RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 DHCR24Q15392 516 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 FIGNQ5HY92 759 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 CPZQ66K79 652 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 KCTD1Q719H9 257 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 OTOP1Q7RTM1 612 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.88□□□□□ -1.31
SKP1-211ENST00000523359 NOSTRINQ8IVI9 506 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 NLGN4XQ8N0W4 816 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 ARRDC4Q8NCT1 418 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 CLEC4DQ8WXI8 215 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 ALG3Q92685 438 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 TSPAN17Q96FV3 270 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 BOCQ9BWV1 1114 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 KRTAP4-11Q9BYQ6 195 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 BRINP2Q9C0B6 783 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 THG1LQ9NWX6 298 aaKnown RBP6.88□□□□□ -1.31
SKP1-211ENST00000523359 NOP58Q9Y2X3 529 aaKnown RBP6.88□□□□□ -1.31
SKP1-211ENST00000523359 NUB1Q9Y5A7 615 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 ATP23Q9Y6H3 246 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 SCDO00767 359 aa6.87□□□□□ -1.31
SKP1-211ENST00000523359 BUB1BO60566 1050 aaPredicted RBP6.87□□□□□ -1.31
SKP1-211ENST00000523359 ZBTB48P10074 688 aaPredicted RBP6.87□□□□□ -1.31
SKP1-211ENST00000523359 ATP2A2P16615 1042 aaKnown RBP6.87□□□□□ -1.31
SKP1-211ENST00000523359 IGBP1P78318 339 aa6.87□□□□□ -1.31
SKP1-211ENST00000523359 IRF9Q00978 393 aa6.87□□□□□ -1.31
SKP1-211ENST00000523359 GRIN1Q05586 938 aa6.87□□□□□ -1.31
SKP1-211ENST00000523359 SLC9A5Q14940 896 aa6.87□□□□□ -1.31
SKP1-211ENST00000523359 DDX42Q86XP3 938 aaKnown RBP eCLIP6.87□□□□□ -1.31
SKP1-211ENST00000523359 CHTF18Q8WVB6 975 aa6.87□□□□□ -1.31
SKP1-211ENST00000523359 USP7Q93009 1102 aa6.87□□□□□ -1.31
SKP1-211ENST00000523359 GPR101Q96P66 508 aaPredicted RBP6.87□□□□□ -1.31
SKP1-211ENST00000523359 PCDHA5Q9Y5H7 936 aa6.87□□□□□ -1.31
SKP1-211ENST00000523359 OTOL1A6NHN0 477 aaPredicted RBP6.86□□□□□ -1.31
SKP1-211ENST00000523359 FOXD2O60548 495 aaPredicted RBP6.86□□□□□ -1.31
SKP1-211ENST00000523359 CLASP2O75122 1294 aaKnown RBP6.86□□□□□ -1.31
SKP1-211ENST00000523359 SASH1O94885 1247 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 EYA4O95677 639 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 ADCYAP1R1P41586 468 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 ID4P47928 161 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 EPHA5P54756 1037 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 IL2P60568 153 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 ZNF200P98182 395 aaPredicted RBP6.86□□□□□ -1.31
SKP1-211ENST00000523359 NFIXQ14938 502 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 BTBD8Q5XKL5 378 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 CREB3L3Q68CJ9 461 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 TRIM48Q8IWZ4 208 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 SMC1BQ8NDV3 1235 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 ATL2Q8NHH9 583 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 FEZF2Q8TBJ5 459 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 PWWP2AQ96N64 755 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 XYLT2Q9H1B5 865 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 RIC8BQ9NVN3 520 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 H2AFY2Q9P0M6 372 aaPredicted RBP6.86□□□□□ -1.31
SKP1-211ENST00000523359 ATP8A1Q9Y2Q0 1164 aa6.86□□□□□ -1.31
SKP1-211ENST00000523359 FAM90A27PA6NNH2 459 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 H7C1D1 291 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 NEMP1O14524 444 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 HIP1RO75146 1068 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 FKBP9O95302 570 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 CPEP16870 476 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 BPIP17213 487 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 LIMS1P48059 325 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 CDKN1CP49918 316 aaPredicted RBP6.85□□□□□ -1.31
SKP1-211ENST00000523359 EVA1CP58658 441 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 ANAPC15P60006 121 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 SEC23AQ15436 765 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 FKBP9P1Q75LS8 142 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 SYT8Q8NBV8 401 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 TTC1Q99614 292 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 IFT22Q9H7X7 185 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 OXSMQ9NWU1 459 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 MCM8Q9UJA3 840 aa6.85□□□□□ -1.31
SKP1-211ENST00000523359 DVL2O14641 736 aa6.84□□□□□ -1.31
SKP1-211ENST00000523359 PTPN1P18031 435 aaKnown RBP6.84□□□□□ -1.31
SKP1-211ENST00000523359 SLC9A1P19634 815 aa6.84□□□□□ -1.31
SKP1-211ENST00000523359 PMLP29590 882 aa6.84□□□□□ -1.31
SKP1-211ENST00000523359 LCE5AQ5TCM9 118 aa6.84□□□□□ -1.31
SKP1-211ENST00000523359 LHFPL2Q6ZUX7 228 aa6.84□□□□□ -1.31
SKP1-211ENST00000523359 FAM126BQ8IXS8 530 aa6.84□□□□□ -1.31
SKP1-211ENST00000523359 ZDHHC14Q8IZN3 488 aa6.84□□□□□ -1.31
SKP1-211ENST00000523359 YIPF4Q9BSR8 244 aa6.84□□□□□ -1.31
SKP1-211ENST00000523359 SPTLC3Q9NUV7 552 aa6.84□□□□□ -1.31
SKP1-211ENST00000523359 RTEL1Q9NZ71 1219 aa6.84□□□□□ -1.31
SKP1-211ENST00000523359 DTLQ9NZJ0 730 aa6.84□□□□□ -1.31
SKP1-211ENST00000523359 B3GALT1Q9Y5Z6 326 aa6.84□□□□□ -1.31
SKP1-211ENST00000523359 ACOT7O00154 380 aa6.83□□□□□ -1.32
SKP1-211ENST00000523359 LSSP48449 732 aa6.83□□□□□ -1.32
SKP1-211ENST00000523359 KPNA1P52294 538 aaPredicted RBP6.83□□□□□ -1.32
SKP1-211ENST00000523359 KIF11P52732 1056 aa6.83□□□□□ -1.32
SKP1-211ENST00000523359 STAT4Q14765 748 aa6.83□□□□□ -1.32
SKP1-211ENST00000523359 ZNF174Q15697 407 aa6.83□□□□□ -1.32
SKP1-211ENST00000523359 PAN2Q504Q3 1202 aaKnown RBP6.83□□□□□ -1.32
SKP1-211ENST00000523359 MIB1Q86YT6 1006 aa6.83□□□□□ -1.32
SKP1-211ENST00000523359 ANKRD13AQ8IZ07 590 aa6.83□□□□□ -1.32
SKP1-211ENST00000523359 KIAA1958Q8N8K9 716 aa6.83□□□□□ -1.32
SKP1-211ENST00000523359 PRPF38AQ8NAV1 312 aaKnown RBP6.83□□□□□ -1.32
SKP1-211ENST00000523359 TTLL11Q8NHH1 800 aa6.83□□□□□ -1.32
SKP1-211ENST00000523359 DLG3Q92796 817 aa6.83□□□□□ -1.32
SKP1-211ENST00000523359 KRTAP9-3Q9BYQ3 159 aa6.83□□□□□ -1.32
SKP1-211ENST00000523359 KCNH7Q9NS40 1196 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms