RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 Q4G0T1 1027 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 FAM47CQ5HY64 1035 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 GJC2Q5T442 439 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 LRCH2Q5VUJ6 765 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 KRT40Q6A162 431 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 ATL3Q6DD88 541 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 TAPT1Q6NXT6 567 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 PIK3AP1Q6ZUJ8 805 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 OTUD6AQ7L8S5 288 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 TMEM199Q8N511 208 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 RASSF8Q8NHQ8 419 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 SYAP1Q96A49 352 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 PAWRQ96IZ0 340 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 ZNF396Q96N95 335 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 PYM1Q9BRP8 204 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 KCNH7Q9NS40 1196 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 NRBP2Q9NSY0 501 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 KCNG1Q9UIX4 513 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 DDX41Q9UJV9 622 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 GNEQ9Y223 722 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 ZDHHC9Q9Y397 364 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 UBIAD1Q9Y5Z9 338 aa6.34□□□□□ -1.39
CTNNA1-220ENST00000520260 PHLPP2Q6ZVD8 1323 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 EMSYQ7Z589 1322 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 NRCAMQ92823 1304 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 CYP3A7-CYP3A51PA0A087WV96 503 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 VPS37CA5D8V6 355 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 ARVCFO00192 962 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 MEIS1O00470 390 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 OPLAHO14841 1288 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 SLC26A4O43511 780 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 GAS2O43903 313 aaKnown RBP6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 EFCAB14O75071 495 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 ADAMTS4O75173 837 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 PRPF40AO75400 957 aaKnown RBP6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 PGK1P00558 417 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 IGHA2P01877 340 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 MMP3P08254 477 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 ACTN1P12814 892 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 ZSCAN20P17040 1043 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 EN2P19622 333 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 MUTP22033 750 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 CYP3A7P24462 503 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 RFC2P35250 354 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 ITGA7Q13683 1181 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 PRAMEF19Q5SWL8 479 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 MYSM1Q5VVJ2 828 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 TAF2Q6P1X5 1199 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 CYFIP1Q7L576 1253 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 PLPPR4Q7Z2D5 763 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 RPUSD2Q8IZ73 545 aaKnown RBP6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 CAGE1Q8TC20 777 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 RNF25Q96BH1 459 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 CDK5RAP3Q96JB5 506 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 TSPY26PQ9H489 355 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 SPTLC3Q9NUV7 552 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 RTEL1Q9NZ71 1219 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 TMEM63CQ9P1W3 806 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 CFAP45Q9UL16 551 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 PCDHA12Q9UN75 941 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 ATP11BQ9Y2G3 1177 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 PCDHA10Q9Y5I2 948 aa6.33□□□□□ -1.4
CTNNA1-220ENST00000520260 COL1A2P08123 1366 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 KDM3AQ9Y4C1 1321 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 C17orf102A2RUQ5 167 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 H3BRB1 525 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 MAGEB2O15479 319 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 LETM1O95202 739 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 BRD1O95696 1058 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 F2P00734 622 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 TPM3P06753 285 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 CLTBP09497 229 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 RAG1P15918 1043 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 ABCD1P33897 745 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 TCF7P36402 384 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 STAT5BP51692 787 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 PTPN5P54829 565 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 CHMP4BP1P59074 171 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 PURAQ00577 322 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 ARHGAP1Q07960 439 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 NCBP1Q09161 790 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 TRIM32Q13049 653 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 PPIGQ13427 754 aaKnown RBP eCLIP6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 PDAP1Q13442 181 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 CUL4AQ13619 759 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 MFSD10Q14728 455 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 SF3A1Q15459 793 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 LY6KQ17RY6 165 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 INF2Q27J81 1249 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 TTC38Q5R3I4 469 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 KRT79Q5XKE5 535 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 PDXDC2PQ6P474 469 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 CCDC62Q6P9F0 684 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 SLC39A5Q6ZMH5 540 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 ANKRD33Q7Z3H0 272 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 MIER3Q7Z3K6 550 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 APBB1IPQ7Z5R6 666 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 SESTD1Q86VW0 696 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 KLHDC9Q8NEP7 349 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 TRPV1Q8NER1 839 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms