RNA–Protein interactions for RNA: ENST00000518872.1

SYNPO-203, Transcript of synaptopodin, humanhuman

TSL 5

Gene SYNPO, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-203ENST00000518872 LARP6Q9BRS8 491 aaKnown RBP33.76■■■□□ 2.99
SYNPO-203ENST00000518872 MYH9P35579 1960 aaKnown RBP33.75■■■□□ 2.99
SYNPO-203ENST00000518872 IPO5O00410 1097 aaKnown RBP33.75■■■□□ 2.99
SYNPO-203ENST00000518872 RPLP2P05387 115 aaKnown RBP33.75■■■□□ 2.99
SYNPO-203ENST00000518872 MARK3P27448 753 aa33.75■■■□□ 2.99
SYNPO-203ENST00000518872 TCTN1Q2MV58 587 aa33.75■■■□□ 2.99
SYNPO-203ENST00000518872 PLEKHG4Q58EX7 1191 aa33.75■■■□□ 2.99
SYNPO-203ENST00000518872 RASGRP4Q8TDF6 673 aa33.75■■■□□ 2.99
SYNPO-203ENST00000518872 C22orf23Q9BZE7 217 aa33.75■■■□□ 2.99
SYNPO-203ENST00000518872 RRN3P2A6NIE6 340 aa33.74■■■□□ 2.99
SYNPO-203ENST00000518872 KIF28PB7ZC32 967 aa33.74■■■□□ 2.99
SYNPO-203ENST00000518872 MYOGP15173 224 aa33.74■■■□□ 2.99
SYNPO-203ENST00000518872 STAT5BP51692 787 aa33.74■■■□□ 2.99
SYNPO-203ENST00000518872 NLRP5P59047 1200 aa33.74■■■□□ 2.99
SYNPO-203ENST00000518872 ANKRD1Q15327 319 aa33.74■■■□□ 2.99
SYNPO-203ENST00000518872 PPP2R2DQ66LE6 453 aa33.74■■■□□ 2.99
SYNPO-203ENST00000518872 DAGLBQ8NCG7 672 aa33.74■■■□□ 2.99
SYNPO-203ENST00000518872 TBC1D22BQ9NU19 505 aa33.74■■■□□ 2.99
SYNPO-203ENST00000518872 TUBE1Q9UJT0 475 aa33.74■■■□□ 2.99
SYNPO-203ENST00000518872 PCDHA4Q9UN74 947 aa33.74■■■□□ 2.99
SYNPO-203ENST00000518872 WDR81Q562E7 1941 aa33.74■■■□□ 2.99
SYNPO-203ENST00000518872 SIP14410 1827 aa33.74■■■□□ 2.99
SYNPO-203ENST00000518872 PFKFB2O60825 505 aa33.73■■■□□ 2.99
SYNPO-203ENST00000518872 CDKL5O76039 1030 aa33.73■■■□□ 2.99
SYNPO-203ENST00000518872 CCNE2O96020 404 aa33.73■■■□□ 2.99
SYNPO-203ENST00000518872 USP11P51784 963 aa33.73■■■□□ 2.99
SYNPO-203ENST00000518872 SCRN1Q12765 414 aa33.73■■■□□ 2.99
SYNPO-203ENST00000518872 STK3Q13188 491 aa33.73■■■□□ 2.99
SYNPO-203ENST00000518872 MARCH8Q5T0T0 291 aa33.73■■■□□ 2.99
SYNPO-203ENST00000518872 GALNT17Q6IS24 598 aa33.73■■■□□ 2.99
SYNPO-203ENST00000518872 ABHD15Q6UXT9 468 aa33.73■■■□□ 2.99
SYNPO-203ENST00000518872 DBF4BQ8NFT6 615 aa33.73■■■□□ 2.99
SYNPO-203ENST00000518872 EYSQ5T1H1 3165 aa33.73■■■□□ 2.99
SYNPO-203ENST00000518872 LENG9Q96B70 501 aa33.72■■■□□ 2.99
SYNPO-203ENST00000518872 GAS2L1Q99501 681 aaPredicted RBP33.72■■■□□ 2.99
SYNPO-203ENST00000518872 ZNF577Q9BSK1 485 aa33.72■■■□□ 2.99
SYNPO-203ENST00000518872 SLKQ9H2G2 1235 aaPredicted RBP33.72■■■□□ 2.99
SYNPO-203ENST00000518872 PRDM12Q9H4Q4 367 aa33.72■■■□□ 2.99
SYNPO-203ENST00000518872 TPCN1Q9ULQ1 816 aa33.72■■■□□ 2.99
SYNPO-203ENST00000518872 STK36Q9NRP7 1315 aa33.72■■■□□ 2.99
SYNPO-203ENST00000518872 M0R2N6 131 aa33.71■■■□□ 2.99
SYNPO-203ENST00000518872 EDIL3O43854 480 aa33.71■■■□□ 2.99
SYNPO-203ENST00000518872 CA3P07451 260 aa33.71■■■□□ 2.99
SYNPO-203ENST00000518872 INSRRP14616 1297 aa33.71■■■□□ 2.99
SYNPO-203ENST00000518872 DEFB103AP81534 67 aa33.71■■■□□ 2.99
SYNPO-203ENST00000518872 PLCB4Q15147 1175 aa33.71■■■□□ 2.99
SYNPO-203ENST00000518872 CTSHP09668 335 aa33.7■■■□□ 2.99
SYNPO-203ENST00000518872 NPY5RQ15761 445 aa33.7■■■□□ 2.99
SYNPO-203ENST00000518872 ZNF746Q6NUN9 644 aaPredicted RBP33.7■■■□□ 2.99
SYNPO-203ENST00000518872 RUFY4Q6ZNE9 571 aa33.7■■■□□ 2.99
SYNPO-203ENST00000518872 RSPH3Q86UC2 560 aa33.7■■■□□ 2.99
SYNPO-203ENST00000518872 GJB5O95377 273 aa33.69■■■□□ 2.98
SYNPO-203ENST00000518872 PRR16Q569H4 304 aa33.69■■■□□ 2.98
SYNPO-203ENST00000518872 FAM160B1Q5W0V3 765 aa33.69■■■□□ 2.98
SYNPO-203ENST00000518872 SEPT8Q92599 483 aa33.69■■■□□ 2.98
SYNPO-203ENST00000518872 APBB2Q92870 758 aa33.69■■■□□ 2.98
SYNPO-203ENST00000518872 TRPC6Q9Y210 931 aa33.69■■■□□ 2.98
SYNPO-203ENST00000518872 A0A0C4DFX4 3053 aa33.68■■■□□ 2.98
SYNPO-203ENST00000518872 AK2P54819 239 aa33.68■■■□□ 2.98
SYNPO-203ENST00000518872 MGAT3Q09327 533 aa33.68■■■□□ 2.98
SYNPO-203ENST00000518872 MIS18BP1Q6P0N0 1132 aa33.68■■■□□ 2.98
SYNPO-203ENST00000518872 SMAP1Q8IYB5 467 aaPredicted RBP33.68■■■□□ 2.98
SYNPO-203ENST00000518872 BLIDQ8IZY5 108 aa33.68■■■□□ 2.98
SYNPO-203ENST00000518872 PRUNE2Q8WUY3 3088 aa33.68■■■□□ 2.98
SYNPO-203ENST00000518872 UNC80Q8N2C7 3258 aa33.67■■■□□ 2.98
SYNPO-203ENST00000518872 POTEB3A0JP26 581 aa33.67■■■□□ 2.98
SYNPO-203ENST00000518872 DDX39AO00148 427 aaKnown RBP33.67■■■□□ 2.98
SYNPO-203ENST00000518872 TLL1O43897 1013 aa33.67■■■□□ 2.98
SYNPO-203ENST00000518872 CHRNA1P02708 482 aa33.67■■■□□ 2.98
SYNPO-203ENST00000518872 KRT76Q01546 638 aa33.67■■■□□ 2.98
SYNPO-203ENST00000518872 POTEBQ6S5H4 581 aa33.67■■■□□ 2.98
SYNPO-203ENST00000518872 CCDC60Q8IWA6 550 aaPredicted RBP33.67■■■□□ 2.98
SYNPO-203ENST00000518872 TRANK1O15050 2925 aa33.67■■■□□ 2.98
SYNPO-203ENST00000518872 TAP1Q03518 808 aa33.66■■■□□ 2.98
SYNPO-203ENST00000518872 ADGRE1Q14246 886 aa33.66■■■□□ 2.98
SYNPO-203ENST00000518872 TBCKQ8TEA7 893 aa33.66■■■□□ 2.98
SYNPO-203ENST00000518872 ATP8B4Q8TF62 1192 aa33.66■■■□□ 2.98
SYNPO-203ENST00000518872 AIFM3Q96NN9 605 aa33.66■■■□□ 2.98
SYNPO-203ENST00000518872 OSBPL7Q9BZF2 842 aa33.66■■■□□ 2.98
SYNPO-203ENST00000518872 PCDHA2Q9Y5H9 948 aa33.66■■■□□ 2.98
SYNPO-203ENST00000518872 COL1A2P08123 1366 aa33.65■■■□□ 2.98
SYNPO-203ENST00000518872 HBP1O60381 514 aa33.65■■■□□ 2.98
SYNPO-203ENST00000518872 MOXD1Q6UVY6 613 aa33.65■■■□□ 2.98
SYNPO-203ENST00000518872 PHF6Q8IWS0 365 aaKnown RBP eCLIP33.65■■■□□ 2.98
SYNPO-203ENST00000518872 DNAJB3Q8WWF6 145 aa33.65■■■□□ 2.98
SYNPO-203ENST00000518872 RAD9AQ99638 391 aa33.65■■■□□ 2.98
SYNPO-203ENST00000518872 ZNF302Q9NR11 478 aa33.65■■■□□ 2.98
SYNPO-203ENST00000518872 CYP3A7-CYP3A51PA0A087WV96 503 aa33.64■■■□□ 2.98
SYNPO-203ENST00000518872 BACH1O14867 736 aa33.64■■■□□ 2.98
SYNPO-203ENST00000518872 CYP3A7P24462 503 aa33.64■■■□□ 2.98
SYNPO-203ENST00000518872 IGBP1P78318 339 aa33.64■■■□□ 2.98
SYNPO-203ENST00000518872 RIT2Q99578 217 aa33.64■■■□□ 2.98
SYNPO-203ENST00000518872 TCEAL9Q9UHQ7 104 aa33.64■■■□□ 2.98
SYNPO-203ENST00000518872 MAFBQ9Y5Q3 323 aaPredicted RBP33.64■■■□□ 2.98
SYNPO-203ENST00000518872 LOXHD1Q8IVV2 1947 aa33.63■■■□□ 2.97
SYNPO-203ENST00000518872 AMHP03971 560 aa33.63■■■□□ 2.97
SYNPO-203ENST00000518872 Q4G0T1 1027 aa33.63■■■□□ 2.97
SYNPO-203ENST00000518872 LIN28BQ6ZN17 250 aaKnown RBP eCLIP33.63■■■□□ 2.97
SYNPO-203ENST00000518872 ZBED2Q9BTP6 218 aa33.63■■■□□ 2.97
SYNPO-203ENST00000518872 PHF20Q9BVI0 1012 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms