RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 PFKMP08237 780 aa18.41■□□□□ 0.54
TNPO1-212ENST00000520850 CYP2C9P11712 490 aa18.41■□□□□ 0.54
TNPO1-212ENST00000520850 U2AF2P26368 475 aaKnown RBP eCLIP18.41■□□□□ 0.541e-12■■■■■ 32.6
TNPO1-212ENST00000520850 TRAPPC10P48553 1259 aa18.41■□□□□ 0.54
TNPO1-212ENST00000520850 JAK3P52333 1124 aa18.41■□□□□ 0.54
TNPO1-212ENST00000520850 LRIT3Q3SXY7 679 aa18.41■□□□□ 0.54
TNPO1-212ENST00000520850 LRCH2Q5VUJ6 765 aa18.41■□□□□ 0.54
TNPO1-212ENST00000520850 RETREG2Q8NC44 543 aa18.41■□□□□ 0.54
TNPO1-212ENST00000520850 SNX21Q969T3 373 aa18.41■□□□□ 0.54
TNPO1-212ENST00000520850 TEKT3Q9BXF9 490 aa18.41■□□□□ 0.54
TNPO1-212ENST00000520850 MBLAC1A4D2B0 266 aaPredicted RBP18.4■□□□□ 0.54
TNPO1-212ENST00000520850 CCNT1O60563 726 aaKnown RBP18.4■□□□□ 0.54
TNPO1-212ENST00000520850 IQCF3P0C7M6 154 aa18.4■□□□□ 0.54
TNPO1-212ENST00000520850 CYP2C18P33260 490 aa18.4■□□□□ 0.54
TNPO1-212ENST00000520850 HIC1Q14526 733 aa18.4■□□□□ 0.54
TNPO1-212ENST00000520850 TRIM50Q86XT4 487 aa18.4■□□□□ 0.54
TNPO1-212ENST00000520850 SLFN12Q8IYM2 578 aa18.4■□□□□ 0.54
TNPO1-212ENST00000520850 ATP6V0A1Q93050 837 aa18.4■□□□□ 0.54
TNPO1-212ENST00000520850 INTS4Q96HW7 963 aaKnown RBP18.4■□□□□ 0.54
TNPO1-212ENST00000520850 WNT8AQ9H1J5 351 aa18.4■□□□□ 0.54
TNPO1-212ENST00000520850 IL23AQ9NPF7 189 aa18.4■□□□□ 0.54
TNPO1-212ENST00000520850 ZNF302Q9NR11 478 aa18.4■□□□□ 0.54
TNPO1-212ENST00000520850 HBP1O60381 514 aa18.39■□□□□ 0.53
TNPO1-212ENST00000520850 CHMP4BP1P59074 171 aa18.39■□□□□ 0.53
TNPO1-212ENST00000520850 PPP2R5CQ13362 524 aa18.39■□□□□ 0.53
TNPO1-212ENST00000520850 PLCB4Q15147 1175 aa18.39■□□□□ 0.53
TNPO1-212ENST00000520850 TRIM71Q2Q1W2 868 aaKnown RBP18.39■□□□□ 0.53
TNPO1-212ENST00000520850 SWSAP1Q6NVH7 229 aa18.39■□□□□ 0.53
TNPO1-212ENST00000520850 TAF2Q6P1X5 1199 aa18.39■□□□□ 0.53
TNPO1-212ENST00000520850 PPP1R12CQ9BZL4 782 aa18.39■□□□□ 0.53
TNPO1-212ENST00000520850 DISC1Q9NRI5 854 aa18.39■□□□□ 0.53
TNPO1-212ENST00000520850 SETD4Q9NVD3 440 aa18.39■□□□□ 0.53
TNPO1-212ENST00000520850 KAT6AQ92794 2004 aa18.39■□□□□ 0.53
TNPO1-212ENST00000520850 POTEB3A0JP26 581 aa18.38■□□□□ 0.53
TNPO1-212ENST00000520850 DDX39AO00148 427 aaKnown RBP18.38■□□□□ 0.53
TNPO1-212ENST00000520850 SLC37A4O43826 429 aa18.38■□□□□ 0.53
TNPO1-212ENST00000520850 BAG4O95429 457 aaKnown RBP18.38■□□□□ 0.53
TNPO1-212ENST00000520850 CKBP12277 381 aa18.38■□□□□ 0.53
TNPO1-212ENST00000520850 CSF2RAP15509 400 aa18.38■□□□□ 0.53
TNPO1-212ENST00000520850 SELPP16109 830 aa18.38■□□□□ 0.53
TNPO1-212ENST00000520850 PPFIA1Q13136 1202 aa18.38■□□□□ 0.53
TNPO1-212ENST00000520850 PSRC1Q6PGN9 363 aaPredicted RBP18.38■□□□□ 0.53
TNPO1-212ENST00000520850 POTEBQ6S5H4 581 aa18.38■□□□□ 0.53
TNPO1-212ENST00000520850 C16orf59Q7L2K0 433 aa18.38■□□□□ 0.53
TNPO1-212ENST00000520850 NOSTRINQ8IVI9 506 aa18.38■□□□□ 0.53
TNPO1-212ENST00000520850 CCDC60Q8IWA6 550 aaPredicted RBP18.38■□□□□ 0.53
TNPO1-212ENST00000520850 ATP8B4Q8TF62 1192 aa18.38■□□□□ 0.53
TNPO1-212ENST00000520850 LMBR1Q8WVP7 490 aa18.38■□□□□ 0.53
TNPO1-212ENST00000520850 BBXQ8WY36 941 aaPredicted RBP18.38■□□□□ 0.53
TNPO1-212ENST00000520850 DHX38Q92620 1227 aaKnown RBP18.38■□□□□ 0.53
TNPO1-212ENST00000520850 HAS1Q92839 578 aa18.38■□□□□ 0.53
TNPO1-212ENST00000520850 SMC3Q9UQE7 1217 aa18.38■□□□□ 0.53
TNPO1-212ENST00000520850 COL1A2P08123 1366 aa18.38■□□□□ 0.53
TNPO1-212ENST00000520850 BACH1O14867 736 aa18.37■□□□□ 0.53
TNPO1-212ENST00000520850 TREHO43280 583 aa18.37■□□□□ 0.53
TNPO1-212ENST00000520850 INSRRP14616 1297 aa18.37■□□□□ 0.53
TNPO1-212ENST00000520850 GJB2P29033 226 aa18.37■□□□□ 0.53
TNPO1-212ENST00000520850 ZNF200P98182 395 aaPredicted RBP18.37■□□□□ 0.53
TNPO1-212ENST00000520850 GRIK4Q16099 956 aa18.37■□□□□ 0.53
TNPO1-212ENST00000520850 ZNF484Q5JVG2 852 aa18.37■□□□□ 0.53
TNPO1-212ENST00000520850 MARCH8Q5T0T0 291 aa18.37■□□□□ 0.53
TNPO1-212ENST00000520850 RASIP1Q5U651 963 aa18.37■□□□□ 0.53
TNPO1-212ENST00000520850 PDXDC2PQ6P474 469 aa18.37■□□□□ 0.53
TNPO1-212ENST00000520850 FAM43BQ6ZT52 329 aaPredicted RBP18.37■□□□□ 0.53
TNPO1-212ENST00000520850 PPP1R13LQ8WUF5 828 aa18.37■□□□□ 0.53
TNPO1-212ENST00000520850 FAM167AQ96KS9 214 aa18.37■□□□□ 0.53
TNPO1-212ENST00000520850 UNC45AQ9H3U1 944 aa18.37■□□□□ 0.53
TNPO1-212ENST00000520850 UMODL1Q5DID0 1318 aa18.37■□□□□ 0.53
TNPO1-212ENST00000520850 TRIP12Q14669 1992 aaPredicted RBP18.37■□□□□ 0.53
TNPO1-212ENST00000520850 FAM205CA6NFA0 338 aa18.36■□□□□ 0.53
TNPO1-212ENST00000520850 ATP4AP20648 1035 aa18.36■□□□□ 0.53
TNPO1-212ENST00000520850 EPHB4P54760 987 aa18.36■□□□□ 0.53
TNPO1-212ENST00000520850 CCL23P55773 120 aa18.36■□□□□ 0.53
TNPO1-212ENST00000520850 GUCY1B3Q02153 619 aa18.36■□□□□ 0.53
TNPO1-212ENST00000520850 SHHQ15465 462 aa18.36■□□□□ 0.53
TNPO1-212ENST00000520850 FAM26DQ5JW98 314 aa18.36■□□□□ 0.53
TNPO1-212ENST00000520850 TMEM240Q5SV17 173 aa18.36■□□□□ 0.53
TNPO1-212ENST00000520850 GPR153Q6NV75 609 aa18.36■□□□□ 0.53
TNPO1-212ENST00000520850 VWCEQ96DN2 955 aa18.36■□□□□ 0.53
TNPO1-212ENST00000520850 MTMR9Q96QG7 549 aa18.36■□□□□ 0.53
TNPO1-212ENST00000520850 VAV3Q9UKW4 847 aa18.36■□□□□ 0.53
TNPO1-212ENST00000520850 CEP131Q9UPN4 1083 aa18.36■□□□□ 0.53
TNPO1-212ENST00000520850 IGSF9BQ9UPX0 1349 aa18.36■□□□□ 0.53
TNPO1-212ENST00000520850 SAMM50Q9Y512 469 aa18.36■□□□□ 0.53
TNPO1-212ENST00000520850 DKC1O60832 514 aaKnown RBP eCLIP18.35■□□□□ 0.53
TNPO1-212ENST00000520850 FGBP02675 491 aa18.35■□□□□ 0.53
TNPO1-212ENST00000520850 CXCL10P02778 98 aa18.35■□□□□ 0.53
TNPO1-212ENST00000520850 MARK3P27448 753 aa18.35■□□□□ 0.53
TNPO1-212ENST00000520850 TRAF7Q6Q0C0 670 aa18.35■□□□□ 0.53
TNPO1-212ENST00000520850 LRRC8DQ7L1W4 858 aa18.35■□□□□ 0.53
TNPO1-212ENST00000520850 MIER3Q7Z3K6 550 aa18.35■□□□□ 0.53
TNPO1-212ENST00000520850 NME8Q8N427 588 aa18.35■□□□□ 0.53
TNPO1-212ENST00000520850 HERVK_113Q902F9 699 aa18.35■□□□□ 0.53
TNPO1-212ENST00000520850 NRBP2Q9NSY0 501 aa18.35■□□□□ 0.53
TNPO1-212ENST00000520850 GABBR1Q9UBS5 961 aa18.35■□□□□ 0.53
TNPO1-212ENST00000520850 TUBE1Q9UJT0 475 aa18.35■□□□□ 0.53
TNPO1-212ENST00000520850 PCDHA12Q9UN75 941 aa18.35■□□□□ 0.53
TNPO1-212ENST00000520850 PCDHA2Q9Y5H9 948 aa18.35■□□□□ 0.53
TNPO1-212ENST00000520850 MYH9P35579 1960 aaKnown RBP18.35■□□□□ 0.53
TNPO1-212ENST00000520850 SMIM35A0A1B0GVV1 85 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms