RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 CALM3P0DP25 149 aa7.96□□□□□ -1.14
CPS1-210ENST00000518043 VEGFAP15692 232 aaPredicted RBP7.96□□□□□ -1.14
CPS1-210ENST00000518043 ZNF543Q08ER8 600 aa7.96□□□□□ -1.14
CPS1-210ENST00000518043 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.96□□□□□ -1.14
CPS1-210ENST00000518043 MOB2Q70IA6 237 aa7.96□□□□□ -1.14
CPS1-210ENST00000518043 CDC37L1Q7L3B6 337 aa7.96□□□□□ -1.14
CPS1-210ENST00000518043 KRT26Q7Z3Y9 468 aa7.96□□□□□ -1.14
CPS1-210ENST00000518043 USP48Q86UV5 1035 aa7.96□□□□□ -1.14
CPS1-210ENST00000518043 GMCL1P1Q8NEA9 526 aa7.96□□□□□ -1.14
CPS1-210ENST00000518043 JPH1Q9HDC5 661 aaPredicted RBP7.96□□□□□ -1.14
CPS1-210ENST00000518043 GJB4Q9NTQ9 266 aa7.96□□□□□ -1.14
CPS1-210ENST00000518043 NAP1L2Q9ULW6 460 aaPredicted RBP7.96□□□□□ -1.14
CPS1-210ENST00000518043 SYNPO2Q9UMS6 1093 aa7.96□□□□□ -1.14
CPS1-210ENST00000518043 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.96□□□□□ -1.14
CPS1-210ENST00000518043 SNCAIPQ9Y6H5 919 aa7.96□□□□□ -1.14
CPS1-210ENST00000518043 A0A0G2JMZ2 1700 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 TRAF5O00463 557 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 ADAMTS3O15072 1205 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 CTNND1O60716 968 aaKnown RBP7.95□□□□□ -1.14
CPS1-210ENST00000518043 SMNDC1O75940 238 aaKnown RBP eCLIP7.95□□□□□ -1.14
CPS1-210ENST00000518043 TAGLNQ01995 201 aaKnown RBP7.95□□□□□ -1.14
CPS1-210ENST00000518043 PPP2R5BQ15173 497 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 NPY5RQ15761 445 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 MAP3K11Q16584 847 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.95□□□□□ -1.14
CPS1-210ENST00000518043 KIAA0319Q5VV43 1072 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 CEP135Q66GS9 1140 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 DCAF15Q66K64 600 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 MAP1SQ66K74 1059 aaPredicted RBP7.95□□□□□ -1.14
CPS1-210ENST00000518043 OTUD7BQ6GQQ9 843 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 TTBK2Q6IQ55 1244 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 C8orf86Q6ZUL3 223 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 PNMA8AQ86V59 439 aaPredicted RBP7.95□□□□□ -1.14
CPS1-210ENST00000518043 SCYL3Q8IZE3 742 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 GIPC2Q8TF65 315 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 FOXD4L4Q8WXT5 416 aaPredicted RBP7.95□□□□□ -1.14
CPS1-210ENST00000518043 TTC9Q92623 222 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 ZKSCAN4Q969J2 545 aaPredicted RBP7.95□□□□□ -1.14
CPS1-210ENST00000518043 DCPSQ96C86 337 aaKnown RBP7.95□□□□□ -1.14
CPS1-210ENST00000518043 CHMP4CQ96CF2 233 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 RRAGCQ9HB90 399 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 RBM28Q9NW13 759 aaKnown RBP7.95□□□□□ -1.14
CPS1-210ENST00000518043 ORC3Q9UBD5 711 aaPredicted RBP7.95□□□□□ -1.14
CPS1-210ENST00000518043 TMX2Q9Y320 296 aa7.95□□□□□ -1.14
CPS1-210ENST00000518043 FRMPD2Q68DX3 1309 aaPredicted RBP7.95□□□□□ -1.14
CPS1-210ENST00000518043 COL11A1P12107 1806 aaPredicted RBP7.94□□□□□ -1.14
CPS1-210ENST00000518043 hCG_1642624A0A1W2PR95 340 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 PRPF3O43395 683 aaKnown RBP7.94□□□□□ -1.14
CPS1-210ENST00000518043 STX6O43752 255 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 PPP1R11O60927 126 aaPredicted RBP7.94□□□□□ -1.14
CPS1-210ENST00000518043 LILRB5O75023 590 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 GADD45BO75293 160 aaPredicted RBP7.94□□□□□ -1.14
CPS1-210ENST00000518043 HSP90AA1P07900 732 aaKnown RBP7.94□□□□□ -1.14
CPS1-210ENST00000518043 ASNSP08243 561 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 HOXB4P17483 251 aaPredicted RBP7.94□□□□□ -1.14
CPS1-210ENST00000518043 PTPRAP18433 802 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 DGKGP49619 791 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 HMGN5P82970 282 aaKnown RBP7.94□□□□□ -1.14
CPS1-210ENST00000518043 RESTQ13127 1097 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 VGLL4Q14135 290 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 SLFN13Q68D06 897 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 SYNE3Q6ZMZ3 975 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 CLEC17AQ6ZS10 378 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 CTCFLQ8NI51 663 aaPredicted RBP7.94□□□□□ -1.14
CPS1-210ENST00000518043 DCAF4Q8WV16 495 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 TNPO1Q92973 898 aaKnown RBP7.94□□□□□ -1.14
CPS1-210ENST00000518043 MTMR8Q96EF0 704 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 CLMNQ96JQ2 1002 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 HHIPQ96QV1 700 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 WRNIP1Q96S55 665 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 NUP88Q99567 741 aaPredicted RBP7.94□□□□□ -1.14
CPS1-210ENST00000518043 DUSP9Q99956 384 aaKnown RBP7.94□□□□□ -1.14
CPS1-210ENST00000518043 WDR18Q9BV38 432 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 SPZ1Q9BXG8 430 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 SLC26A6Q9BXS9 759 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 RNF26Q9BY78 433 aaPredicted RBP7.94□□□□□ -1.14
CPS1-210ENST00000518043 RIOX1Q9H6W3 641 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 GINM1Q9NU53 330 aa7.94□□□□□ -1.14
CPS1-210ENST00000518043 CCDC196A0A1B0GTZ2 297 aa7.93□□□□□ -1.14
CPS1-210ENST00000518043 KIF28PB7ZC32 967 aa7.93□□□□□ -1.14
CPS1-210ENST00000518043 KLRF2D3W0D1 207 aa7.93□□□□□ -1.14
CPS1-210ENST00000518043 F5H6K3 240 aa7.93□□□□□ -1.14
CPS1-210ENST00000518043 PDE2AO00408 941 aaPredicted RBP7.93□□□□□ -1.14
CPS1-210ENST00000518043 CPLX1O14810 134 aa7.93□□□□□ -1.14
CPS1-210ENST00000518043 DHX16O60231 1041 aaKnown RBP7.93□□□□□ -1.14
CPS1-210ENST00000518043 CDKL5O76039 1030 aa7.93□□□□□ -1.14
CPS1-210ENST00000518043 F13A1P00488 732 aa7.93□□□□□ -1.14
CPS1-210ENST00000518043 PARP1P09874 1014 aaKnown RBP7.93□□□□□ -1.14
CPS1-210ENST00000518043 ZSCAN22P10073 491 aaPredicted RBP7.93□□□□□ -1.14
CPS1-210ENST00000518043 SMARCA1P28370 1054 aa7.93□□□□□ -1.14
CPS1-210ENST00000518043 KLRC3Q07444 240 aa7.93□□□□□ -1.14
CPS1-210ENST00000518043 PFKFB3Q16875 520 aaPredicted RBP7.93□□□□□ -1.14
CPS1-210ENST00000518043 SUPT20HL1Q3ZLR7 823 aa7.93□□□□□ -1.14
CPS1-210ENST00000518043 ASPRV1Q53RT3 343 aa7.93□□□□□ -1.14
CPS1-210ENST00000518043 LDLRAD1Q5T700 205 aa7.93□□□□□ -1.14
CPS1-210ENST00000518043 BTNL9Q6UXG8 535 aa7.93□□□□□ -1.14
CPS1-210ENST00000518043 LDHDQ86WU2 507 aa7.93□□□□□ -1.14
CPS1-210ENST00000518043 TMEM102Q8N9M5 508 aaPredicted RBP7.93□□□□□ -1.14
CPS1-210ENST00000518043 HOOK2Q96ED9 719 aa7.93□□□□□ -1.14
CPS1-210ENST00000518043 POP1Q99575 1024 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms