RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 CDCA3Q99618 268 aaPredicted RBP13.73□□□□□ -0.21
CSF1R-208ENST00000515239 APOL5Q9BWW9 433 aa13.73□□□□□ -0.21
CSF1R-208ENST00000515239 CDH22Q9UJ99 828 aa13.73□□□□□ -0.21
CSF1R-208ENST00000515239 TTC41PQ6P2S7 1318 aa13.72□□□□□ -0.21
CSF1R-208ENST00000515239 CCDC171Q6TFL3 1326 aa13.72□□□□□ -0.21
CSF1R-208ENST00000515239 TPRP12270 2363 aaKnown RBP13.72□□□□□ -0.21
CSF1R-208ENST00000515239 FSD2A1L4K1 749 aa13.72□□□□□ -0.21
CSF1R-208ENST00000515239 CCER2I3L3R5 266 aa13.72□□□□□ -0.21
CSF1R-208ENST00000515239 FSCN2O14926 492 aa13.72□□□□□ -0.21
CSF1R-208ENST00000515239 CD52P31358 61 aa13.72□□□□□ -0.21
CSF1R-208ENST00000515239 TECP42680 631 aa13.72□□□□□ -0.21
CSF1R-208ENST00000515239 UTP14CQ5TAP6 766 aaKnown RBP13.72□□□□□ -0.21
CSF1R-208ENST00000515239 TAF2Q6P1X5 1199 aa13.72□□□□□ -0.21
CSF1R-208ENST00000515239 METTL7BQ6UX53 244 aa13.72□□□□□ -0.21
CSF1R-208ENST00000515239 TSHZ1Q6ZSZ6 1077 aa13.72□□□□□ -0.21
CSF1R-208ENST00000515239 CYFIP1Q7L576 1253 aa13.72□□□□□ -0.21
CSF1R-208ENST00000515239 RASGRP4Q8TDF6 673 aa13.72□□□□□ -0.21
CSF1R-208ENST00000515239 ZKSCAN3Q9BRR0 538 aa13.72□□□□□ -0.21
CSF1R-208ENST00000515239 NR2E1Q9Y466 385 aa13.72□□□□□ -0.21
CSF1R-208ENST00000515239 CDY2AQ9Y6F7 541 aa13.72□□□□□ -0.21
CSF1R-208ENST00000515239 WDR87Q6ZQQ6 2873 aa13.72□□□□□ -0.21
CSF1R-208ENST00000515239 KMT2BQ9UMN6 2715 aaPredicted RBP13.71□□□□□ -0.21
CSF1R-208ENST00000515239 SPATA31C2B4DYI2 1134 aa13.71□□□□□ -0.21
CSF1R-208ENST00000515239 C2CD4DB7Z1M9 353 aa13.71□□□□□ -0.21
CSF1R-208ENST00000515239 PI15O43692 258 aa13.71□□□□□ -0.21
CSF1R-208ENST00000515239 PPP1R11O60927 126 aaPredicted RBP13.71□□□□□ -0.21
CSF1R-208ENST00000515239 FGF18O76093 207 aa13.71□□□□□ -0.21
CSF1R-208ENST00000515239 STAG3L1P0CL83 205 aa13.71□□□□□ -0.21
CSF1R-208ENST00000515239 CCND2P30279 289 aa13.71□□□□□ -0.21
CSF1R-208ENST00000515239 NEDD9Q14511 834 aa13.71□□□□□ -0.21
CSF1R-208ENST00000515239 MARCH8Q5T0T0 291 aa13.71□□□□□ -0.21
CSF1R-208ENST00000515239 MFSD6Q6ZSS7 791 aa13.71□□□□□ -0.21
CSF1R-208ENST00000515239 PNMA1Q8ND90 353 aa13.71□□□□□ -0.21
CSF1R-208ENST00000515239 OTUD7AQ8TE49 926 aaPredicted RBP13.71□□□□□ -0.21
CSF1R-208ENST00000515239 DNAJB3Q8WWF6 145 aa13.71□□□□□ -0.21
CSF1R-208ENST00000515239 CNTNAP3BQ96NU0 1288 aa13.71□□□□□ -0.21
CSF1R-208ENST00000515239 AMNQ9BXJ7 453 aa13.71□□□□□ -0.21
CSF1R-208ENST00000515239 CNTNAP3Q9BZ76 1288 aa13.71□□□□□ -0.21
CSF1R-208ENST00000515239 CHMP4BQ9H444 224 aaKnown RBP13.71□□□□□ -0.21
CSF1R-208ENST00000515239 ZNF215Q9UL58 517 aaPredicted RBP13.71□□□□□ -0.21
CSF1R-208ENST00000515239 KAT6AQ92794 2004 aa13.71□□□□□ -0.22
CSF1R-208ENST00000515239 DMXL1Q9Y485 3027 aa13.71□□□□□ -0.22
CSF1R-208ENST00000515239 MBLAC1A4D2B0 266 aaPredicted RBP13.7□□□□□ -0.22
CSF1R-208ENST00000515239 DHX16O60231 1041 aaKnown RBP13.7□□□□□ -0.22
CSF1R-208ENST00000515239 ASGR2P07307 311 aa13.7□□□□□ -0.22
CSF1R-208ENST00000515239 HOXB8P17481 243 aaPredicted RBP13.7□□□□□ -0.22
CSF1R-208ENST00000515239 HAND2P61296 217 aa13.7□□□□□ -0.22
CSF1R-208ENST00000515239 MRPS9P82933 396 aaKnown RBP13.7□□□□□ -0.22
CSF1R-208ENST00000515239 SEMA3FQ13275 785 aa13.7□□□□□ -0.22
CSF1R-208ENST00000515239 ASPRV1Q53RT3 343 aa13.7□□□□□ -0.22
CSF1R-208ENST00000515239 PDE12Q6L8Q7 609 aaKnown RBP13.7□□□□□ -0.22
CSF1R-208ENST00000515239 RSPH3Q86UC2 560 aa13.7□□□□□ -0.22
CSF1R-208ENST00000515239 MIER1Q8N108 512 aa13.7□□□□□ -0.22
CSF1R-208ENST00000515239 SAMD3Q8N6K7 520 aa13.7□□□□□ -0.22
CSF1R-208ENST00000515239 FTHL17Q9BXU8 183 aa13.7□□□□□ -0.22
CSF1R-208ENST00000515239 TSHZ2Q9NRE2 1034 aa13.7□□□□□ -0.22
CSF1R-208ENST00000515239 PCDHB12Q9Y5F1 795 aa13.7□□□□□ -0.22
CSF1R-208ENST00000515239 SQORQ9Y6N5 450 aa13.7□□□□□ -0.22
CSF1R-208ENST00000515239 MYH6P13533 1939 aa13.7□□□□□ -0.22
CSF1R-208ENST00000515239 PCP11498 1178 aaKnown RBP13.69□□□□□ -0.22
CSF1R-208ENST00000515239 SCG2P13521 617 aa13.69□□□□□ -0.22
CSF1R-208ENST00000515239 NPR3P17342 541 aa13.69□□□□□ -0.22
CSF1R-208ENST00000515239 MRPS6P82932 125 aaKnown RBP13.69□□□□□ -0.22
CSF1R-208ENST00000515239 CWF19L1Q69YN2 538 aaKnown RBP13.69□□□□□ -0.22
CSF1R-208ENST00000515239 TBC1D10CQ8IV04 446 aa13.69□□□□□ -0.22
CSF1R-208ENST00000515239 KIAA2013Q8IYS2 634 aa13.69□□□□□ -0.22
CSF1R-208ENST00000515239 INPP4AQ96PE3 977 aaPredicted RBP13.69□□□□□ -0.22
CSF1R-208ENST00000515239 MFSD1Q9H3U5 465 aa13.69□□□□□ -0.22
CSF1R-208ENST00000515239 POMKQ9H5K3 350 aa13.69□□□□□ -0.22
CSF1R-208ENST00000515239 HELLSQ9NRZ9 838 aa13.69□□□□□ -0.22
CSF1R-208ENST00000515239 TMEM260Q9NX78 707 aa13.69□□□□□ -0.22
CSF1R-208ENST00000515239 PADI3Q9ULW8 664 aa13.69□□□□□ -0.22
CSF1R-208ENST00000515239 PCDHA1Q9Y5I3 950 aa13.69□□□□□ -0.22
CSF1R-208ENST00000515239 DOCK5Q9H7D0 1870 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 PARP1P09874 1014 aaKnown RBP13.68□□□□□ -0.22
CSF1R-208ENST00000515239 SRGAP2BP0DMP2 458 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 APOBRQ0VD83 1088 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 PPFIA1Q13136 1202 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 PUM1Q14671 1186 aaKnown RBP eCLIP13.68□□□□□ -0.22
CSF1R-208ENST00000515239 ANGPT1Q15389 498 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 GRIK4Q16099 956 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 GNPTABQ3T906 1256 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 LLGL2Q6P1M3 1020 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 FCHSD1Q86WN1 690 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 CCDC105Q8IYK2 499 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 STAG2Q8N3U4 1231 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 MTMR8Q96EF0 704 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 ADAM7Q9H2U9 754 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 TMX1Q9H3N1 280 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 KAT14Q9H8E8 782 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 RTEL1Q9NZ71 1219 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 HCSTQ9UBK5 93 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 LIMD1Q9UGP4 676 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 TUBE1Q9UJT0 475 aa13.68□□□□□ -0.22
CSF1R-208ENST00000515239 ZMYM6O95789 1325 aa13.67□□□□□ -0.22
CSF1R-208ENST00000515239 CACNA1GO43497 2377 aa13.67□□□□□ -0.22
CSF1R-208ENST00000515239 HIDE1A8MVS5 230 aa13.67□□□□□ -0.22
CSF1R-208ENST00000515239 GCOM1H8Y6P7 765 aaPredicted RBP13.67□□□□□ -0.22
CSF1R-208ENST00000515239 LMNAP02545 664 aaKnown RBP13.67□□□□□ -0.22
CSF1R-208ENST00000515239 POLR2MP0CAP2 368 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms