RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 SEPT8Q92599 483 aa9.54□□□□□ -0.88
SCARNA20.3-201ENST00000516913 CLP1Q92989 425 aaKnown RBP9.54□□□□□ -0.88
SCARNA20.3-201ENST00000516913 C1QTNF1Q9BXJ1 281 aa9.54□□□□□ -0.88
SCARNA20.3-201ENST00000516913 IFIH1Q9BYX4 1025 aaKnown RBP9.54□□□□□ -0.88
SCARNA20.3-201ENST00000516913 ALG13Q9NP73 1137 aaKnown RBP9.54□□□□□ -0.88
SCARNA20.3-201ENST00000516913 TMEM260Q9NX78 707 aa9.54□□□□□ -0.88
SCARNA20.3-201ENST00000516913 EMSYQ7Z589 1322 aa9.54□□□□□ -0.88
SCARNA20.3-201ENST00000516913 TTC3P53804 2025 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 SPTBN4Q9H254 2564 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 C5orf67F2Z3F1 127 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 DHX15O43143 795 aaKnown RBP9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 EFCAB14O75071 495 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 CSPG5O95196 566 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 BMPR1AP36894 532 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 EXOSC10Q01780 885 aaKnown RBP9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 PLCB4Q15147 1175 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 ADCK5Q3MIX3 580 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 CREB3L3Q68CJ9 461 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 CATIPQ7Z7H3 387 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 VN1R2Q8NFZ6 395 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 TMEM40Q8WWA1 233 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 CRYGNQ8WXF5 182 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 MAP3K14Q99558 947 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 CLEC1BQ9P126 229 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 PCDHA6Q9UN73 950 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 PCDHA8Q9Y5H6 950 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 CDY2AQ9Y6F7 541 aa9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 MRPL42Q9Y6G3 142 aaKnown RBP9.53□□□□□ -0.88
SCARNA20.3-201ENST00000516913 FRYLO94915 3013 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 NOP56O00567 594 aaKnown RBP9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 DGKIO75912 1065 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 DDAH1O94760 285 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 GLP2RO95838 553 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 ITGB1P05556 798 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 CPA1P15085 419 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 SMARCA1P28370 1054 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 CDC27P30260 824 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 IGBP1P78318 339 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 PPFIA1Q13136 1202 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 TMEM266Q2M3C6 531 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 FANCBQ8NB91 859 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 IL27Q8NEV9 243 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 SPPL3Q8TCT6 385 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 SEPT1Q8WYJ6 367 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 GPRASP2Q96D09 838 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 PABPC5Q96DU9 382 aaKnown RBP9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 IL17RAQ96F46 866 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 YME1L1Q96TA2 773 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 PHOX2BQ99453 314 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 ESYT1Q9BSJ8 1104 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 FAM49AQ9H0Q0 323 aaPredicted RBP9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 PSTPIP2Q9H939 334 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 JADE2Q9NQC1 790 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 KCNH7Q9NS40 1196 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 PLAGL2Q9UPG8 496 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 CNTNAP5Q8WYK1 1306 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 NRCAMQ92823 1304 aa9.52□□□□□ -0.89
SCARNA20.3-201ENST00000516913 IGKV6D-21A0A0A0MT36 114 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 FAM86B1E9PN63 330 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 PPFIA3O75145 1194 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 CAND2O75155 1236 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 STAM2O75886 525 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 ATG7O95352 703 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 FAM86B2P0C5J1 330 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 LIFRP42702 1097 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 TRDNQ13061 729 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 ADAM15Q13444 863 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 RALYLQ86SE5 291 aaKnown RBP9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 KIAA0319LQ8IZA0 1049 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 SMARCC2Q8TAQ2 1214 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 FAM122AQ96E09 287 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 RRP36Q96EU6 259 aaKnown RBP9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 MSLNLQ96KJ4 702 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 RNF19AQ9NV58 838 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 CLDND1Q9NY35 253 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 CDH22Q9UJ99 828 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 TUBE1Q9UJT0 475 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 PADI3Q9ULW8 664 aa9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 RIF1Q5UIP0 2472 aaKnown RBP9.51□□□□□ -0.89
SCARNA20.3-201ENST00000516913 IGLV3-22A0A075B6J6 115 aa9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 STXBP3O00186 592 aa9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 MEIS1O00470 390 aa9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 MBTPS2O43462 519 aa9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 CTNNB1P35222 781 aa9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 CLK2P49760 499 aaKnown RBP9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 ACTR2P61160 394 aa9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 MRPS6P82932 125 aaKnown RBP9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 GNPTABQ3T906 1256 aa9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 FAM102BQ5T8I3 360 aa9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 XRRA1Q6P2D8 792 aa9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 ABHD15Q6UXT9 468 aa9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 HFE2Q6ZVN8 426 aa9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 SGMS1Q86VZ5 419 aa9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 FIBCD1Q8N539 461 aa9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 MXRA8Q9BRK3 442 aa9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 NSUN3Q9H649 340 aaKnown RBP9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 AGO4Q9HCK5 861 aaKnown RBP9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 NOC2LQ9Y3T9 749 aaKnown RBP9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 V9GY48 417 aaPredicted RBP9.5□□□□□ -0.89
SCARNA20.3-201ENST00000516913 ADGRA3Q8IWK6 1321 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms