RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 FERMT3Q86UX7 667 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 SLC43A3Q8NBI5 491 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 TBCKQ8TEA7 893 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 TOX2Q96NM4 488 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 GPR20Q99678 358 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 LBHD1Q9BQE6 289 aaPredicted RBP8.57□□□□□ -1.04
SDCBP-206ENST00000519115 SENP7Q9BQF6 1050 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 PPP1R12CQ9BZL4 782 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 AGO4Q9HCK5 861 aaKnown RBP8.57□□□□□ -1.04
SDCBP-206ENST00000519115 TRMT13Q9NUP7 481 aaKnown RBP8.57□□□□□ -1.04
SDCBP-206ENST00000519115 TBX21Q9UL17 535 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 COLQQ9Y215 455 aaPredicted RBP8.57□□□□□ -1.04
SDCBP-206ENST00000519115 EVPLQ92817 2033 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 TET1Q8NFU7 2136 aa8.57□□□□□ -1.04
SDCBP-206ENST00000519115 LOXHD1Q8IVV2 1947 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 CCDC194A0A1B0GVG4 234 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 KIAA0355O15063 1070 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 SPTLC2O15270 562 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 EDIL3O43854 480 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 PPFIA4O75335 1185 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 TDP2O95551 362 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 CD4P01730 458 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 CYP2C9P11712 490 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 RAG1P15918 1043 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 CMA1P23946 247 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 TCF7P36402 384 aaPredicted RBP8.56□□□□□ -1.04
SDCBP-206ENST00000519115 PRPHP41219 470 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 NR5A1Q13285 461 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 ITGB3BPQ13352 177 aaPredicted RBP8.56□□□□□ -1.04
SDCBP-206ENST00000519115 NONOQ15233 471 aaKnown RBP eCLIP8.56□□□□□ -1.04
SDCBP-206ENST00000519115 EARS2Q5JPH6 523 aaKnown RBP8.56□□□□□ -1.04
SDCBP-206ENST00000519115 PPP4R3AQ6IN85 833 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 NFRKBQ6P4R8 1299 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 MOXD1Q6UVY6 613 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 PIK3AP1Q6ZUJ8 805 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 NIPA1Q7RTP0 329 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 GIMAP8Q8ND71 665 aaPredicted RBP8.56□□□□□ -1.04
SDCBP-206ENST00000519115 BADQ92934 168 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 LENG9Q96B70 501 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 GDF15Q99988 308 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 SDF4Q9BRK5 362 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 PYM1Q9BRP8 204 aaKnown RBP8.56□□□□□ -1.04
SDCBP-206ENST00000519115 C16orf70Q9BSU1 422 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 KATNAL1Q9BW62 490 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 JPH1Q9HDC5 661 aaPredicted RBP8.56□□□□□ -1.04
SDCBP-206ENST00000519115 HDAC6Q9UBN7 1215 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 SLC9A2Q9UBY0 812 aa8.56□□□□□ -1.04
SDCBP-206ENST00000519115 RANBP2P49792 3224 aaKnown RBP8.56□□□□□ -1.04
SDCBP-206ENST00000519115 NFASCO94856 1347 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 UMODL1Q5DID0 1318 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 SIP14410 1827 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 CYP3A7-CYP3A51PA0A087WV96 503 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 GSTTP1A0A1W2PQM5 241 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 H3BRB1 525 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 HAS3O00219 553 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 IPO5O00410 1097 aaKnown RBP8.55□□□□□ -1.04
SDCBP-206ENST00000519115 MAFGO15525 162 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 SLC26A4O43511 780 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 CUTAO60888 179 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 GCFC2P16383 781 aaKnown RBP8.55□□□□□ -1.04
SDCBP-206ENST00000519115 CYP3A7P24462 503 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 MARK3P27448 753 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 CIITAP33076 1130 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 CYP2C18P33260 490 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 ACTR2P61160 394 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 SETQ01105 290 aaPredicted RBP8.55□□□□□ -1.04
SDCBP-206ENST00000519115 PTPAQ15257 358 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 GDF6Q6KF10 455 aaPredicted RBP8.55□□□□□ -1.04
SDCBP-206ENST00000519115 KCTD17Q8N5Z5 321 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 C7orf31Q8N865 590 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 GJA10Q969M2 543 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 TIGD1Q96MW7 591 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 USP28Q96RU2 1077 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 ZNF577Q9BSK1 485 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 UBE2OQ9C0C9 1292 aaKnown RBP8.55□□□□□ -1.04
SDCBP-206ENST00000519115 TSPYL2Q9H2G4 693 aaPredicted RBP8.55□□□□□ -1.04
SDCBP-206ENST00000519115 HIPK3Q9H422 1215 aa8.55□□□□□ -1.04
SDCBP-206ENST00000519115 TUT1Q9H6E5 874 aaKnown RBP8.55□□□□□ -1.04
SDCBP-206ENST00000519115 DDX19AQ9NUU7 478 aaKnown RBP8.55□□□□□ -1.04
SDCBP-206ENST00000519115 SRPRBQ9Y5M8 271 aaKnown RBP8.55□□□□□ -1.04
SDCBP-206ENST00000519115 GBF1Q92538 1859 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 KIF28PB7ZC32 967 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 RBAK-RBAKDNI3L0D1 243 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 MSH4O15457 936 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 DHX15O43143 795 aaKnown RBP8.54□□□□□ -1.04
SDCBP-206ENST00000519115 SLC37A4O43826 429 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 CAVIN2O95810 425 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 CCNE2O96020 404 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 SMIM10L2AP0DMW4 78 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 SMIM10L2BP0DMW5 78 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 TOB1P50616 345 aaPredicted RBP8.54□□□□□ -1.04
SDCBP-206ENST00000519115 ZNF200P98182 395 aaPredicted RBP8.54□□□□□ -1.04
SDCBP-206ENST00000519115 HIC1Q14526 733 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 STK38Q15208 465 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 SF3A1Q15459 793 aaKnown RBP8.54□□□□□ -1.04
SDCBP-206ENST00000519115 PTGISQ16647 500 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 LETM2Q2VYF4 491 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 NEK8Q86SG6 692 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 SEPT1Q8WYJ6 367 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 GLG1Q92896 1179 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms