RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 CST5P28325 142 aaPredicted RBP9.42□□□□□ -0.9
PVT1-213ENST00000522414 ADH6P28332 368 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 CYP2C18P33260 490 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 PSMC6P62333 389 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 SMAD3P84022 425 aaKnown RBP9.42□□□□□ -0.9
PVT1-213ENST00000522414 TNP2Q05952 138 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 AAMPQ13685 434 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 FSCN1Q16658 493 aaKnown RBP9.42□□□□□ -0.9
PVT1-213ENST00000522414 NKAPLQ5M9Q1 402 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 AKNAD1Q5T1N1 836 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 SYDE2Q5VT97 1194 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 IQSEC1Q6DN90 963 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 FIGNL1Q6PIW4 674 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 CWC27Q6UX04 472 aaKnown RBP9.42□□□□□ -0.9
PVT1-213ENST00000522414 BTNL9Q6UXG8 535 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 KIAA1211Q6ZU35 1233 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 TBC1D10CQ8IV04 446 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 FBXO16Q8IX29 292 aaPredicted RBP9.42□□□□□ -0.9
PVT1-213ENST00000522414 CLEC4DQ8WXI8 215 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.42□□□□□ -0.9
PVT1-213ENST00000522414 PPP1R12CQ9BZL4 782 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 AP5M1Q9H0R1 490 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 TRPV6Q9H1D0 765 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 RANBP17Q9H2T7 1088 aaKnown RBP9.42□□□□□ -0.9
PVT1-213ENST00000522414 TCP11L1Q9NUJ3 509 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 LAMA4Q16363 1823 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 LRRC37A2A6NM11 1700 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 CHD9Q3L8U1 2897 aa9.42□□□□□ -0.9
PVT1-213ENST00000522414 ZMYM6O95789 1325 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 CCDC171Q6TFL3 1326 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 ZNF213O14771 459 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 ATXN7O15265 892 aaPredicted RBP9.41□□□□□ -0.9
PVT1-213ENST00000522414 CD4P01730 458 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 PDHBP11177 359 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 CALML3P27482 149 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 NKX3-2P78367 333 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 NUCB1Q02818 461 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 MFSD5Q6N075 450 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 NLRP8Q86W28 1048 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 FAM126BQ8IXS8 530 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 PPP1R13LQ8WUF5 828 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 MYLIPQ8WY64 445 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 TBC1D5Q92609 795 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 TTC14Q96N46 770 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 UBA5Q9GZZ9 404 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 LCTP09848 1927 aa9.41□□□□□ -0.9
PVT1-213ENST00000522414 MYO9BQ13459 2157 aa9.4□□□□□ -0.9
PVT1-213ENST00000522414 MUC3AQ02505 3323 aa9.4□□□□□ -0.9
PVT1-213ENST00000522414 A0A0U1RQG5 324 aaPredicted RBP9.4□□□□□ -0.9
PVT1-213ENST00000522414 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.4□□□□□ -0.9
PVT1-213ENST00000522414 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.4□□□□□ -0.9
PVT1-213ENST00000522414 PTPDC1A2A3K4 754 aa9.4□□□□□ -0.9
PVT1-213ENST00000522414 PCBP4P57723 403 aaKnown RBP9.4□□□□□ -0.9
PVT1-213ENST00000522414 ZNF543Q08ER8 600 aa9.4□□□□□ -0.9
PVT1-213ENST00000522414 ITGA7Q13683 1181 aa9.4□□□□□ -0.9
PVT1-213ENST00000522414 TMEM240Q5SV17 173 aa9.4□□□□□ -0.9
PVT1-213ENST00000522414 SLC30A10Q6XR72 485 aa9.4□□□□□ -0.9
PVT1-213ENST00000522414 ZNF365Q70YC5 407 aa9.4□□□□□ -0.9
PVT1-213ENST00000522414 TLK2Q86UE8 772 aa9.4□□□□□ -0.9
PVT1-213ENST00000522414 SLC43A3Q8NBI5 491 aa9.4□□□□□ -0.9
PVT1-213ENST00000522414 WDR11Q9BZH6 1224 aa9.4□□□□□ -0.9
PVT1-213ENST00000522414 ZSWIM5Q9P217 1185 aa9.4□□□□□ -0.9
PVT1-213ENST00000522414 TTC28Q96AY4 2481 aa9.4□□□□□ -0.91
PVT1-213ENST00000522414 NEDD4P46934 1319 aa9.39□□□□□ -0.91
PVT1-213ENST00000522414 UMODL1Q5DID0 1318 aa9.39□□□□□ -0.91
PVT1-213ENST00000522414 MROH7Q68CQ1 1323 aa9.39□□□□□ -0.91
PVT1-213ENST00000522414 SPATA31C1P0DKV0 1188 aa9.39□□□□□ -0.91
PVT1-213ENST00000522414 SNHG28P0DPA3 235 aa9.39□□□□□ -0.91
PVT1-213ENST00000522414 ALDH5A1P51649 535 aaPredicted RBP9.39□□□□□ -0.91
PVT1-213ENST00000522414 CCL23P55773 120 aa9.39□□□□□ -0.91
PVT1-213ENST00000522414 RPS6P62753 249 aaKnown RBP9.39□□□□□ -0.91
PVT1-213ENST00000522414 RNF207Q6ZRF8 634 aa9.39□□□□□ -0.91
PVT1-213ENST00000522414 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.39□□□□□ -0.91
PVT1-213ENST00000522414 PHTF2Q8N3S3 785 aa9.39□□□□□ -0.91
PVT1-213ENST00000522414 TMEM199Q8N511 208 aa9.39□□□□□ -0.91
PVT1-213ENST00000522414 MORC4Q8TE76 937 aa9.39□□□□□ -0.91
PVT1-213ENST00000522414 ESR2Q92731 530 aa9.39□□□□□ -0.91
PVT1-213ENST00000522414 VAT1LQ9HCJ6 419 aa9.39□□□□□ -0.91
PVT1-213ENST00000522414 ADD3Q9UEY8 706 aaKnown RBP9.39□□□□□ -0.91
PVT1-213ENST00000522414 RBM47A0AV96 593 aaKnown RBP9.38□□□□□ -0.91
PVT1-213ENST00000522414 B4E1Z4 1266 aa9.38□□□□□ -0.91
PVT1-213ENST00000522414 RBAK-RBAKDNI3L0D1 243 aa9.38□□□□□ -0.91
PVT1-213ENST00000522414 TLR3O15455 904 aaKnown RBP9.38□□□□□ -0.91
PVT1-213ENST00000522414 B4GALT4O60513 344 aa9.38□□□□□ -0.91
PVT1-213ENST00000522414 MYL3P08590 195 aa9.38□□□□□ -0.91
PVT1-213ENST00000522414 PPIGQ13427 754 aaKnown RBP eCLIP9.38□□□□□ -0.91
PVT1-213ENST00000522414 USH1GQ495M9 461 aa9.38□□□□□ -0.91
PVT1-213ENST00000522414 DUSP28Q4G0W2 176 aa9.38□□□□□ -0.91
PVT1-213ENST00000522414 LCE3BQ5TA77 95 aa9.38□□□□□ -0.91
PVT1-213ENST00000522414 OTOP2Q7RTS6 562 aa9.38□□□□□ -0.91
PVT1-213ENST00000522414 ZNF295-AS1Q8N0V1 137 aa9.38□□□□□ -0.91
PVT1-213ENST00000522414 MAFAQ8NHW3 353 aaPredicted RBP9.38□□□□□ -0.91
PVT1-213ENST00000522414 COPS5Q92905 334 aa9.38□□□□□ -0.91
PVT1-213ENST00000522414 IL25Q9H293 177 aa9.38□□□□□ -0.91
PVT1-213ENST00000522414 RNF41Q9H4P4 317 aaPredicted RBP9.38□□□□□ -0.91
PVT1-213ENST00000522414 ZNF576Q9H609 170 aa9.38□□□□□ -0.91
PVT1-213ENST00000522414 VTA1Q9NP79 307 aa9.38□□□□□ -0.91
PVT1-213ENST00000522414 AVENQ9NQS1 362 aaPredicted RBP9.38□□□□□ -0.91
PVT1-213ENST00000522414 TPSG1Q9NRR2 321 aa9.38□□□□□ -0.91
PVT1-213ENST00000522414 TRMT13Q9NUP7 481 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms