RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 CTTNQ14247 550 aaKnown RBP18.25■□□□□ 0.51
LSM1-204ENST00000522515 UGCGQ16739 394 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 DGKDQ16760 1214 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 GNASQ5JWF2 1037 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 TRIM50Q86XT4 487 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 KLHDC9Q8NEP7 349 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 LMBRD1Q9NUN5 540 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 WRAP73Q9P2S5 460 aaPredicted RBP18.25■□□□□ 0.51
LSM1-204ENST00000522515 GABBR1Q9UBS5 961 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 LGR5O75473 907 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 MYCNP04198 464 aaPredicted RBP18.25■□□□□ 0.51
LSM1-204ENST00000522515 LGALS2P05162 132 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 KARSQ15046 597 aaKnown RBP18.25■□□□□ 0.51
LSM1-204ENST00000522515 ZRSR1Q15695 479 aaKnown RBP18.25■□□□□ 0.51
LSM1-204ENST00000522515 ECM1Q16610 540 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 BRDTQ58F21 947 aaPredicted RBP18.25■□□□□ 0.51
LSM1-204ENST00000522515 HAUS3Q68CZ6 603 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 TPH2Q8IWU9 490 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 LXNQ9BS40 222 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 POLR3CQ9BUI4 534 aaPredicted RBP18.25■□□□□ 0.51
LSM1-204ENST00000522515 CCSER1Q9C0I3 900 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 ZNF302Q9NR11 478 aa18.25■□□□□ 0.51
LSM1-204ENST00000522515 A0A1B0GVL5 298 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 POTEB3A0JP26 581 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 GOLGA6L22H0YM25 854 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 ZNF286BP0CG31 522 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 MCM4P33991 863 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 QARSP47897 775 aaKnown RBP18.24■□□□□ 0.51
LSM1-204ENST00000522515 STAT5BP51692 787 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 LRRC41Q15345 812 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 CCSAPQ6IQ19 270 aaPredicted RBP18.24■□□□□ 0.51
LSM1-204ENST00000522515 POTEBQ6S5H4 581 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 NEK9Q8TD19 979 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 PNMA5Q96PV4 448 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 PLIN2Q99541 437 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 C16orf70Q9BSU1 422 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 PANK2Q9BZ23 570 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 GOLPH3LQ9H4A5 285 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 AZI2Q9H6S1 392 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 TUFT1Q9NNX1 390 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 MAFBQ9Y5Q3 323 aaPredicted RBP18.24■□□□□ 0.51
LSM1-204ENST00000522515 STK24Q9Y6E0 443 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 EMSYQ7Z589 1322 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 IGSF9BQ9UPX0 1349 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 WDR81Q562E7 1941 aa18.24■□□□□ 0.51
LSM1-204ENST00000522515 A0A087X0B3 334 aa18.23■□□□□ 0.51
LSM1-204ENST00000522515 ZNF862O60290 1169 aa18.23■□□□□ 0.51
LSM1-204ENST00000522515 MYL3P08590 195 aa18.23■□□□□ 0.51
LSM1-204ENST00000522515 CST5P28325 142 aaPredicted RBP18.23■□□□□ 0.51
LSM1-204ENST00000522515 TXLNAP40222 546 aa18.23■□□□□ 0.51
LSM1-204ENST00000522515 PSMC5P62195 406 aa18.23■□□□□ 0.51
LSM1-204ENST00000522515 GRB10Q13322 594 aa18.23■□□□□ 0.51
LSM1-204ENST00000522515 FAM160B1Q5W0V3 765 aa18.23■□□□□ 0.51
LSM1-204ENST00000522515 POTEGQ6S5H5 508 aa18.23■□□□□ 0.51
LSM1-204ENST00000522515 RNF180Q86T96 592 aa18.23■□□□□ 0.51
LSM1-204ENST00000522515 FSIP1Q8NA03 581 aa18.23■□□□□ 0.51
LSM1-204ENST00000522515 AFAP1L1Q8TED9 768 aa18.23■□□□□ 0.51
LSM1-204ENST00000522515 MRPS27Q92552 414 aaKnown RBP18.23■□□□□ 0.51
LSM1-204ENST00000522515 GLG1Q92896 1179 aa18.23■□□□□ 0.51
LSM1-204ENST00000522515 FAM13BQ9NYF5 915 aa18.23■□□□□ 0.51
LSM1-204ENST00000522515 A0A087WWV3 80 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 GJB1P08034 283 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 PFKFB1P16118 471 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 ATP4AP20648 1035 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 UBE2HP62256 183 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 PURAQ00577 322 aaKnown RBP18.22■□□□□ 0.51
LSM1-204ENST00000522515 KCNA10Q16322 511 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 HYIQ5T013 277 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 PDXDC2PQ6P474 469 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 PLPPR4Q7Z2D5 763 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 TRMT1LQ7Z2T5 733 aaKnown RBP18.22■□□□□ 0.51
LSM1-204ENST00000522515 PDILTQ8N807 584 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 RASSF8Q8NHQ8 419 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 U2AF1L4Q8WU68 220 aaKnown RBP18.22■□□□□ 0.51
LSM1-204ENST00000522515 ATP6V0A1Q93050 837 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 CALML4Q96GE6 196 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 SMARCAD1Q9H4L7 1026 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 ZSWIM4Q9H7M6 989 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 OGDHLQ9ULD0 1010 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 KIAA1024Q9UPX6 916 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 HPSEQ9Y251 543 aa18.22■□□□□ 0.51
LSM1-204ENST00000522515 FAM237AA0A1B0GTK4 181 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 ZBTB39O15060 712 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 SGPL1O95470 568 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 ASGR1P07306 291 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 NDUFA8P51970 172 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 TMEM119Q4V9L6 283 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 C4orf19Q8IY42 314 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 ARRDC4Q8NCT1 418 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 LRRC15Q8TF66 581 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 KAT2BQ92831 832 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 CDK5RAP3Q96JB5 506 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 DDX19AQ9NUU7 478 aaKnown RBP18.21■□□□□ 0.51
LSM1-204ENST00000522515 CCDC39Q9UFE4 941 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 KCNH3Q9ULD8 1083 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 KDM3AQ9Y4C1 1321 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 H3BRB1 525 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 SLC26A4O43511 780 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 PLCG1P19174 1290 aa18.21■□□□□ 0.51
LSM1-204ENST00000522515 MUTP22033 750 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms