RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 MYOCDQ8IZQ8 938 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 DUSP9Q99956 384 aaKnown RBP22.35■■□□□ 1.17
TRIO-223ENST00000515710 SRRTQ9BXP5 876 aaKnown RBP22.35■■□□□ 1.17
TRIO-223ENST00000515710 MROH8Q9H579 483 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 TXNRD2Q9NNW7 524 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 SAMM50Q9Y512 469 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 PCDHA2Q9Y5H9 948 aa22.35■■□□□ 1.17
TRIO-223ENST00000515710 SPATA31C2B4DYI2 1134 aa22.34■■□□□ 1.17
TRIO-223ENST00000515710 RGS20O76081 388 aa22.34■■□□□ 1.17
TRIO-223ENST00000515710 ICAM3P32942 547 aa22.34■■□□□ 1.17
TRIO-223ENST00000515710 QARSP47897 775 aaKnown RBP22.34■■□□□ 1.17
TRIO-223ENST00000515710 CNTN2Q02246 1040 aa22.34■■□□□ 1.17
TRIO-223ENST00000515710 Q3C1V9 767 aa22.34■■□□□ 1.17
TRIO-223ENST00000515710 TCP11X2Q5H9J9 407 aa22.34■■□□□ 1.17
TRIO-223ENST00000515710 BANK1Q8NDB2 785 aa22.34■■□□□ 1.17
TRIO-223ENST00000515710 SHCBP1Q8NEM2 672 aa22.34■■□□□ 1.17
TRIO-223ENST00000515710 PKNOX2Q96KN3 472 aa22.34■■□□□ 1.17
TRIO-223ENST00000515710 REEP2Q9BRK0 252 aa22.34■■□□□ 1.17
TRIO-223ENST00000515710 WRAP73Q9P2S5 460 aaPredicted RBP22.34■■□□□ 1.17
TRIO-223ENST00000515710 KCNJ18B7U540 433 aa22.33■■□□□ 1.17
TRIO-223ENST00000515710 KCNA2P16389 499 aa22.33■■□□□ 1.17
TRIO-223ENST00000515710 KCNJ12Q14500 433 aa22.33■■□□□ 1.17
TRIO-223ENST00000515710 C1orf186Q6ZWK4 172 aa22.33■■□□□ 1.17
TRIO-223ENST00000515710 ANKRD23Q86SG2 305 aa22.33■■□□□ 1.17
TRIO-223ENST00000515710 FAM114A1Q8IWE2 563 aa22.33■■□□□ 1.17
TRIO-223ENST00000515710 CSGALNACT2Q8N6G5 542 aa22.33■■□□□ 1.17
TRIO-223ENST00000515710 FAM133AQ8N9E0 248 aa22.33■■□□□ 1.17
TRIO-223ENST00000515710 KCNF1Q9H3M0 494 aa22.33■■□□□ 1.17
TRIO-223ENST00000515710 SEMA6BQ9H3T3 888 aa22.33■■□□□ 1.17
TRIO-223ENST00000515710 INTS13Q9NVM9 706 aa22.33■■□□□ 1.17
TRIO-223ENST00000515710 COL4A3BPQ9Y5P4 624 aa22.33■■□□□ 1.17
TRIO-223ENST00000515710 CCL15-CCL14A0A0B4J2E2 113 aa22.33■■□□□ 1.16
TRIO-223ENST00000515710 ZBTB48P10074 688 aaPredicted RBP22.33■■□□□ 1.16
TRIO-223ENST00000515710 GAP43P17677 238 aa22.33■■□□□ 1.16
TRIO-223ENST00000515710 EEF1GP26641 437 aaKnown RBP22.33■■□□□ 1.16
TRIO-223ENST00000515710 CACNB1Q02641 598 aaPredicted RBP22.33■■□□□ 1.16
TRIO-223ENST00000515710 LRRC63Q05C16 580 aa22.33■■□□□ 1.16
TRIO-223ENST00000515710 CCL15Q16663 113 aa22.33■■□□□ 1.16
TRIO-223ENST00000515710 MPHOSPH6Q99547 160 aaKnown RBP22.33■■□□□ 1.16
TRIO-223ENST00000515710 RUSC1Q9BVN2 902 aa22.33■■□□□ 1.16
TRIO-223ENST00000515710 NMRK2Q9NPI5 230 aa22.33■■□□□ 1.16
TRIO-223ENST00000515710 MAGEC2Q9UBF1 373 aaPredicted RBP22.33■■□□□ 1.16
TRIO-223ENST00000515710 DBR1Q9UK59 544 aaKnown RBP22.33■■□□□ 1.16
TRIO-223ENST00000515710 SOWAHBA6NEL2 793 aa22.32■■□□□ 1.16
TRIO-223ENST00000515710 FGFR1OPO95684 399 aaKnown RBP22.32■■□□□ 1.16
TRIO-223ENST00000515710 EDNRBP24530 442 aa22.32■■□□□ 1.16
TRIO-223ENST00000515710 ERVK-9P63128 1117 aa22.32■■□□□ 1.16
TRIO-223ENST00000515710 ERVK-24P63145 666 aa22.32■■□□□ 1.16
TRIO-223ENST00000515710 RAD51AP2Q09MP3 1159 aa22.32■■□□□ 1.16
TRIO-223ENST00000515710 KRT31Q15323 416 aa22.32■■□□□ 1.16
TRIO-223ENST00000515710 C4orf19Q8IY42 314 aa22.32■■□□□ 1.16
TRIO-223ENST00000515710 SMAP1Q8IYB5 467 aaPredicted RBP22.32■■□□□ 1.16
TRIO-223ENST00000515710 TSG101Q99816 390 aa22.32■■□□□ 1.16
TRIO-223ENST00000515710 ZHX3Q9H4I2 956 aa22.32■■□□□ 1.16
TRIO-223ENST00000515710 ARHGEF35A5YM69 484 aa22.31■■□□□ 1.16
TRIO-223ENST00000515710 PDHXO00330 501 aa22.31■■□□□ 1.16
TRIO-223ENST00000515710 TBCAO75347 108 aaKnown RBP22.31■■□□□ 1.16
TRIO-223ENST00000515710 CCNE2O96020 404 aa22.31■■□□□ 1.16
TRIO-223ENST00000515710 PSMC5P62195 406 aa22.31■■□□□ 1.16
TRIO-223ENST00000515710 SPRYD7Q5W111 196 aa22.31■■□□□ 1.16
TRIO-223ENST00000515710 IRF2BP1Q8IU81 584 aa22.31■■□□□ 1.16
TRIO-223ENST00000515710 LRRC8AQ8IWT6 810 aa22.31■■□□□ 1.16
TRIO-223ENST00000515710 ASTN1O14525 1302 aa22.31■■□□□ 1.16
TRIO-223ENST00000515710 BTBD19C9JJ37 291 aa22.31■■□□□ 1.16
TRIO-223ENST00000515710 DKC1O60832 514 aaKnown RBP eCLIP22.31■■□□□ 1.16
TRIO-223ENST00000515710 KCTD2Q14681 263 aa22.31■■□□□ 1.16
TRIO-223ENST00000515710 LRRC41Q15345 812 aa22.31■■□□□ 1.16
TRIO-223ENST00000515710 CCDC150Q8NCX0 1101 aa22.31■■□□□ 1.16
TRIO-223ENST00000515710 CACTINQ8WUQ7 758 aaKnown RBP22.31■■□□□ 1.16
TRIO-223ENST00000515710 MMP19Q99542 508 aa22.31■■□□□ 1.16
TRIO-223ENST00000515710 ODF2LQ9ULJ1 636 aa22.31■■□□□ 1.16
TRIO-223ENST00000515710 PCDHA10Q9Y5I2 948 aa22.31■■□□□ 1.16
TRIO-223ENST00000515710 LCTP09848 1927 aa22.3■■□□□ 1.16
TRIO-223ENST00000515710 ZBTB39O15060 712 aa22.3■■□□□ 1.16
TRIO-223ENST00000515710 ZNF500O60304 480 aaPredicted RBP22.3■■□□□ 1.16
TRIO-223ENST00000515710 GUCY2CP25092 1073 aa22.3■■□□□ 1.16
TRIO-223ENST00000515710 COPB1P53618 953 aaKnown RBP22.3■■□□□ 1.16
TRIO-223ENST00000515710 CHADLQ6NUI6 762 aa22.3■■□□□ 1.16
TRIO-223ENST00000515710 BRI3BPQ8WY22 251 aa22.3■■□□□ 1.16
TRIO-223ENST00000515710 CYP2C8P10632 490 aa22.29■■□□□ 1.16
TRIO-223ENST00000515710 GCLCP48506 637 aaPredicted RBP22.29■■□□□ 1.16
TRIO-223ENST00000515710 CCNA1P78396 465 aa22.29■■□□□ 1.16
TRIO-223ENST00000515710 SPECC1LQ69YQ0 1117 aa22.29■■□□□ 1.16
TRIO-223ENST00000515710 GPRC5AQ8NFJ5 357 aa22.29■■□□□ 1.16
TRIO-223ENST00000515710 SMCR8Q8TEV9 937 aaPredicted RBP22.29■■□□□ 1.16
TRIO-223ENST00000515710 TBC1D7Q9P0N9 293 aa22.29■■□□□ 1.16
TRIO-223ENST00000515710 SEL1LQ9UBV2 794 aa22.29■■□□□ 1.16
TRIO-223ENST00000515710 SLC9A2Q9UBY0 812 aa22.29■■□□□ 1.16
TRIO-223ENST00000515710 DNAJC25-GNG10A0A024R161 153 aa22.29■■□□□ 1.16
TRIO-223ENST00000515710 LOC102724159A0A0B4J2E5 919 aa22.29■■□□□ 1.16
TRIO-223ENST00000515710 FAM13AO94988 1023 aa22.29■■□□□ 1.16
TRIO-223ENST00000515710 ITGBL1O95965 494 aaPredicted RBP22.29■■□□□ 1.16
TRIO-223ENST00000515710 PWP2Q15269 919 aaKnown RBP22.29■■□□□ 1.16
TRIO-223ENST00000515710 CST9Q5W186 159 aa22.29■■□□□ 1.16
TRIO-223ENST00000515710 SFR1Q86XK3 245 aa22.29■■□□□ 1.16
TRIO-223ENST00000515710 GLIS3Q8NEA6 775 aa22.29■■□□□ 1.16
TRIO-223ENST00000515710 JPH1Q9HDC5 661 aaPredicted RBP22.29■■□□□ 1.16
TRIO-223ENST00000515710 OLFML3Q9NRN5 406 aa22.29■■□□□ 1.16
TRIO-223ENST00000515710 N4BP3O15049 544 aa22.28■■□□□ 1.16
TRIO-223ENST00000515710 PSAPP07602 524 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms