RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 NBPF5PQ86XG9 351 aaPredicted RBP7.69□□□□□ -1.18
LINC00534-203ENST00000523406 TICAM2Q86XR7 235 aa7.69□□□□□ -1.18
LINC00534-203ENST00000523406 C7orf61Q8IZ16 206 aa7.69□□□□□ -1.18
LINC00534-203ENST00000523406 KBTBD3Q8NAB2 608 aa7.69□□□□□ -1.18
LINC00534-203ENST00000523406 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.69□□□□□ -1.181e-6■■■□□ 18.4
LINC00534-203ENST00000523406 EDC3Q96F86 508 aaKnown RBP7.69□□□□□ -1.18
LINC00534-203ENST00000523406 CDC5LQ99459 802 aaKnown RBP7.69□□□□□ -1.18
LINC00534-203ENST00000523406 KLHL25Q9H0H3 589 aa7.69□□□□□ -1.18
LINC00534-203ENST00000523406 IL25Q9H293 177 aa7.69□□□□□ -1.18
LINC00534-203ENST00000523406 PALD1Q9ULE6 856 aa7.69□□□□□ -1.18
LINC00534-203ENST00000523406 CAPN6Q9Y6Q1 641 aa7.69□□□□□ -1.18
LINC00534-203ENST00000523406 CCDC171Q6TFL3 1326 aa7.69□□□□□ -1.18
LINC00534-203ENST00000523406 RFX7Q2KHR2 1363 aa7.69□□□□□ -1.18
LINC00534-203ENST00000523406 ZNF609O15014 1411 aa7.69□□□□□ -1.18
LINC00534-203ENST00000523406 A0A0D9SFI3 127 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 ANKRD34BA5PLL1 514 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 RNF113AO15541 343 aaKnown RBP7.68□□□□□ -1.18
LINC00534-203ENST00000523406 PDE8BO95263 885 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 CBX7O95931 251 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 EPHX1P07099 455 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 UQCRFS1P1P0C7P4 283 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 PSMA5P28066 241 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 ADORA1P30542 326 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 OXCT1P55809 520 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 PTH1RQ03431 593 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 PUM3Q15397 648 aaKnown RBP7.68□□□□□ -1.18
LINC00534-203ENST00000523406 MCMDC2Q4G0Z9 681 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 ZNF772Q68DY9 489 aaPredicted RBP7.68□□□□□ -1.18
LINC00534-203ENST00000523406 HEATR6Q6AI08 1181 aaKnown RBP7.68□□□□□ -1.18
LINC00534-203ENST00000523406 ZDHHC13Q8IUH4 622 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 ZNF513Q8N8E2 541 aaPredicted RBP7.68□□□□□ -1.18
LINC00534-203ENST00000523406 DTWD2Q8NBA8 298 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 LPIN2Q92539 896 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 ZNF669Q96BR6 464 aaPredicted RBP7.68□□□□□ -1.18
LINC00534-203ENST00000523406 OSBPL1AQ9BXW6 950 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 UPF3BQ9BZI7 483 aaKnown RBP7.68□□□□□ -1.18
LINC00534-203ENST00000523406 MKNK2Q9HBH9 465 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 CWC22Q9HCG8 908 aaKnown RBP7.68□□□□□ -1.18
LINC00534-203ENST00000523406 SRP68Q9UHB9 627 aaKnown RBP7.68□□□□□ -1.18
LINC00534-203ENST00000523406 ZNF451Q9Y4E5 1061 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 RBM8AQ9Y5S9 174 aaKnown RBP7.68□□□□□ -1.18
LINC00534-203ENST00000523406 SNX14Q9Y5W7 946 aa7.68□□□□□ -1.18
LINC00534-203ENST00000523406 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.68□□□□□ -1.18
LINC00534-203ENST00000523406 PRR19A6NJB7 356 aa7.67□□□□□ -1.18
LINC00534-203ENST00000523406 FRAT2O75474 233 aaPredicted RBP7.67□□□□□ -1.18
LINC00534-203ENST00000523406 ZFYP08048 801 aaPredicted RBP7.67□□□□□ -1.18
LINC00534-203ENST00000523406 CASTP20810 708 aaKnown RBP7.67□□□□□ -1.18
LINC00534-203ENST00000523406 CD247P20963 164 aa7.67□□□□□ -1.18
LINC00534-203ENST00000523406 SNW1Q13573 536 aaKnown RBP7.67□□□□□ -1.18
LINC00534-203ENST00000523406 SLC10A6Q3KNW5 377 aa7.67□□□□□ -1.18
LINC00534-203ENST00000523406 TBC1D9BQ66K14 1250 aa7.67□□□□□ -1.18
LINC00534-203ENST00000523406 ZSCAN25Q6NSZ9 544 aa7.67□□□□□ -1.18
LINC00534-203ENST00000523406 NOL8Q76FK4 1167 aaKnown RBP7.67□□□□□ -1.18
LINC00534-203ENST00000523406 ANKRD18AQ8IVF6 992 aa7.67□□□□□ -1.18
LINC00534-203ENST00000523406 MAP4K1Q92918 833 aa7.67□□□□□ -1.18
LINC00534-203ENST00000523406 IL17RAQ96F46 866 aa7.67□□□□□ -1.18
LINC00534-203ENST00000523406 JAKMIP1Q96N16 626 aaKnown RBP7.67□□□□□ -1.18
LINC00534-203ENST00000523406 DNAJC7Q99615 494 aa7.67□□□□□ -1.18
LINC00534-203ENST00000523406 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.67□□□□□ -1.18
LINC00534-203ENST00000523406 EPN3Q9H201 632 aa7.67□□□□□ -1.18
LINC00534-203ENST00000523406 GP6Q9HCN6 339 aa7.67□□□□□ -1.18
LINC00534-203ENST00000523406 HELLSQ9NRZ9 838 aa7.67□□□□□ -1.18
LINC00534-203ENST00000523406 PRR13Q9NZ81 148 aa7.67□□□□□ -1.18
LINC00534-203ENST00000523406 CYP46A1Q9Y6A2 500 aa7.67□□□□□ -1.18
LINC00534-203ENST00000523406 THSD7AQ9UPZ6 1657 aa7.67□□□□□ -1.18
LINC00534-203ENST00000523406 NUP98P52948 1817 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 AK9Q5TCS8 1911 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 TAF5LO75529 589 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 RBM6P78332 1123 aaKnown RBP7.66□□□□□ -1.18
LINC00534-203ENST00000523406 TNK2Q07912 1038 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 IFRD2Q12894 506 aaPredicted RBP7.66□□□□□ -1.18
LINC00534-203ENST00000523406 KRT32Q14532 448 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 TTF1Q15361 905 aaPredicted RBP7.66□□□□□ -1.18
LINC00534-203ENST00000523406 SLC10A5Q5PT55 438 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 CREB3L3Q68CJ9 461 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 SMIM5Q71RC9 77 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 SPATC1Q76KD6 591 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 MFSD4AQ8N468 514 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 PIWIL2Q8TC59 973 aaKnown RBP7.66□□□□□ -1.18
LINC00534-203ENST00000523406 TMX3Q96JJ7 454 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 APBA2Q99767 749 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 TM6SF1Q9BZW5 370 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 PRDM14Q9GZV8 571 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 PDRG1Q9NUG6 133 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 HMG20BQ9P0W2 317 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 KCNH3Q9ULD8 1083 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 PCDHB12Q9Y5F1 795 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 RTL9Q8NET4 1388 aa7.66□□□□□ -1.18
LINC00534-203ENST00000523406 TLDC2A0PJX2 215 aa7.65□□□□□ -1.18
LINC00534-203ENST00000523406 SLC27A2O14975 620 aa7.65□□□□□ -1.18
LINC00534-203ENST00000523406 NAT2P11245 290 aa7.65□□□□□ -1.18
LINC00534-203ENST00000523406 NUCB2P80303 420 aa7.65□□□□□ -1.18
LINC00534-203ENST00000523406 TCEAL1Q15170 157 aa7.65□□□□□ -1.18
LINC00534-203ENST00000523406 NECTIN1Q15223 517 aa7.65□□□□□ -1.18
LINC00534-203ENST00000523406 SF3B3Q15393 1217 aaKnown RBP7.65□□□□□ -1.18
LINC00534-203ENST00000523406 NKPD1Q17RQ9 610 aa7.65□□□□□ -1.18
LINC00534-203ENST00000523406 MTERF2Q49AM1 385 aa7.65□□□□□ -1.18
LINC00534-203ENST00000523406 RIC1Q4ADV7 1423 aa7.65□□□□□ -1.18
LINC00534-203ENST00000523406 ZMYM1Q5SVZ6 1142 aa7.65□□□□□ -1.18
LINC00534-203ENST00000523406 CCDC129Q6ZRS4 1044 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms