RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 CLPPQ16740 277 aaPredicted RBP12.4□□□□□ -0.42
SPIDR-211ENST00000519401 TCP11X2Q5H9J9 407 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 OTUD7BQ6GQQ9 843 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 CROCCP2Q86T23 111 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 ZNF554Q86TJ5 538 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 VPS37DQ86XT2 251 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 ATP11CQ8NB49 1132 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 PIGOQ8TEQ8 1089 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 SNRNP27Q8WVK2 155 aaKnown RBP12.4□□□□□ -0.42
SPIDR-211ENST00000519401 MAGOHBQ96A72 148 aaKnown RBP12.4□□□□□ -0.42
SPIDR-211ENST00000519401 ZNF496Q96IT1 587 aaPredicted RBP12.4□□□□□ -0.42
SPIDR-211ENST00000519401 HIC2Q96JB3 615 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 TMEM237Q96Q45 408 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 NR1H4Q96RI1 486 aaPredicted RBP12.4□□□□□ -0.42
SPIDR-211ENST00000519401 SGIP1Q9BQI5 828 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 OXCT2Q9BYC2 517 aaPredicted RBP12.4□□□□□ -0.42
SPIDR-211ENST00000519401 RXFP1Q9HBX9 757 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 ABCF3Q9NUQ8 709 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 SERTAD1Q9UHV2 236 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 RWDD2AQ9UIY3 292 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 USP15Q9Y4E8 981 aaPredicted RBP12.4□□□□□ -0.42
SPIDR-211ENST00000519401 UTYO14607 1347 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 UBR3Q6ZT12 1888 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 MYH7BA7E2Y1 1941 aa12.4□□□□□ -0.42
SPIDR-211ENST00000519401 WDR46O15213 610 aaKnown RBP12.39□□□□□ -0.43
SPIDR-211ENST00000519401 SART1O43290 800 aaKnown RBP12.39□□□□□ -0.43
SPIDR-211ENST00000519401 SUN1O94901 812 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 CHGBP05060 677 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 SMARCA1P28370 1054 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 MATR3P43243 847 aaKnown RBP eCLIP12.39□□□□□ -0.432e-6■■■■■ 28.1
SPIDR-211ENST00000519401 MMP13P45452 471 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 CRKLP46109 303 aaKnown RBP12.39□□□□□ -0.43
SPIDR-211ENST00000519401 OXCT1P55809 520 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 USP46P62068 366 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 TNNC1P63316 161 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 MCL1Q07820 350 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 MAP7Q14244 749 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 CNPY1Q3B7I2 92 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 DAB2IPQ5VWQ8 1189 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 TBC1D9BQ66K14 1250 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 PI16Q6UXB8 463 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 HOOK3Q86VS8 718 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 TTC5Q8N0Z6 440 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 AGGF1Q8N302 714 aaeCLIP12.39□□□□□ -0.432e-6■■□□□ 12.5
SPIDR-211ENST00000519401 ZNF333Q96JL9 665 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 CATSPER2Q96P56 530 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 MTA3Q9BTC8 594 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 SYNPO2Q9UMS6 1093 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 CES2O00748 559 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 POLR2DO15514 142 aaKnown RBP12.39□□□□□ -0.43
SPIDR-211ENST00000519401 TJP3O95049 919 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 LCA5LO95447 670 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 GJB6O95452 261 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 MMEP08473 750 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 TROVE2P10155 538 aaKnown RBP eCLIP12.39□□□□□ -0.43
SPIDR-211ENST00000519401 MYBL1P10243 752 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 HMGB2P26583 209 aaKnown RBP12.39□□□□□ -0.43
SPIDR-211ENST00000519401 CDC25AP30304 524 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 CD97P48960 835 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 CACNA2D1P54289 1103 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 SPA17Q15506 151 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 TMEM132AQ24JP5 1023 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 RC3H1Q5TC82 1133 aaKnown RBP12.39□□□□□ -0.43
SPIDR-211ENST00000519401 KLC3Q6P597 504 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 SEPT14Q6ZU15 432 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 SH3RF1Q7Z6J0 888 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 MYOCDQ8IZQ8 938 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 KCNV2Q8TDN2 545 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 SPIRE2Q8WWL2 714 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 GATA6Q92908 595 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 OLFM3Q96PB7 478 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 HINFPQ9BQA5 517 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 NHEJ1Q9H9Q4 299 aaPredicted RBP12.39□□□□□ -0.43
SPIDR-211ENST00000519401 TBCCD1Q9NVR7 557 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 DBF4Q9UBU7 674 aaPredicted RBP12.39□□□□□ -0.43
SPIDR-211ENST00000519401 WDR19Q8NEZ3 1342 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 ZNF609O15014 1411 aa12.39□□□□□ -0.43
SPIDR-211ENST00000519401 A8MUI8 341 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 SMAPO00193 183 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 CETN3O15182 167 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 PJA2O43164 708 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 ECE2O60344 883 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 ANXA1P04083 346 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 CD44P16070 742 aaKnown RBP12.38□□□□□ -0.43
SPIDR-211ENST00000519401 NAT1P18440 290 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 CCT6AP40227 531 aaKnown RBP12.38□□□□□ -0.43
SPIDR-211ENST00000519401 PKN1Q16512 942 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 INTS5Q6P9B9 1019 aaKnown RBP12.38□□□□□ -0.43
SPIDR-211ENST00000519401 KSR2Q6VAB6 950 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 LRRC34Q8IZ02 419 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 SAMD3Q8N6K7 520 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 MB21D1Q8N884 522 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 PHC3Q8NDX5 983 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 SLC16A10Q8TF71 515 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 LENG1Q96BZ8 264 aaPredicted RBP12.38□□□□□ -0.43
SPIDR-211ENST00000519401 PGM2Q96G03 612 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 NAP1L3Q99457 506 aaPredicted RBP12.38□□□□□ -0.43
SPIDR-211ENST00000519401 TXLNGQ9NUQ3 528 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 STOML1Q9UBI4 398 aa12.38□□□□□ -0.43
SPIDR-211ENST00000519401 PA2G4Q9UQ80 394 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms