RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 WASF1Q92558 559 aa27.96■■■□□ 2.07
PVT1-204ENST00000517525 TIFAQ96CG3 184 aa27.96■■■□□ 2.07
PVT1-204ENST00000517525 SCN5AQ14524 2016 aa27.96■■■□□ 2.07
PVT1-204ENST00000517525 GRXCR1A8MXD5 290 aa27.95■■■□□ 2.06
PVT1-204ENST00000517525 RSPH10B2B2RC85 870 aa27.95■■■□□ 2.06
PVT1-204ENST00000517525 RPLP2P05387 115 aaKnown RBP27.95■■■□□ 2.06
PVT1-204ENST00000517525 RSPH10BP0C881 870 aa27.95■■■□□ 2.06
PVT1-204ENST00000517525 PRR16Q569H4 304 aa27.95■■■□□ 2.06
PVT1-204ENST00000517525 TBCKQ8TEA7 893 aa27.95■■■□□ 2.06
PVT1-204ENST00000517525 MBOAT7Q96N66 472 aa27.95■■■□□ 2.06
PVT1-204ENST00000517525 SLC9A7Q96T83 725 aa27.95■■■□□ 2.06
PVT1-204ENST00000517525 TET1Q8NFU7 2136 aa27.95■■■□□ 2.06
PVT1-204ENST00000517525 LAMA2P24043 3122 aaKnown RBP27.94■■■□□ 2.06
PVT1-204ENST00000517525 EFCAB14O75071 495 aa27.94■■■□□ 2.06
PVT1-204ENST00000517525 ATP2A2P16615 1042 aaKnown RBP27.94■■■□□ 2.06
PVT1-204ENST00000517525 GRIK4Q16099 956 aa27.94■■■□□ 2.06
PVT1-204ENST00000517525 Q4G0T1 1027 aa27.94■■■□□ 2.06
PVT1-204ENST00000517525 MARCH8Q5T0T0 291 aa27.94■■■□□ 2.06
PVT1-204ENST00000517525 KRT25Q7Z3Z0 450 aa27.94■■■□□ 2.06
PVT1-204ENST00000517525 SMAP1Q8IYB5 467 aaPredicted RBP27.94■■■□□ 2.06
PVT1-204ENST00000517525 ORC3Q9UBD5 711 aaPredicted RBP27.94■■■□□ 2.06
PVT1-204ENST00000517525 MSRAQ9UJ68 235 aa27.94■■■□□ 2.06
PVT1-204ENST00000517525 ABHD14A-ACY1A0A1B0GW23 586 aa27.93■■■□□ 2.06
PVT1-204ENST00000517525 ZBBXA8MT70 800 aa27.93■■■□□ 2.06
PVT1-204ENST00000517525 LARGE1O95461 756 aa27.93■■■□□ 2.06
PVT1-204ENST00000517525 FDPSP14324 419 aaKnown RBP27.93■■■□□ 2.06
PVT1-204ENST00000517525 PBX2P40425 430 aa27.93■■■□□ 2.06
PVT1-204ENST00000517525 KRT76Q01546 638 aa27.93■■■□□ 2.06
PVT1-204ENST00000517525 PLCB4Q15147 1175 aa27.93■■■□□ 2.06
PVT1-204ENST00000517525 RIT2Q99578 217 aa27.93■■■□□ 2.06
PVT1-204ENST00000517525 KIF2CQ99661 725 aa27.93■■■□□ 2.06
PVT1-204ENST00000517525 PCDHA11Q9Y5I1 949 aa27.93■■■□□ 2.06
PVT1-204ENST00000517525 INSRRP14616 1297 aa27.92■■■□□ 2.06
PVT1-204ENST00000517525 MARK3P27448 753 aa27.92■■■□□ 2.06
PVT1-204ENST00000517525 FAM160B1Q5W0V3 765 aa27.92■■■□□ 2.06
PVT1-204ENST00000517525 MIS18BP1Q6P0N0 1132 aa27.92■■■□□ 2.06
PVT1-204ENST00000517525 NECAB1Q8N987 351 aa27.92■■■□□ 2.06
PVT1-204ENST00000517525 SLC5A5Q92911 643 aa27.92■■■□□ 2.06
PVT1-204ENST00000517525 TUBE1Q9UJT0 475 aa27.92■■■□□ 2.06
PVT1-204ENST00000517525 KCNJ14Q9UNX9 436 aa27.92■■■□□ 2.06
PVT1-204ENST00000517525 MSH4O15457 936 aa27.91■■■□□ 2.06
PVT1-204ENST00000517525 RBM25P49756 843 aaKnown RBP27.91■■■□□ 2.06
PVT1-204ENST00000517525 NONOQ15233 471 aaKnown RBP eCLIP27.91■■■□□ 2.069e-7■■■■□ 23.6
PVT1-204ENST00000517525 NSUN7Q8NE18 718 aaKnown RBP27.91■■■□□ 2.06
PVT1-204ENST00000517525 IL27Q8NEV9 243 aa27.91■■■□□ 2.06
PVT1-204ENST00000517525 CDX2Q99626 313 aaPredicted RBP27.91■■■□□ 2.06
PVT1-204ENST00000517525 ZNF576Q9H609 170 aa27.91■■■□□ 2.06
PVT1-204ENST00000517525 LIMCH1Q9UPQ0 1083 aa27.91■■■□□ 2.06
PVT1-204ENST00000517525 MKRN4PQ13434 485 aaPredicted RBP27.9■■■□□ 2.06
PVT1-204ENST00000517525 PLEKHG4Q58EX7 1191 aa27.9■■■□□ 2.06
PVT1-204ENST00000517525 CCDC60Q8IWA6 550 aaPredicted RBP27.9■■■□□ 2.06
PVT1-204ENST00000517525 ATP8B4Q8TF62 1192 aa27.9■■■□□ 2.06
PVT1-204ENST00000517525 PCDHA10Q9Y5I2 948 aa27.9■■■□□ 2.06
PVT1-204ENST00000517525 MAFBQ9Y5Q3 323 aaPredicted RBP27.9■■■□□ 2.06
PVT1-204ENST00000517525 POTEB3A0JP26 581 aa27.89■■■□□ 2.06
PVT1-204ENST00000517525 DDX39AO00148 427 aaKnown RBP27.89■■■□□ 2.06
PVT1-204ENST00000517525 HBP1O60381 514 aa27.89■■■□□ 2.06
PVT1-204ENST00000517525 WDR5P61964 334 aaKnown RBP27.89■■■□□ 2.06
PVT1-204ENST00000517525 IKBKEQ14164 716 aa27.89■■■□□ 2.06
PVT1-204ENST00000517525 POTEBQ6S5H4 581 aa27.89■■■□□ 2.06
PVT1-204ENST00000517525 RSPH3Q86UC2 560 aa27.89■■■□□ 2.06
PVT1-204ENST00000517525 FAM161BQ96MY7 647 aa27.89■■■□□ 2.06
PVT1-204ENST00000517525 ZNF302Q9NR11 478 aa27.89■■■□□ 2.06
PVT1-204ENST00000517525 YBX2Q9Y2T7 364 aaKnown RBP27.89■■■□□ 2.06
PVT1-204ENST00000517525 TCTN1Q2MV58 587 aa27.88■■■□□ 2.05
PVT1-204ENST00000517525 RUFY4Q6ZNE9 571 aa27.88■■■□□ 2.05
PVT1-204ENST00000517525 HERC6Q8IVU3 1022 aa27.88■■■□□ 2.05
PVT1-204ENST00000517525 KAT6AQ92794 2004 aa27.88■■■□□ 2.05
PVT1-204ENST00000517525 TCEAL9Q9UHQ7 104 aa27.88■■■□□ 2.05
PVT1-204ENST00000517525 TRPC6Q9Y210 931 aa27.88■■■□□ 2.05
PVT1-204ENST00000517525 PCDHA2Q9Y5H9 948 aa27.88■■■□□ 2.05
PVT1-204ENST00000517525 COL1A2P08123 1366 aa27.87■■■□□ 2.05
PVT1-204ENST00000517525 WDR64B1ANS9 1081 aa27.87■■■□□ 2.05
PVT1-204ENST00000517525 BACH1O14867 736 aa27.87■■■□□ 2.05
PVT1-204ENST00000517525 PSAPP07602 524 aa27.87■■■□□ 2.05
PVT1-204ENST00000517525 KCNJ6P48051 423 aa27.87■■■□□ 2.05
PVT1-204ENST00000517525 MGAT3Q09327 533 aa27.87■■■□□ 2.05
PVT1-204ENST00000517525 ST3GAL1Q11201 340 aa27.87■■■□□ 2.05
PVT1-204ENST00000517525 PPP4R3AQ6IN85 833 aa27.87■■■□□ 2.05
PVT1-204ENST00000517525 SWSAP1Q6NVH7 229 aa27.87■■■□□ 2.05
PVT1-204ENST00000517525 PDXDC2PQ6P474 469 aa27.87■■■□□ 2.05
PVT1-204ENST00000517525 B3GNT9Q6UX72 402 aa27.87■■■□□ 2.05
PVT1-204ENST00000517525 DBF4BQ8NFT6 615 aa27.87■■■□□ 2.05
PVT1-204ENST00000517525 RDM1Q8NG50 284 aa27.87■■■□□ 2.05
PVT1-204ENST00000517525 CCDC194A0A1B0GVG4 234 aa27.86■■■□□ 2.05
PVT1-204ENST00000517525 PSMD10O75832 226 aa27.86■■■□□ 2.05
PVT1-204ENST00000517525 CHRNA1P02708 482 aa27.86■■■□□ 2.05
PVT1-204ENST00000517525 ATP4AP20648 1035 aa27.86■■■□□ 2.05
PVT1-204ENST00000517525 SFNP31947 248 aa27.86■■■□□ 2.05
PVT1-204ENST00000517525 ZNF484Q5JVG2 852 aa27.86■■■□□ 2.05
PVT1-204ENST00000517525 ZSCAN31Q96LW9 406 aaPredicted RBP27.86■■■□□ 2.05
PVT1-204ENST00000517525 GJB4Q9NTQ9 266 aa27.86■■■□□ 2.05
PVT1-204ENST00000517525 SMIM35A0A1B0GVV1 85 aa27.85■■■□□ 2.05
PVT1-204ENST00000517525 GAS7O60861 476 aa27.85■■■□□ 2.05
PVT1-204ENST00000517525 TDP2O95551 362 aa27.85■■■□□ 2.05
PVT1-204ENST00000517525 GCFC2P16383 781 aaKnown RBP27.85■■■□□ 2.05
PVT1-204ENST00000517525 RABGGTBP53611 331 aa27.85■■■□□ 2.05
PVT1-204ENST00000517525 GRIN2CQ14957 1233 aa27.85■■■□□ 2.05
PVT1-204ENST00000517525 INF2Q27J81 1249 aa27.85■■■□□ 2.05
PVT1-204ENST00000517525 NME8Q8N427 588 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms