RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 EXTL1Q92935 676 aa6.66□□□□□ -1.34
CLK4-207ENST00000520909 KIAA1522Q9P206 1035 aaPredicted RBP6.66□□□□□ -1.34
CLK4-207ENST00000520909 R3HCC1Q9Y3T6 440 aaKnown RBP6.66□□□□□ -1.34
CLK4-207ENST00000520909 TELO2Q9Y4R8 837 aa6.66□□□□□ -1.34
CLK4-207ENST00000520909 CR2P20023 1033 aa6.65□□□□□ -1.35
CLK4-207ENST00000520909 ACO1P21399 889 aaKnown RBP6.65□□□□□ -1.35
CLK4-207ENST00000520909 GNL2Q13823 731 aaKnown RBP6.65□□□□□ -1.35
CLK4-207ENST00000520909 HABP4Q5JVS0 413 aaKnown RBP6.65□□□□□ -1.35
CLK4-207ENST00000520909 KCNT2Q6UVM3 1135 aa6.65□□□□□ -1.35
CLK4-207ENST00000520909 IFNL3Q8IZI9 196 aa6.65□□□□□ -1.35
CLK4-207ENST00000520909 SGSM3Q96HU1 749 aa6.65□□□□□ -1.35
CLK4-207ENST00000520909 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.65□□□□□ -1.352e-6■■■□□ 15
CLK4-207ENST00000520909 C11orf21Q9P2W6 132 aa6.65□□□□□ -1.35
CLK4-207ENST00000520909 WDR33Q9C0J8 1336 aaKnown RBP6.65□□□□□ -1.35
CLK4-207ENST00000520909 ESYT3A0FGR9 886 aa6.64□□□□□ -1.35
CLK4-207ENST00000520909 FAM47E-STBD1D6RA91 191 aa6.64□□□□□ -1.35
CLK4-207ENST00000520909 ACOT7O00154 380 aa6.64□□□□□ -1.35
CLK4-207ENST00000520909 RAD17O75943 681 aa6.64□□□□□ -1.35
CLK4-207ENST00000520909 ZNF202O95125 648 aa6.64□□□□□ -1.35
CLK4-207ENST00000520909 SOD2P04179 222 aa6.64□□□□□ -1.35
CLK4-207ENST00000520909 MCM7P33993 719 aa6.64□□□□□ -1.35
CLK4-207ENST00000520909 GPR85P60893 370 aa6.64□□□□□ -1.35
CLK4-207ENST00000520909 PTH1RQ03431 593 aa6.64□□□□□ -1.35
CLK4-207ENST00000520909 LSM12Q3MHD2 195 aaKnown RBP6.64□□□□□ -1.35
CLK4-207ENST00000520909 ZMAT1Q5H9K5 638 aa6.64□□□□□ -1.35
CLK4-207ENST00000520909 OAZ3Q9UMX2 235 aa6.64□□□□□ -1.35
CLK4-207ENST00000520909 IQCA1LA6NCM1 817 aa6.63□□□□□ -1.35
CLK4-207ENST00000520909 PLSCR1O15162 318 aa6.63□□□□□ -1.35
CLK4-207ENST00000520909 PRODHO43272 600 aa6.63□□□□□ -1.35
CLK4-207ENST00000520909 PURAQ00577 322 aaKnown RBP6.63□□□□□ -1.35
CLK4-207ENST00000520909 RNF151Q2KHN1 245 aa6.63□□□□□ -1.35
CLK4-207ENST00000520909 Q6ZSN1 163 aa6.63□□□□□ -1.35
CLK4-207ENST00000520909 POLNQ7Z5Q5 900 aa6.63□□□□□ -1.35
CLK4-207ENST00000520909 CHFRQ96EP1 664 aa6.63□□□□□ -1.35
CLK4-207ENST00000520909 FAM89AQ96GI7 184 aa6.63□□□□□ -1.35
CLK4-207ENST00000520909 SCYL1Q96KG9 808 aa6.63□□□□□ -1.35
CLK4-207ENST00000520909 AARSD1Q9BTE6 412 aaKnown RBP6.63□□□□□ -1.35
CLK4-207ENST00000520909 SLC39A2Q9NP94 309 aa6.63□□□□□ -1.35
CLK4-207ENST00000520909 ST7Q9NRC1 585 aa6.63□□□□□ -1.35
CLK4-207ENST00000520909 CDC14BO60729 498 aa6.62□□□□□ -1.35
CLK4-207ENST00000520909 FGFR1P11362 822 aa6.62□□□□□ -1.35
CLK4-207ENST00000520909 DBPQ10586 325 aaPredicted RBP6.62□□□□□ -1.35
CLK4-207ENST00000520909 TOP3AQ13472 1001 aaPredicted RBP6.62□□□□□ -1.35
CLK4-207ENST00000520909 IGFL4Q6B9Z1 124 aa6.62□□□□□ -1.35
CLK4-207ENST00000520909 NSMFQ6X4W1 530 aa6.62□□□□□ -1.35
CLK4-207ENST00000520909 C1orf210Q8IVY1 113 aa6.62□□□□□ -1.35
CLK4-207ENST00000520909 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.62□□□□□ -1.35
CLK4-207ENST00000520909 C12orf65Q9H3J6 166 aaKnown RBP6.62□□□□□ -1.35
CLK4-207ENST00000520909 ZNF408Q9H9D4 720 aa6.62□□□□□ -1.35
CLK4-207ENST00000520909 NR2E1Q9Y466 385 aa6.62□□□□□ -1.35
CLK4-207ENST00000520909 NARSO43776 548 aaKnown RBP6.61□□□□□ -1.35
CLK4-207ENST00000520909 PABPC1P11940 636 aaKnown RBP6.61□□□□□ -1.35
CLK4-207ENST00000520909 RRADP55042 308 aa6.61□□□□□ -1.35
CLK4-207ENST00000520909 DPTQ07507 201 aa6.61□□□□□ -1.35
CLK4-207ENST00000520909 NOLC1Q14978 699 aaKnown RBP eCLIP6.61□□□□□ -1.35
CLK4-207ENST00000520909 NTRK3Q16288 839 aa6.61□□□□□ -1.35
CLK4-207ENST00000520909 SMN1Q16637 294 aaKnown RBP6.61□□□□□ -1.35
CLK4-207ENST00000520909 BTBD8Q5XKL5 378 aa6.61□□□□□ -1.35
CLK4-207ENST00000520909 STYK1Q6J9G0 422 aa6.61□□□□□ -1.35
CLK4-207ENST00000520909 DPH6Q7L8W6 267 aa6.61□□□□□ -1.35
CLK4-207ENST00000520909 OR14A2Q96R54 314 aa6.61□□□□□ -1.35
CLK4-207ENST00000520909 CEP89Q96ST8 783 aa6.61□□□□□ -1.35
CLK4-207ENST00000520909 ALG1Q9BT22 464 aa6.61□□□□□ -1.35
CLK4-207ENST00000520909 IPPKQ9H8X2 491 aa6.61□□□□□ -1.35
CLK4-207ENST00000520909 SLC30A1Q9Y6M5 507 aa6.61□□□□□ -1.35
CLK4-207ENST00000520909 ERCC5P28715 1186 aaPredicted RBP6.6□□□□□ -1.35
CLK4-207ENST00000520909 IFRD2Q12894 506 aaPredicted RBP6.6□□□□□ -1.35
CLK4-207ENST00000520909 WDR72Q3MJ13 1102 aa6.6□□□□□ -1.35
CLK4-207ENST00000520909 NLGN4XQ8N0W4 816 aa6.6□□□□□ -1.35
CLK4-207ENST00000520909 AMER2Q8N7J2 671 aa6.6□□□□□ -1.35
CLK4-207ENST00000520909 OSBP2Q969R2 916 aa6.6□□□□□ -1.35
CLK4-207ENST00000520909 DPYSL5Q9BPU6 564 aa6.6□□□□□ -1.35
CLK4-207ENST00000520909 TRIM8Q9BZR9 551 aa6.6□□□□□ -1.35
CLK4-207ENST00000520909 CD244Q9BZW8 370 aa6.6□□□□□ -1.35
CLK4-207ENST00000520909 ARHGAP28Q9P2N2 729 aa6.6□□□□□ -1.35
CLK4-207ENST00000520909 UNC13AQ9UPW8 1703 aa6.6□□□□□ -1.35
CLK4-207ENST00000520909 RPS19P39019 145 aaKnown RBP6.59□□□□□ -1.35
CLK4-207ENST00000520909 ETV4P43268 484 aa6.59□□□□□ -1.35
CLK4-207ENST00000520909 INHBEP58166 350 aa6.59□□□□□ -1.35
CLK4-207ENST00000520909 DGCR2P98153 550 aa6.59□□□□□ -1.35
CLK4-207ENST00000520909 MAMDC4Q6UXC1 1216 aa6.59□□□□□ -1.35
CLK4-207ENST00000520909 PLEKHG4BQ96PX9 1271 aa6.59□□□□□ -1.35
CLK4-207ENST00000520909 BICRAQ9NZM4 1560 aa6.58□□□□□ -1.36
CLK4-207ENST00000520909 UNCXA6NJT0 531 aa6.58□□□□□ -1.36
CLK4-207ENST00000520909 DDR2Q16832 855 aa6.58□□□□□ -1.36
CLK4-207ENST00000520909 PLA2G12BQ9BX93 195 aa6.58□□□□□ -1.36
CLK4-207ENST00000520909 ARHGEF4Q9NR80 690 aa6.58□□□□□ -1.36
CLK4-207ENST00000520909 RIC8BQ9NVN3 520 aa6.58□□□□□ -1.36
CLK4-207ENST00000520909 PUF60Q9UHX1 559 aaKnown RBP6.58□□□□□ -1.36
CLK4-207ENST00000520909 FBXO10Q9UK96 956 aa6.58□□□□□ -1.36
CLK4-207ENST00000520909 TRAV20A0A0B4J274 112 aa6.57□□□□□ -1.36
CLK4-207ENST00000520909 BLACEA4D250 179 aa6.57□□□□□ -1.36
CLK4-207ENST00000520909 PTPN1P18031 435 aaKnown RBP6.57□□□□□ -1.36
CLK4-207ENST00000520909 ARID5AQ03989 594 aa6.57□□□□□ -1.36
CLK4-207ENST00000520909 EP400NLQ6ZTU2 488 aa6.57□□□□□ -1.36
CLK4-207ENST00000520909 CXXC5Q7LFL8 322 aaKnown RBP6.57□□□□□ -1.36
CLK4-207ENST00000520909 CELF2-AS1Q8N7Q2 184 aa6.57□□□□□ -1.36
CLK4-207ENST00000520909 SH3RF2Q8TEC5 729 aa6.57□□□□□ -1.36
CLK4-207ENST00000520909 HNRNPLLQ8WVV9 542 aaKnown RBP6.57□□□□□ -1.36
CLK4-207ENST00000520909 ZDHHC5Q9C0B5 715 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms