RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 PCDH12Q9NPG4 1184 aa5.4□□□□□ -1.54
PCM1-220ENST00000523896 NUB1Q9Y5A7 615 aa5.4□□□□□ -1.54
PCM1-220ENST00000523896 KRTAP9-7A8MTY7 169 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 POU3F3P20264 500 aaPredicted RBP5.39□□□□□ -1.55
PCM1-220ENST00000523896 IBSPP21815 317 aaPredicted RBP5.39□□□□□ -1.55
PCM1-220ENST00000523896 BUD31P41223 144 aaPredicted RBP5.39□□□□□ -1.55
PCM1-220ENST00000523896 JAM2P57087 298 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 GJA9P57773 515 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 AMPD3Q01432 767 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 DSG1Q02413 1049 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 ARHGAP44Q17R89 818 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 CT47A1Q5JQC4 288 aaPredicted RBP5.39□□□□□ -1.55
PCM1-220ENST00000523896 LIPIQ6XZB0 460 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 ETV3LQ6ZN32 361 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 DDX46Q7L014 1031 aaKnown RBP5.39□□□□□ -1.55
PCM1-220ENST00000523896 SAPCD2Q86UD0 394 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 UBR7Q8N806 425 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 C2orf69Q8N8R5 385 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 OR2W6PQ8NHA6 318 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 SH3RF2Q8TEC5 729 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 ZBTB8AQ96BR9 441 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 SPATA25Q9BR10 227 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 PDGFDQ9GZP0 370 aaPredicted RBP5.39□□□□□ -1.55
PCM1-220ENST00000523896 NTMQ9P121 344 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 MYOTQ9UBF9 498 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 B4GALT6Q9UBX8 382 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 DSEQ9UL01 958 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 SRPK3Q9UPE1 567 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 NOP58Q9Y2X3 529 aaKnown RBP5.39□□□□□ -1.55
PCM1-220ENST00000523896 SIT1Q9Y3P8 196 aa5.39□□□□□ -1.55
PCM1-220ENST00000523896 MAN2B1O00754 1011 aa5.38□□□□□ -1.55
PCM1-220ENST00000523896 F2P00734 622 aa5.38□□□□□ -1.55
PCM1-220ENST00000523896 PLA2G1BP04054 148 aaKnown RBP5.38□□□□□ -1.55
PCM1-220ENST00000523896 EPHA5P54756 1037 aa5.38□□□□□ -1.55
PCM1-220ENST00000523896 UBXN11Q5T124 520 aa5.38□□□□□ -1.55
PCM1-220ENST00000523896 NT5DC1Q5TFE4 455 aa5.38□□□□□ -1.55
PCM1-220ENST00000523896 OSTM1Q86WC4 334 aa5.38□□□□□ -1.55
PCM1-220ENST00000523896 NLGN4XQ8N0W4 816 aa5.38□□□□□ -1.55
PCM1-220ENST00000523896 TP53I13Q8NBR0 393 aaPredicted RBP5.38□□□□□ -1.55
PCM1-220ENST00000523896 ADAM7Q9H2U9 754 aa5.38□□□□□ -1.55
PCM1-220ENST00000523896 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.38□□□□□ -1.55
PCM1-220ENST00000523896 NGRNQ9NPE2 291 aaKnown RBP5.38□□□□□ -1.55
PCM1-220ENST00000523896 ASH2LQ9UBL3 628 aa5.38□□□□□ -1.55
PCM1-220ENST00000523896 PALD1Q9ULE6 856 aa5.38□□□□□ -1.55
PCM1-220ENST00000523896 PLA2G2DQ9UNK4 145 aa5.38□□□□□ -1.55
PCM1-220ENST00000523896 PCDHB4Q9Y5E5 795 aa5.38□□□□□ -1.55
PCM1-220ENST00000523896 hCG_2014768A0A024R1R8 64 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 TCRBV5S2A0A599 114 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 SLC12A8A0AV02 714 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 PTPDC1A2A3K4 754 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 SH3D21A4FU49 640 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 ZNF891A8MT65 544 aaPredicted RBP5.37□□□□□ -1.55
PCM1-220ENST00000523896 SLC27A2O14975 620 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 GAS7O60861 476 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 CLASP2O75122 1294 aaKnown RBP5.37□□□□□ -1.55
PCM1-220ENST00000523896 CPEP16870 476 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 KRT15P19012 456 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 SARSP49591 514 aaKnown RBP5.37□□□□□ -1.55
PCM1-220ENST00000523896 SCNN1BP51168 640 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 HTRA3P83110 453 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 NFKB2Q00653 900 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 PLP2Q04941 152 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 SKOR2Q2VWA4 1001 aaPredicted RBP5.37□□□□□ -1.55
PCM1-220ENST00000523896 VWA3BQ502W6 1294 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 KCTD1Q719H9 257 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 STRA8Q7Z7C7 330 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 PTRH1Q86Y79 214 aaKnown RBP5.37□□□□□ -1.55
PCM1-220ENST00000523896 NOSTRINQ8IVI9 506 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 TRIM48Q8IWZ4 208 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 TTLL11Q8NHH1 800 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 BORCS6Q96GS4 357 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 BOCQ9BWV1 1114 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 FAM126AQ9BYI3 521 aaPredicted RBP5.37□□□□□ -1.55
PCM1-220ENST00000523896 CD244Q9BZW8 370 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 ZKSCAN5Q9Y2L8 839 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 ATP8A1Q9Y2Q0 1164 aa5.37□□□□□ -1.55
PCM1-220ENST00000523896 A0A1B0GTL3 188 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 EYA4O95677 639 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 BPIP17213 487 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 GJA4P35212 333 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 TUSC3Q13454 348 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 CREB3L3Q68CJ9 461 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 CD300LDQ6UXZ3 194 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 MILR1Q7Z6M3 343 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.36□□□□□ -1.55
PCM1-220ENST00000523896 MIB1Q86YT6 1006 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 ADGRG2Q8IZP9 1017 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 CARFQ8N187 725 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 NXPE1Q8N323 547 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 SMC1BQ8NDV3 1235 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 ZNF526Q8TF50 670 aaPredicted RBP5.36□□□□□ -1.55
PCM1-220ENST00000523896 PUS7Q96PZ0 661 aaKnown RBP5.36□□□□□ -1.55
PCM1-220ENST00000523896 BDH2Q9BUT1 245 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 MCM8Q9UJA3 840 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 TELO2Q9Y4R8 837 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 ATP23Q9Y6H3 246 aa5.36□□□□□ -1.55
PCM1-220ENST00000523896 ZEB2O60315 1214 aa5.35□□□□□ -1.55
PCM1-220ENST00000523896 BRINP1O60477 761 aa5.35□□□□□ -1.55
PCM1-220ENST00000523896 ZBTB48P10074 688 aaPredicted RBP5.35□□□□□ -1.55
PCM1-220ENST00000523896 ATP2A2P16615 1042 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms