RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 LGALS2P05162 132 aa27.11■■□□□ 1.93
PVT1-212ENST00000521951 GJB1P08034 283 aa27.11■■□□□ 1.93
PVT1-212ENST00000521951 SPATA31C1P0DKV0 1188 aa27.11■■□□□ 1.93
PVT1-212ENST00000521951 RPA1P27694 616 aa27.11■■□□□ 1.93
PVT1-212ENST00000521951 CCT6AP40227 531 aaKnown RBP27.11■■□□□ 1.93
PVT1-212ENST00000521951 CYP4A11Q02928 519 aa27.11■■□□□ 1.93
PVT1-212ENST00000521951 CTTNQ14247 550 aaKnown RBP27.11■■□□□ 1.93
PVT1-212ENST00000521951 RESP18Q5W5W9 173 aa27.11■■□□□ 1.93
PVT1-212ENST00000521951 HAUS3Q68CZ6 603 aa27.11■■□□□ 1.93
PVT1-212ENST00000521951 RNF180Q86T96 592 aa27.11■■□□□ 1.93
PVT1-212ENST00000521951 CATSPER3Q86XQ3 398 aa27.11■■□□□ 1.93
PVT1-212ENST00000521951 NEK9Q8TD19 979 aa27.11■■□□□ 1.93
PVT1-212ENST00000521951 CCSER1Q9C0I3 900 aa27.11■■□□□ 1.93
PVT1-212ENST00000521951 ZNF302Q9NR11 478 aa27.11■■□□□ 1.93
PVT1-212ENST00000521951 A0A1W2PQ27 194 aa27.1■■□□□ 1.93
PVT1-212ENST00000521951 A0A1W2PQ64 194 aa27.1■■□□□ 1.93
PVT1-212ENST00000521951 A0A1W2PQD8 194 aa27.1■■□□□ 1.93
PVT1-212ENST00000521951 GOLGA6L4A6NEF3 574 aa27.1■■□□□ 1.93
PVT1-212ENST00000521951 GADD45BO75293 160 aaPredicted RBP27.1■■□□□ 1.93
PVT1-212ENST00000521951 MYL3P08590 195 aa27.1■■□□□ 1.93
PVT1-212ENST00000521951 CMA1P23946 247 aa27.1■■□□□ 1.93
PVT1-212ENST00000521951 STAT5BP51692 787 aa27.1■■□□□ 1.93
PVT1-212ENST00000521951 UGCGQ16739 394 aa27.1■■□□□ 1.93
PVT1-212ENST00000521951 FAM160B1Q5W0V3 765 aa27.1■■□□□ 1.93
PVT1-212ENST00000521951 CCSAPQ6IQ19 270 aaPredicted RBP27.1■■□□□ 1.93
PVT1-212ENST00000521951 ARRDC4Q8NCT1 418 aa27.1■■□□□ 1.93
PVT1-212ENST00000521951 AZI2Q9H6S1 392 aa27.1■■□□□ 1.93
PVT1-212ENST00000521951 TUFT1Q9NNX1 390 aa27.1■■□□□ 1.93
PVT1-212ENST00000521951 OGDHLQ9ULD0 1010 aa27.1■■□□□ 1.93
PVT1-212ENST00000521951 EMSYQ7Z589 1322 aa27.1■■□□□ 1.93
PVT1-212ENST00000521951 ZEB2O60315 1214 aa27.09■■□□□ 1.93
PVT1-212ENST00000521951 SGPL1O95470 568 aa27.09■■□□□ 1.93
PVT1-212ENST00000521951 ZNF286BP0CG31 522 aa27.09■■□□□ 1.93
PVT1-212ENST00000521951 QARSP47897 775 aaKnown RBP27.09■■□□□ 1.93
PVT1-212ENST00000521951 KCNA10Q16322 511 aa27.09■■□□□ 1.93
PVT1-212ENST00000521951 TRIM50Q86XT4 487 aa27.09■■□□□ 1.93
PVT1-212ENST00000521951 TPH2Q8IWU9 490 aa27.09■■□□□ 1.93
PVT1-212ENST00000521951 AFAP1L1Q8TED9 768 aa27.09■■□□□ 1.93
PVT1-212ENST00000521951 GLG1Q92896 1179 aa27.09■■□□□ 1.93
PVT1-212ENST00000521951 C16orf70Q9BSU1 422 aa27.09■■□□□ 1.93
PVT1-212ENST00000521951 SMARCAD1Q9H4L7 1026 aa27.09■■□□□ 1.93
PVT1-212ENST00000521951 MAFBQ9Y5Q3 323 aaPredicted RBP27.09■■□□□ 1.93
PVT1-212ENST00000521951 KPNA6O60684 536 aa27.08■■□□□ 1.93
PVT1-212ENST00000521951 PSMC5P62195 406 aa27.08■■□□□ 1.93
PVT1-212ENST00000521951 ECM1Q16610 540 aa27.08■■□□□ 1.93
PVT1-212ENST00000521951 PLPPR4Q7Z2D5 763 aa27.08■■□□□ 1.93
PVT1-212ENST00000521951 PCSK9Q8NBP7 692 aaKnown RBP27.08■■□□□ 1.93
PVT1-212ENST00000521951 U2AF1L4Q8WU68 220 aaKnown RBP27.08■■□□□ 1.93
PVT1-212ENST00000521951 LXNQ9BS40 222 aa27.08■■□□□ 1.93
PVT1-212ENST00000521951 CRISPLD2Q9H0B8 497 aa27.08■■□□□ 1.93
PVT1-212ENST00000521951 WRAP73Q9P2S5 460 aaPredicted RBP27.08■■□□□ 1.93
PVT1-212ENST00000521951 IGSF9BQ9UPX0 1349 aa27.07■■□□□ 1.92
PVT1-212ENST00000521951 POTEB3A0JP26 581 aa27.07■■□□□ 1.92
PVT1-212ENST00000521951 TXLNAP40222 546 aa27.07■■□□□ 1.92
PVT1-212ENST00000521951 ZRSR1Q15695 479 aaKnown RBP27.07■■□□□ 1.92
PVT1-212ENST00000521951 PDXDC2PQ6P474 469 aa27.07■■□□□ 1.92
PVT1-212ENST00000521951 POTEBQ6S5H4 581 aa27.07■■□□□ 1.92
PVT1-212ENST00000521951 PNMA5Q96PV4 448 aa27.07■■□□□ 1.92
PVT1-212ENST00000521951 ZSWIM4Q9H7M6 989 aa27.07■■□□□ 1.92
PVT1-212ENST00000521951 FAM13BQ9NYF5 915 aa27.07■■□□□ 1.92
PVT1-212ENST00000521951 GOLGA6L22H0YM25 854 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 SLC26A4O43511 780 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 ZNF862O60290 1169 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 ASGR1P07306 291 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 ATP4AP20648 1035 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 PURAQ00577 322 aaKnown RBP27.06■■□□□ 1.92
PVT1-212ENST00000521951 GRB10Q13322 594 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 KARSQ15046 597 aaKnown RBP27.06■■□□□ 1.92
PVT1-212ENST00000521951 HYIQ5T013 277 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 COL13A1Q5TAT6 717 aaPredicted RBP27.06■■□□□ 1.92
PVT1-212ENST00000521951 FSIP1Q8NA03 581 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 ATP6V0A1Q93050 837 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 CALML4Q96GE6 196 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 LMBRD1Q9NUN5 540 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 A0A1B0GVL5 298 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 MUTP22033 750 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 MRPS27Q92552 414 aaKnown RBP27.06■■□□□ 1.92
PVT1-212ENST00000521951 KAT2BQ92831 832 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 PLIN2Q99541 437 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 TSEN34Q9BSV6 310 aaKnown RBP27.06■■□□□ 1.92
PVT1-212ENST00000521951 TMEM106CQ9BVX2 250 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 PANK2Q9BZ23 570 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 KIAA1024Q9UPX6 916 aa27.06■■□□□ 1.92
PVT1-212ENST00000521951 KIAA0100Q14667 2235 aaKnown RBP27.05■■□□□ 1.92
PVT1-212ENST00000521951 KDM3AQ9Y4C1 1321 aa27.05■■□□□ 1.92
PVT1-212ENST00000521951 H3BRB1 525 aa27.05■■□□□ 1.92
PVT1-212ENST00000521951 DKC1O60832 514 aaKnown RBP eCLIP27.05■■□□□ 1.927e-7■■■■□ 26.6
PVT1-212ENST00000521951 TFRCP02786 760 aaKnown RBP27.05■■□□□ 1.92
PVT1-212ENST00000521951 GJA8P48165 433 aa27.05■■□□□ 1.92
PVT1-212ENST00000521951 POTEGQ6S5H5 508 aa27.05■■□□□ 1.92
PVT1-212ENST00000521951 CXCL17Q6UXB2 119 aa27.05■■□□□ 1.92
PVT1-212ENST00000521951 C4orf19Q8IY42 314 aa27.05■■□□□ 1.92
PVT1-212ENST00000521951 CDK5RAP3Q96JB5 506 aa27.05■■□□□ 1.92
PVT1-212ENST00000521951 TUT1Q9H6E5 874 aaKnown RBP27.05■■□□□ 1.92
PVT1-212ENST00000521951 ERAP1Q9NZ08 941 aa27.05■■□□□ 1.92
PVT1-212ENST00000521951 CCDC39Q9UFE4 941 aa27.05■■□□□ 1.92
PVT1-212ENST00000521951 A0A087WWV3 80 aa27.04■■□□□ 1.92
PVT1-212ENST00000521951 A0A087X0B3 334 aa27.04■■□□□ 1.92
PVT1-212ENST00000521951 FAM237AA0A1B0GTK4 181 aa27.04■■□□□ 1.92
PVT1-212ENST00000521951 STBD1O95210 358 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms