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 CSF2RAP15509 400 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 ZNF200P98182 395 aaPredicted RBP11.4□□□□□ -0.58
TTC39A-213ENST00000524442 HIC1Q14526 733 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 CALCRLQ16602 461 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 TRIM71Q2Q1W2 868 aaKnown RBP11.4□□□□□ -0.58
TTC39A-213ENST00000524442 ZNF484Q5JVG2 852 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 PSRC1Q6PGN9 363 aaPredicted RBP11.4□□□□□ -0.58
TTC39A-213ENST00000524442 POTEDQ86YR6 584 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 HSCBQ8IWL3 235 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 DHX38Q92620 1227 aaKnown RBP11.4□□□□□ -0.58
TTC39A-213ENST00000524442 NRBP2Q9NSY0 501 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 TUBE1Q9UJT0 475 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 VAV3Q9UKW4 847 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 PCDHA12Q9UN75 941 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 CEP131Q9UPN4 1083 aa11.4□□□□□ -0.58
TTC39A-213ENST00000524442 UMODL1Q5DID0 1318 aa11.39□□□□□ -0.59
TTC39A-213ENST00000524442 KIF28PB7ZC32 967 aa11.39□□□□□ -0.59
TTC39A-213ENST00000524442 PDIA4P13667 645 aaKnown RBP11.39□□□□□ -0.59
TTC39A-213ENST00000524442 CCL23P55773 120 aa11.39□□□□□ -0.59
TTC39A-213ENST00000524442 LRIT3Q3SXY7 679 aa11.39□□□□□ -0.59
TTC39A-213ENST00000524442 RILPL1Q5EBL4 403 aa11.39□□□□□ -0.59
TTC39A-213ENST00000524442 TTC38Q5R3I4 469 aa11.39□□□□□ -0.59
TTC39A-213ENST00000524442 MARCH8Q5T0T0 291 aa11.39□□□□□ -0.59
TTC39A-213ENST00000524442 MCTP1Q6DN14 999 aa11.39□□□□□ -0.59
TTC39A-213ENST00000524442 LRRC8DQ7L1W4 858 aa11.39□□□□□ -0.59
TTC39A-213ENST00000524442 RSPH3Q86UC2 560 aa11.39□□□□□ -0.59
TTC39A-213ENST00000524442 CKAP2LQ8IYA6 745 aa11.39□□□□□ -0.59
TTC39A-213ENST00000524442 GJA10Q969M2 543 aa11.39□□□□□ -0.59
TTC39A-213ENST00000524442 MTMR9Q96QG7 549 aa11.39□□□□□ -0.59
TTC39A-213ENST00000524442 MTIF3Q9H2K0 278 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms