RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 CLK2P49760 499 aaKnown RBP11.63□□□□□ -0.55
TRIM35-204ENST00000521283 SP2Q02086 613 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 SSRP1Q08945 709 aaKnown RBP11.63□□□□□ -0.55
TRIM35-204ENST00000521283 RBL2Q08999 1139 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 PTK7Q13308 1070 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 NTRK3Q16288 839 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 KIAA0753Q2KHM9 967 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 CEP55Q53EZ4 464 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 FAM43BQ6ZT52 329 aaPredicted RBP11.63□□□□□ -0.55
TRIM35-204ENST00000521283 CYFIP1Q7L576 1253 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 REXO1Q8N1G1 1221 aaKnown RBP11.63□□□□□ -0.55
TRIM35-204ENST00000521283 SEPT1Q8WYJ6 367 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 KAT2BQ92831 832 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 MXRA8Q9BRK3 442 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 PPP1R12CQ9BZL4 782 aa11.63□□□□□ -0.55
TRIM35-204ENST00000521283 TUT1Q9H6E5 874 aaKnown RBP11.63□□□□□ -0.55
TRIM35-204ENST00000521283 NFASCO94856 1347 aa11.62□□□□□ -0.55
TRIM35-204ENST00000521283 GPR37O15354 613 aa11.62□□□□□ -0.55
TRIM35-204ENST00000521283 CYP3A4P08684 503 aa11.62□□□□□ -0.55
TRIM35-204ENST00000521283 CSF2RAP15509 400 aa11.62□□□□□ -0.55
TRIM35-204ENST00000521283 ITGB5P18084 799 aa11.62□□□□□ -0.55
TRIM35-204ENST00000521283 CYP2C18P33260 490 aa11.62□□□□□ -0.55
TRIM35-204ENST00000521283 ZNF76P36508 570 aa11.62□□□□□ -0.55
TRIM35-204ENST00000521283 SETQ01105 290 aaPredicted RBP11.62□□□□□ -0.55
TRIM35-204ENST00000521283 TOB2Q14106 344 aaPredicted RBP11.62□□□□□ -0.55
TRIM35-204ENST00000521283 UBE2SQ16763 222 aa11.62□□□□□ -0.55
TRIM35-204ENST00000521283 HERVK_113Q902F9 699 aa11.62□□□□□ -0.55
TRIM35-204ENST00000521283 WASF1Q92558 559 aa11.62□□□□□ -0.55
TRIM35-204ENST00000521283 GPR20Q99678 358 aa11.62□□□□□ -0.55
TRIM35-204ENST00000521283 SDF4Q9BRK5 362 aa11.62□□□□□ -0.55
TRIM35-204ENST00000521283 C16orf70Q9BSU1 422 aa11.62□□□□□ -0.55
TRIM35-204ENST00000521283 SLC26A6Q9BXS9 759 aa11.62□□□□□ -0.55
TRIM35-204ENST00000521283 ANO3Q9BYT9 981 aa11.62□□□□□ -0.55
TRIM35-204ENST00000521283 TRMT13Q9NUP7 481 aaKnown RBP11.62□□□□□ -0.55
TRIM35-204ENST00000521283 TRIP12Q14669 1992 aaPredicted RBP11.61□□□□□ -0.55
TRIM35-204ENST00000521283 C17orf102A2RUQ5 167 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 MEIS1O00470 390 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 EFCAB14O75071 495 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 LGALS2P05162 132 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 KCNA2P16389 499 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 FECHP22830 423 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 PTGS1P23219 599 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 SLC26A2P50443 739 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 USP11P51784 963 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 COPS2P61201 443 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 SEMA3FQ13275 785 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 PKN1Q16512 942 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 TMEM240Q5SV17 173 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 C9orf50Q5SZB4 431 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 RASIP1Q5U651 963 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRIM35-204ENST00000521283 ALG1Q9BT22 464 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 SLKQ9H2G2 1235 aaPredicted RBP11.61□□□□□ -0.55
TRIM35-204ENST00000521283 SMARCAD1Q9H4L7 1026 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 JPH1Q9HDC5 661 aaPredicted RBP11.61□□□□□ -0.55
TRIM35-204ENST00000521283 KCNH7Q9NS40 1196 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 TBC1D22BQ9NU19 505 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 ERAP1Q9NZ08 941 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 HDAC6Q9UBN7 1215 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 TCEAL9Q9UHQ7 104 aa11.61□□□□□ -0.55
TRIM35-204ENST00000521283 EMSYQ7Z589 1322 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 NRCAMQ92823 1304 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 SZT2Q5T011 3432 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 SOX1O00570 391 aaPredicted RBP11.6□□□□□ -0.55
TRIM35-204ENST00000521283 BAIAP3O94812 1187 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 IQCF3P0C7M6 154 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 SELPP16109 830 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 NLRP5P59047 1200 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 CHMP4BP1P59074 171 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 CCT2P78371 535 aaKnown RBP11.6□□□□□ -0.55
TRIM35-204ENST00000521283 ARHGAP4P98171 946 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 HIC1Q14526 733 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 RAB30Q15771 203 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 ZNF697Q5TEC3 545 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 SMYD5Q6GMV2 418 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 GDF6Q6KF10 455 aaPredicted RBP11.6□□□□□ -0.55
TRIM35-204ENST00000521283 ZNF365Q70YC5 407 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 DEFB123Q8N688 67 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 PHOSPHO2Q8TCD6 241 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 PHKBQ93100 1093 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 UPF3BQ9BZI7 483 aaKnown RBP11.6□□□□□ -0.55
TRIM35-204ENST00000521283 AZI2Q9H6S1 392 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 SLC9A2Q9UBY0 812 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 STK36Q9NRP7 1315 aa11.6□□□□□ -0.55
TRIM35-204ENST00000521283 TANC1Q9C0D5 1861 aa11.59□□□□□ -0.55
TRIM35-204ENST00000521283 RRN3P2A6NIE6 340 aa11.59□□□□□ -0.55
TRIM35-204ENST00000521283 PFKFB2O60825 505 aa11.59□□□□□ -0.55
TRIM35-204ENST00000521283 ZNF286BP0CG31 522 aa11.59□□□□□ -0.55
TRIM35-204ENST00000521283 CYP2C9P11712 490 aa11.59□□□□□ -0.55
TRIM35-204ENST00000521283 HOXC8P31273 242 aa11.59□□□□□ -0.55
TRIM35-204ENST00000521283 TCF7P36402 384 aaPredicted RBP11.59□□□□□ -0.55
TRIM35-204ENST00000521283 CCL23P55773 120 aa11.59□□□□□ -0.55
TRIM35-204ENST00000521283 C16orf59Q7L2K0 433 aa11.59□□□□□ -0.55
TRIM35-204ENST00000521283 PLPPR4Q7Z2D5 763 aa11.59□□□□□ -0.55
TRIM35-204ENST00000521283 DAGLBQ8NCG7 672 aa11.59□□□□□ -0.55
TRIM35-204ENST00000521283 CRYGNQ8WXF5 182 aa11.59□□□□□ -0.55
TRIM35-204ENST00000521283 NAP1L4Q99733 375 aaKnown RBP11.59□□□□□ -0.55
TRIM35-204ENST00000521283 WNT8AQ9H1J5 351 aa11.59□□□□□ -0.55
TRIM35-204ENST00000521283 PCDHA4Q9UN74 947 aa11.59□□□□□ -0.55
TRIM35-204ENST00000521283 DOCK5Q9H7D0 1870 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms