RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 GABREP78334 506 aa4.43□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ZNF585AQ6P3V2 769 aa4.43□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ARHGAP36Q6ZRI8 547 aa4.43□□□□□ -1.7
RNU6-1088P-201ENST00000516850 C16orf59Q7L2K0 433 aa4.43□□□□□ -1.7
RNU6-1088P-201ENST00000516850 GIMAP8Q8ND71 665 aaPredicted RBP4.43□□□□□ -1.7
RNU6-1088P-201ENST00000516850 CARD11Q9BXL7 1154 aa4.43□□□□□ -1.7
RNU6-1088P-201ENST00000516850 SEC61A2Q9H9S3 476 aa4.43□□□□□ -1.7
RNU6-1088P-201ENST00000516850 SRRDQ9UH36 339 aa4.43□□□□□ -1.7
RNU6-1088P-201ENST00000516850 MSRB2Q9Y3D2 182 aa4.43□□□□□ -1.7
RNU6-1088P-201ENST00000516850 TSC22D4Q9Y3Q8 395 aa4.43□□□□□ -1.7
RNU6-1088P-201ENST00000516850 TELO2Q9Y4R8 837 aa4.43□□□□□ -1.7
RNU6-1088P-201ENST00000516850 PCDHA8Q9Y5H6 950 aa4.43□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ATP23Q9Y6H3 246 aa4.43□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ASXL2Q76L83 1435 aa4.43□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ACOT7O00154 380 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 MATN3O15232 486 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 CUTAO60888 179 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ZNF623O75123 536 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 SRGAP2CP0DJJ0 459 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 PYGMP11217 842 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 PTPN1P18031 435 aaKnown RBP4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 KRT15P19012 456 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 TNFRSF1AP19438 455 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 GJA4P35212 333 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 SELENOPP49908 381 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 DBPQ10586 325 aaPredicted RBP4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 USP10Q14694 798 aaKnown RBP4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 FAM209AQ5JX71 171 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 GPR155Q7Z3F1 870 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ZC3H7AQ8IWR0 971 aaKnown RBP4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 PALM2Q8IXS6 379 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 LMF1Q96S06 567 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 PTPN18Q99952 460 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 DHRS4Q9BTZ2 278 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 SLC39A2Q9NP94 309 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 SLC4A7Q9Y6M7 1214 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 KDM2BQ8NHM5 1336 aa4.42□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ESYT3A0FGR9 886 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 MUSKO15146 869 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 IL18BPO95998 194 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 FSHBP01225 129 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 PDE6AP16499 860 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 POLD1P28340 1107 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 CSF2RBP32927 897 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 LONRF2Q1L5Z9 754 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 WDR72Q3MJ13 1102 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ZMAT1Q5H9K5 638 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 ZC3H12BQ5HYM0 836 aaKnown RBP4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 USP51Q70EK9 711 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 OSTM1Q86WC4 334 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 SH3RF2Q8TEC5 729 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 LRRC37BQ96QE4 947 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 KRTAP17-1Q9BYP8 105 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 KRTAP3-1Q9BYR8 98 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 KATNBL1Q9H079 304 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 IGSF5Q9NSI5 407 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 SRPK3Q9UPE1 567 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 PCDHA9Q9Y5H5 950 aa4.41□□□□□ -1.7
RNU6-1088P-201ENST00000516850 TCRBV5S4A2TA0A5A2 114 aa4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 PRAMEF25A6NGN4 478 aa4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 WNT9AO14904 365 aa4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 ADCY3O60266 1144 aa4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 EFCAB14O75071 495 aa4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 CNOT4O95628 575 aaKnown RBP4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 PTGS1P23219 599 aa4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 GDF5P43026 501 aa4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 DNM2P50570 870 aa4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 RAC3P60763 192 aa4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 FIGNQ5HY92 759 aa4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 SPRED1Q7Z699 444 aa4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 PTRH1Q86Y79 214 aaKnown RBP4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 DNERQ8NFT8 737 aa4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 PCDH19Q8TAB3 1148 aa4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 SCYL1Q96KG9 808 aa4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 CD248Q9HCU0 757 aa4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 FBXO10Q9UK96 956 aa4.4□□□□□ -1.71
RNU6-1088P-201ENST00000516850 CCDC66A2RUB6 948 aa4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 FAM90A27PA6NNH2 459 aa4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 PATE3B3GLJ2 98 aa4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 ARVCFO00192 962 aa4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 CRTAMO95727 393 aa4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 FAM153BP0C7A2 387 aa4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 C6P13671 934 aa4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 RRADP55042 308 aa4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 SOGA3Q5TF21 947 aa4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 CXXC5Q7LFL8 322 aaKnown RBP4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 TAX1BP1Q86VP1 789 aa4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 Q8TCH9 128 aa4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 GNRHR2Q96P88 292 aa4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 MEGF9Q9H1U4 602 aa4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 INCENPQ9NQS7 918 aa4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 GALNT8Q9NY28 637 aa4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 NDOR1Q9UHB4 597 aa4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 ZFR2Q9UPR6 939 aaKnown RBP4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 MRPS23Q9Y3D9 190 aaKnown RBP4.39□□□□□ -1.71
RNU6-1088P-201ENST00000516850 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.38□□□□□ -1.71
RNU6-1088P-201ENST00000516850 MAN2B1O00754 1011 aa4.38□□□□□ -1.71
RNU6-1088P-201ENST00000516850 AKAP8O43823 692 aaKnown RBP4.38□□□□□ -1.71
RNU6-1088P-201ENST00000516850 DIAPH1O60610 1272 aaKnown RBP4.38□□□□□ -1.71
RNU6-1088P-201ENST00000516850 CLASP2O75122 1294 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms