RNA–Protein interactions for RNA: ENST00000515847.1

LIMCH1-222, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 4

Gene LIMCH1, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-222ENST00000515847 IGLV3-22A0A075B6J6 115 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 FAM86B1E9PN63 330 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 BACH1O14867 736 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 TLR3O15455 904 aaKnown RBP8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 TDP2O95551 362 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 MMP3P08254 477 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 MYL3P08590 195 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 FAM86B2P0C5J1 330 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 OR52Z1P0C646 297 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 KCNA2P16389 499 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 TXLNAP40222 546 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 PTPN11Q06124 597 aaPredicted RBP8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 CSPP1Q1MSJ5 1256 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 CXCL17Q6UXB2 119 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 CYFIP1Q7L576 1253 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 CCDC155Q8N6L0 562 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 RNF166Q96A37 237 aaPredicted RBP8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 VTI1AQ96AJ9 217 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 CCDC43Q96MW1 224 aaKnown RBP8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 SMARCAD1Q9H4L7 1026 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 BCAS3Q9H6U6 928 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 ERAP1Q9NZ08 941 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 PKD2L1Q9P0L9 805 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 CFAP45Q9UL16 551 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 SAMM50Q9Y512 469 aa8.73□□□□□ -1.01
LIMCH1-222ENST00000515847 SCN10AQ9Y5Y9 1956 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 SLC26A4O43511 780 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 ATP9AO75110 1047 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 F2P00734 622 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 SUPT20HL2P0C7V6 817 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 ZSCAN22P10073 491 aaPredicted RBP8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 ARP10275 920 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 HOXD8P13378 290 aaPredicted RBP8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 MCM7P33993 719 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 PRPHP41219 470 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 RTP1P59025 263 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 PSMC6P62333 389 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 PURAQ00577 322 aaKnown RBP8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 SNX17Q15036 470 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 MYSM1Q5VVJ2 828 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 ARL6IP4Q66PJ3 421 aaKnown RBP8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 SLC39A5Q6ZMH5 540 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 MIER3Q7Z3K6 550 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 EXOC8Q8IYI6 725 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 C7orf61Q8IZ16 206 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 KCTD17Q8N5Z5 321 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 ETNPPLQ8TBG4 499 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 DPF3Q92784 378 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 GLG1Q92896 1179 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 SLC5A5Q92911 643 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 KCNMB3Q9NPA1 279 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 PRKAG2Q9UGJ0 569 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 LHX6Q9UPM6 363 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 NOD1Q9Y239 953 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 TELO2Q9Y4R8 837 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 PPME1Q9Y570 386 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 PCDHA10Q9Y5I2 948 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 KDM3AQ9Y4C1 1321 aa8.72□□□□□ -1.01
LIMCH1-222ENST00000515847 MSH4O15457 936 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 EDIL3O43854 480 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 EVI5O60447 810 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 F13A1P00488 732 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 ZNF286BP0CG31 522 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 ATP2B1P20020 1258 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 MUTP22033 750 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 TCF7P36402 384 aaPredicted RBP8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 ACTR2P61160 394 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 SP4Q02446 784 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 PPP2R5CQ13362 524 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 SF3A1Q15459 793 aaKnown RBP8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 HSDL1Q3SXM5 330 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 TRIM60Q495X7 471 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 EARS2Q5JPH6 523 aaKnown RBP8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 C1orf53Q5VUE5 145 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 NFRKBQ6P4R8 1299 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 DTHD1Q6ZMT9 781 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 PLPPR4Q7Z2D5 763 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 CKAP2LQ8IYA6 745 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 C7orf31Q8N865 590 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 KCNG4Q8TDN1 519 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 AK8Q96MA6 479 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 UIMC1Q96RL1 719 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 GPR20Q99678 358 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 JPH2Q9BR39 696 aaPredicted RBP8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 PCDHA12Q9UN75 941 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 MTMR6Q9Y217 621 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 ATP11BQ9Y2G3 1177 aa8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 MORC2Q9Y6X9 1032 aaPredicted RBP8.71□□□□□ -1.02
LIMCH1-222ENST00000515847 DCDC2CA8MYV0 355 aa8.7□□□□□ -1.02
LIMCH1-222ENST00000515847 KIF28PB7ZC32 967 aa8.7□□□□□ -1.02
LIMCH1-222ENST00000515847 DDX39AO00148 427 aaKnown RBP8.7□□□□□ -1.02
LIMCH1-222ENST00000515847 CHMP2AO43633 222 aa8.7□□□□□ -1.02
LIMCH1-222ENST00000515847 SLC37A4O43826 429 aa8.7□□□□□ -1.02
LIMCH1-222ENST00000515847 PQBP1O60828 265 aaKnown RBP8.7□□□□□ -1.02
LIMCH1-222ENST00000515847 PSMD10O75832 226 aa8.7□□□□□ -1.02
LIMCH1-222ENST00000515847 YEATS4O95619 227 aa8.7□□□□□ -1.02
LIMCH1-222ENST00000515847 LGALS2P05162 132 aa8.7□□□□□ -1.02
LIMCH1-222ENST00000515847 STAT5BP51692 787 aa8.7□□□□□ -1.02
LIMCH1-222ENST00000515847 KRT85P78386 507 aa8.7□□□□□ -1.02
LIMCH1-222ENST00000515847 RESTQ13127 1097 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms