RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 FAM126BQ8IXS8 530 aa13.4□□□□□ -0.26
SNF8-215ENST00000515572 C4orf32Q8N8J7 132 aa13.4□□□□□ -0.26
SNF8-215ENST00000515572 DPF3Q92784 378 aa13.4□□□□□ -0.26
SNF8-215ENST00000515572 ATP6V0A1Q93050 837 aa13.4□□□□□ -0.26
SNF8-215ENST00000515572 PCYT2Q99447 389 aa13.4□□□□□ -0.26
SNF8-215ENST00000515572 RAB34Q9BZG1 259 aa13.4□□□□□ -0.26
SNF8-215ENST00000515572 ATP11BQ9Y2G3 1177 aa13.4□□□□□ -0.26
SNF8-215ENST00000515572 MAFBQ9Y5Q3 323 aaPredicted RBP13.4□□□□□ -0.26
SNF8-215ENST00000515572 IGSF9BQ9UPX0 1349 aa13.39□□□□□ -0.27
SNF8-215ENST00000515572 PQBP1O60828 265 aaKnown RBP13.39□□□□□ -0.27
SNF8-215ENST00000515572 DKC1O60832 514 aaKnown RBP eCLIP13.39□□□□□ -0.27
SNF8-215ENST00000515572 F13A1P00488 732 aa13.39□□□□□ -0.27
SNF8-215ENST00000515572 GNAT1P11488 350 aa13.39□□□□□ -0.27
SNF8-215ENST00000515572 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
SNF8-215ENST00000515572 CHMP4BP1P59074 171 aa13.39□□□□□ -0.27
SNF8-215ENST00000515572 ATP2C1P98194 919 aaPredicted RBP13.39□□□□□ -0.27
SNF8-215ENST00000515572 TLE2Q04725 743 aa13.39□□□□□ -0.27
SNF8-215ENST00000515572 FAM47CQ5HY64 1035 aa13.39□□□□□ -0.27
SNF8-215ENST00000515572 ARL6IP4Q66PJ3 421 aaKnown RBP13.39□□□□□ -0.27
SNF8-215ENST00000515572 NCAPH2Q6IBW4 605 aa13.39□□□□□ -0.27
SNF8-215ENST00000515572 PDXDC2PQ6P474 469 aa13.39□□□□□ -0.27
SNF8-215ENST00000515572 NEK9Q8TD19 979 aa13.39□□□□□ -0.27
SNF8-215ENST00000515572 FAM167AQ96KS9 214 aa13.39□□□□□ -0.27
SNF8-215ENST00000515572 RNPEPQ9H4A4 650 aa13.39□□□□□ -0.27
SNF8-215ENST00000515572 HDAC6Q9UBN7 1215 aa13.39□□□□□ -0.27
SNF8-215ENST00000515572 GTF2IRD1Q9UHL9 959 aa13.39□□□□□ -0.27
SNF8-215ENST00000515572 NR2E3Q9Y5X4 410 aa13.39□□□□□ -0.27
SNF8-215ENST00000515572 NRCAMQ92823 1304 aa13.39□□□□□ -0.27
SNF8-215ENST00000515572 CD4P01730 458 aa13.38□□□□□ -0.27
SNF8-215ENST00000515572 CLTBP09497 229 aa13.38□□□□□ -0.27
SNF8-215ENST00000515572 SMIM10L2AP0DMW4 78 aa13.38□□□□□ -0.27
SNF8-215ENST00000515572 SMIM10L2BP0DMW5 78 aa13.38□□□□□ -0.27
SNF8-215ENST00000515572 MARK3P27448 753 aa13.38□□□□□ -0.27
SNF8-215ENST00000515572 HOXC8P31273 242 aa13.38□□□□□ -0.27
SNF8-215ENST00000515572 TECP42680 631 aa13.38□□□□□ -0.27
SNF8-215ENST00000515572 EPHA7Q15375 998 aa13.38□□□□□ -0.27
SNF8-215ENST00000515572 DTHD1Q6ZMT9 781 aa13.38□□□□□ -0.27
SNF8-215ENST00000515572 CKAP2LQ8IYA6 745 aa13.38□□□□□ -0.27
SNF8-215ENST00000515572 ATP8B4Q8TF62 1192 aa13.38□□□□□ -0.27
SNF8-215ENST00000515572 ZNF396Q96N95 335 aaPredicted RBP13.38□□□□□ -0.27
SNF8-215ENST00000515572 GABBR1Q9UBS5 961 aa13.38□□□□□ -0.27
SNF8-215ENST00000515572 STK24Q9Y6E0 443 aa13.38□□□□□ -0.27
SNF8-215ENST00000515572 TRIP12Q14669 1992 aaPredicted RBP13.38□□□□□ -0.27
SNF8-215ENST00000515572 COL1A2P08123 1366 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 POTEB3A0JP26 581 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 C17orf102A2RUQ5 167 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 RRN3P2A6NIE6 340 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 EML1O00423 815 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 HBP1O60381 514 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 B4GALT4O60513 344 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 BRD1O95696 1058 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 P4HBP07237 508 aaKnown RBP13.37□□□□□ -0.27
SNF8-215ENST00000515572 QARSP47897 775 aaKnown RBP13.37□□□□□ -0.27
SNF8-215ENST00000515572 PSMC5P62195 406 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 FAAP100Q0VG06 881 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 PKP1Q13835 747 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 PDIA5Q14554 519 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 PLCB4Q15147 1175 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 SF3A1Q15459 793 aaKnown RBP13.37□□□□□ -0.27
SNF8-215ENST00000515572 ATL3Q6DD88 541 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 POTEBQ6S5H4 581 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 C7orf61Q8IZ16 206 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 ERMNQ8TAM6 284 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
SNF8-215ENST00000515572 TRPC6Q9Y210 931 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 NOD1Q9Y239 953 aa13.37□□□□□ -0.27
SNF8-215ENST00000515572 POTEMA6NI47 508 aa13.36□□□□□ -0.27
SNF8-215ENST00000515572 OATP04181 439 aa13.36□□□□□ -0.27
SNF8-215ENST00000515572 NUCB2P80303 420 aa13.36□□□□□ -0.27
SNF8-215ENST00000515572 PPFIA1Q13136 1202 aa13.36□□□□□ -0.27
SNF8-215ENST00000515572 PTGISQ16647 500 aa13.36□□□□□ -0.27
SNF8-215ENST00000515572 FOXD4L5Q5VV16 416 aaPredicted RBP13.36□□□□□ -0.27
SNF8-215ENST00000515572 HAUS3Q68CZ6 603 aa13.36□□□□□ -0.27
SNF8-215ENST00000515572 GDF6Q6KF10 455 aaPredicted RBP13.36□□□□□ -0.27
SNF8-215ENST00000515572 FAM173BQ6P4H8 233 aa13.36□□□□□ -0.27
SNF8-215ENST00000515572 IGSF22Q8N9C0 903 aa13.36□□□□□ -0.27
SNF8-215ENST00000515572 FOXD4L4Q8WXT5 416 aaPredicted RBP13.36□□□□□ -0.27
SNF8-215ENST00000515572 EIF2AK1Q9BQI3 630 aaKnown RBP13.36□□□□□ -0.27
SNF8-215ENST00000515572 TRPV6Q9H1D0 765 aa13.36□□□□□ -0.27
SNF8-215ENST00000515572 ZSWIM4Q9H7M6 989 aa13.36□□□□□ -0.27
SNF8-215ENST00000515572 NRBP2Q9NSY0 501 aa13.36□□□□□ -0.27
SNF8-215ENST00000515572 TRMT13Q9NUP7 481 aaKnown RBP13.36□□□□□ -0.27
SNF8-215ENST00000515572 PRKAG2Q9UGJ0 569 aa13.36□□□□□ -0.27
SNF8-215ENST00000515572 ATP6V1DQ9Y5K8 247 aa13.36□□□□□ -0.27
SNF8-215ENST00000515572 MORC2Q9Y6X9 1032 aaPredicted RBP13.36□□□□□ -0.27
SNF8-215ENST00000515572 LOXHD1Q8IVV2 1947 aa13.36□□□□□ -0.27
SNF8-215ENST00000515572 LTBP2Q14767 1821 aa13.36□□□□□ -0.27
SNF8-215ENST00000515572 ARID2Q68CP9 1835 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 KIAA0355O15063 1070 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 ZNF862O60290 1169 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 INSRRP14616 1297 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 ATP4AP20648 1035 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 MUTP22033 750 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 DDIT3P35638 169 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 NASPP49321 788 aaPredicted RBP13.35□□□□□ -0.27
SNF8-215ENST00000515572 ADAM17P78536 824 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 PRKCEQ02156 737 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 PTK7Q13308 1070 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 GRIK4Q16099 956 aa13.35□□□□□ -0.27
SNF8-215ENST00000515572 UGCGQ16739 394 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms