RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 LXNQ9BS40 222 aa23.91■■□□□ 1.42
R3HCC1-208ENST00000522012 KIAA1468Q9P260 1216 aa23.91■■□□□ 1.42
R3HCC1-208ENST00000522012 ZNFX1Q9P2E3 1918 aaKnown RBP23.91■■□□□ 1.42
R3HCC1-208ENST00000522012 MUTP22033 750 aa23.9■■□□□ 1.42
R3HCC1-208ENST00000522012 PSMC6P62333 389 aa23.9■■□□□ 1.42
R3HCC1-208ENST00000522012 ERO1AQ96HE7 468 aa23.9■■□□□ 1.42
R3HCC1-208ENST00000522012 MTRQ99707 1265 aa23.9■■□□□ 1.42
R3HCC1-208ENST00000522012 ZSWIM4Q9H7M6 989 aa23.9■■□□□ 1.42
R3HCC1-208ENST00000522012 KBTBD4Q9NVX7 518 aa23.9■■□□□ 1.42
R3HCC1-208ENST00000522012 LRRC37A2A6NM11 1700 aa23.9■■□□□ 1.42
R3HCC1-208ENST00000522012 SSBP05455 408 aaKnown RBP eCLIP23.89■■□□□ 1.42
R3HCC1-208ENST00000522012 CASP1P29466 404 aa23.89■■□□□ 1.42
R3HCC1-208ENST00000522012 QARSP47897 775 aaKnown RBP23.89■■□□□ 1.42
R3HCC1-208ENST00000522012 ZNF445P59923 1031 aa23.89■■□□□ 1.42
R3HCC1-208ENST00000522012 SASS6Q6UVJ0 657 aa23.89■■□□□ 1.42
R3HCC1-208ENST00000522012 ABHD15Q6UXT9 468 aa23.89■■□□□ 1.42
R3HCC1-208ENST00000522012 ZNF296Q8WUU4 475 aaPredicted RBP23.89■■□□□ 1.42
R3HCC1-208ENST00000522012 BLZF1Q9H2G9 400 aa23.89■■□□□ 1.42
R3HCC1-208ENST00000522012 WRAP73Q9P2S5 460 aaPredicted RBP23.89■■□□□ 1.42
R3HCC1-208ENST00000522012 TSKSQ9UJT2 592 aa23.89■■□□□ 1.42
R3HCC1-208ENST00000522012 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.89■■□□□ 1.41
R3HCC1-208ENST00000522012 GTPBP6O43824 516 aaPredicted RBP23.89■■□□□ 1.41
R3HCC1-208ENST00000522012 SUPT20HL2P0C7V6 817 aa23.89■■□□□ 1.41
R3HCC1-208ENST00000522012 PLA2G4BP0C869 781 aa23.89■■□□□ 1.41
R3HCC1-208ENST00000522012 LBX1P52954 281 aa23.89■■□□□ 1.41
R3HCC1-208ENST00000522012 PSMC5P62195 406 aa23.89■■□□□ 1.41
R3HCC1-208ENST00000522012 AMPD3Q01432 767 aa23.89■■□□□ 1.41
R3HCC1-208ENST00000522012 CCDC144BQ3MJ40 725 aa23.89■■□□□ 1.41
R3HCC1-208ENST00000522012 IQSEC1Q6DN90 963 aa23.89■■□□□ 1.41
R3HCC1-208ENST00000522012 SWSAP1Q6NVH7 229 aa23.89■■□□□ 1.41
R3HCC1-208ENST00000522012 KCTD17Q8N5Z5 321 aa23.89■■□□□ 1.41
R3HCC1-208ENST00000522012 PIGOQ8TEQ8 1089 aa23.89■■□□□ 1.41
R3HCC1-208ENST00000522012 SPATA33Q96N06 139 aa23.89■■□□□ 1.41
R3HCC1-208ENST00000522012 NACC1Q96RE7 527 aa23.89■■□□□ 1.41
R3HCC1-208ENST00000522012 GABBR1Q9UBS5 961 aa23.89■■□□□ 1.41
R3HCC1-208ENST00000522012 PCDHA5Q9Y5H7 936 aa23.89■■□□□ 1.41
R3HCC1-208ENST00000522012 NOP56O00567 594 aaKnown RBP23.88■■□□□ 1.41
R3HCC1-208ENST00000522012 BACH1O14867 736 aa23.88■■□□□ 1.41
R3HCC1-208ENST00000522012 SMC2O95347 1197 aa23.88■■□□□ 1.41
R3HCC1-208ENST00000522012 GH1P01241 217 aa23.88■■□□□ 1.41
R3HCC1-208ENST00000522012 UGCGQ16739 394 aa23.88■■□□□ 1.41
R3HCC1-208ENST00000522012 GJC2Q5T442 439 aaPredicted RBP23.88■■□□□ 1.41
R3HCC1-208ENST00000522012 MFSD14CQ5VZR4 134 aa23.88■■□□□ 1.41
R3HCC1-208ENST00000522012 SMARCE1Q969G3 411 aa23.88■■□□□ 1.41
R3HCC1-208ENST00000522012 SRRDQ9UH36 339 aa23.88■■□□□ 1.41
R3HCC1-208ENST00000522012 PLXNA1Q9UIW2 1896 aa23.87■■□□□ 1.41
R3HCC1-208ENST00000522012 ATG7O95352 703 aa23.87■■□□□ 1.41
R3HCC1-208ENST00000522012 IGHA2P01877 340 aa23.87■■□□□ 1.41
R3HCC1-208ENST00000522012 ZNF865P0CJ78 1059 aaPredicted RBP23.87■■□□□ 1.41
R3HCC1-208ENST00000522012 SMPD1P17405 629 aa23.87■■□□□ 1.41
R3HCC1-208ENST00000522012 PTGS1P23219 599 aa23.87■■□□□ 1.41
R3HCC1-208ENST00000522012 DPYDQ12882 1025 aa23.87■■□□□ 1.41
R3HCC1-208ENST00000522012 CUL4BQ13620 913 aa23.87■■□□□ 1.41
R3HCC1-208ENST00000522012 LAMC2Q13753 1193 aa23.87■■□□□ 1.41
R3HCC1-208ENST00000522012 ARHGEF6Q15052 776 aa23.87■■□□□ 1.41
R3HCC1-208ENST00000522012 LRSAM1Q6UWE0 723 aa23.87■■□□□ 1.41
R3HCC1-208ENST00000522012 SEPT1Q8WYJ6 367 aa23.87■■□□□ 1.41
R3HCC1-208ENST00000522012 TRIB2Q92519 343 aa23.87■■□□□ 1.41
R3HCC1-208ENST00000522012 LRRC27Q9C0I9 530 aa23.87■■□□□ 1.41
R3HCC1-208ENST00000522012 GSTTP1A0A1W2PQM5 241 aa23.86■■□□□ 1.41
R3HCC1-208ENST00000522012 BIN1O00499 593 aa23.86■■□□□ 1.41
R3HCC1-208ENST00000522012 ZBTB39O15060 712 aa23.86■■□□□ 1.41
R3HCC1-208ENST00000522012 EYA4O95677 639 aa23.86■■□□□ 1.41
R3HCC1-208ENST00000522012 GNRH1P01148 92 aa23.86■■□□□ 1.41
R3HCC1-208ENST00000522012 TNFAIP2Q03169 654 aa23.86■■□□□ 1.41
R3HCC1-208ENST00000522012 DUSP28Q4G0W2 176 aa23.86■■□□□ 1.41
R3HCC1-208ENST00000522012 TRMT44Q8IYL2 757 aaKnown RBP23.86■■□□□ 1.41
R3HCC1-208ENST00000522012 ATP6V0A1Q93050 837 aa23.86■■□□□ 1.41
R3HCC1-208ENST00000522012 GPR20Q99678 358 aa23.86■■□□□ 1.41
R3HCC1-208ENST00000522012 CCDC192P0DO97 292 aa23.85■■□□□ 1.41
R3HCC1-208ENST00000522012 ARHGAP1Q07960 439 aa23.85■■□□□ 1.41
R3HCC1-208ENST00000522012 IRF5Q13568 498 aa23.85■■□□□ 1.41
R3HCC1-208ENST00000522012 HSDL1Q3SXM5 330 aa23.85■■□□□ 1.41
R3HCC1-208ENST00000522012 TRMT1LQ7Z2T5 733 aaKnown RBP23.85■■□□□ 1.41
R3HCC1-208ENST00000522012 CCDC60Q8IWA6 550 aaPredicted RBP23.85■■□□□ 1.41
R3HCC1-208ENST00000522012 C4orf19Q8IY42 314 aa23.85■■□□□ 1.41
R3HCC1-208ENST00000522012 BHMT2Q9H2M3 363 aa23.85■■□□□ 1.41
R3HCC1-208ENST00000522012 ZNF302Q9NR11 478 aa23.85■■□□□ 1.41
R3HCC1-208ENST00000522012 TUBE1Q9UJT0 475 aa23.85■■□□□ 1.41
R3HCC1-208ENST00000522012 NKRFO15226 690 aaKnown RBP eCLIP23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 DKC1O60832 514 aaKnown RBP eCLIP23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 LYPLA2O95372 231 aa23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 MYL1P05976 194 aa23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 HSPA8P11142 646 aaKnown RBP23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 TCF7P36402 384 aaPredicted RBP23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 SLC12A3P55017 1021 aa23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 TYRO3Q06418 890 aa23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 ISM2Q6H9L7 571 aa23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 GPBP1Q86WP2 473 aa23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 SYT2Q8N9I0 419 aaPredicted RBP23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 C7orf25Q9BPX7 421 aa23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 TRIM9Q9C026 710 aa23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 ZSWIM8A7E2V4 1837 aa23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 MYMKA6NI61 221 aa23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 TSPY26PQ9H489 355 aa23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 BMP2KQ9NSY1 1161 aaPredicted RBP23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 FAM184BQ9ULE4 1060 aa23.84■■□□□ 1.41
R3HCC1-208ENST00000522012 ELNP15502 786 aa23.83■■□□□ 1.41
R3HCC1-208ENST00000522012 YWHABP31946 246 aaKnown RBP23.83■■□□□ 1.41
R3HCC1-208ENST00000522012 SARSP49591 514 aaKnown RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms