RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 RGL3Q3MIN7 710 aa5.09□□□□□ -1.59
CAST-242ENST00000515063 EP400NLQ6ZTU2 488 aa5.09□□□□□ -1.59
CAST-242ENST00000515063 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.09□□□□□ -1.59
CAST-242ENST00000515063 NLGN4XQ8N0W4 816 aa5.09□□□□□ -1.59
CAST-242ENST00000515063 LCORQ96JN0 433 aaPredicted RBP5.09□□□□□ -1.59
CAST-242ENST00000515063 YTHDC1Q96MU7 727 aaKnown RBP5.09□□□□□ -1.59
CAST-242ENST00000515063 KCNJ15Q99712 375 aa5.09□□□□□ -1.59
CAST-242ENST00000515063 DHRS4Q9BTZ2 278 aa5.09□□□□□ -1.59
CAST-242ENST00000515063 LNPKQ9C0E8 428 aa5.09□□□□□ -1.59
CAST-242ENST00000515063 PDGFDQ9GZP0 370 aaPredicted RBP5.09□□□□□ -1.59
CAST-242ENST00000515063 ADAM7Q9H2U9 754 aa5.09□□□□□ -1.59
CAST-242ENST00000515063 L2HGDHQ9H9P8 463 aa5.09□□□□□ -1.59
CAST-242ENST00000515063 SNTG2Q9NY99 539 aa5.09□□□□□ -1.59
CAST-242ENST00000515063 ABCA8O94911 1581 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 DENND4BO75064 1496 aaPredicted RBP5.08□□□□□ -1.6
CAST-242ENST00000515063 ERCC6Q03468 1493 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 RPRD2Q5VT52 1461 aaKnown RBP5.08□□□□□ -1.6
CAST-242ENST00000515063 ABCC5O15440 1437 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 MROH6A6NGR9 719 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 DIAPH1O60610 1272 aaKnown RBP5.08□□□□□ -1.6
CAST-242ENST00000515063 EFCAB14O75071 495 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 LRG1P02750 347 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 CYP1A1P04798 512 aaPredicted RBP5.08□□□□□ -1.6
CAST-242ENST00000515063 CHGBP05060 677 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 ST5P78524 1137 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 ADAM9Q13443 819 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 TUSC3Q13454 348 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 PAN2Q504Q3 1202 aaKnown RBP5.08□□□□□ -1.6
CAST-242ENST00000515063 FAM47CQ5HY64 1035 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 HABP4Q5JVS0 413 aaKnown RBP5.08□□□□□ -1.6
CAST-242ENST00000515063 PRR31Q5SQ13 230 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 KCTD1Q719H9 257 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 PLEKHH3Q7Z736 793 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 LGI4Q8N135 537 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 ZSWIM2Q8NEG5 633 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 IPPKQ9H8X2 491 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 DLL4Q9NR61 685 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 FTSJ1Q9UET6 329 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 TRAF6Q9Y4K3 522 aa5.08□□□□□ -1.6
CAST-242ENST00000515063 SHANK2Q9UPX8 1470 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 WNT9AO14904 365 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 ANP32CO43423 234 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 COL6A2P12110 1019 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 FAHP16930 419 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 ZNF28P17035 718 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 GUCY1A3Q02108 690 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 SURF1Q15526 300 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 NFE2L2Q16236 605 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 FAM209AQ5JX71 171 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 STK32CQ86UX6 486 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 PMFBP1Q8TBY8 1022 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 FBXW5Q969U6 566 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 MPHOSPH9Q99550 1183 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 BDH2Q9BUT1 245 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 TMEM168Q9H0V1 697 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 USP35Q9P2H5 1018 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 CROTQ9UKG9 612 aa5.07□□□□□ -1.6
CAST-242ENST00000515063 MRPS23Q9Y3D9 190 aaKnown RBP5.07□□□□□ -1.6
CAST-242ENST00000515063 ASXL2Q76L83 1435 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 ANKRD30BQ9BXX2 1392 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 KDM6BO15054 1643 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 KIF14Q15058 1648 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 DDX3XO00571 662 aaKnown RBP eCLIP5.06□□□□□ -1.6
CAST-242ENST00000515063 NKRFO15226 690 aaKnown RBP eCLIP5.06□□□□□ -1.6
CAST-242ENST00000515063 FBXO21O94952 628 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 ENO2P09104 434 aaPredicted RBP5.06□□□□□ -1.6
CAST-242ENST00000515063 FAM153BP0C7A2 387 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 CNR2P34972 360 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 GJA4P35212 333 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 EPHA5P54756 1037 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 PLP2Q04941 152 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 GRIN1Q05586 938 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 DDX10Q13206 875 aaKnown RBP5.06□□□□□ -1.6
CAST-242ENST00000515063 RTP5Q14D33 572 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 GPR19Q15760 415 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 CRY1Q16526 586 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 MCTP2Q6DN12 878 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 TMC5Q6UXY8 1006 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 TXNDC5Q8NBS9 432 aaKnown RBP5.06□□□□□ -1.6
CAST-242ENST00000515063 THAP3Q8WTV1 239 aaPredicted RBP5.06□□□□□ -1.6
CAST-242ENST00000515063 BORCS6Q96GS4 357 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 EXOC2Q96KP1 924 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 ZSWIM3Q96MP5 696 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 BARX1Q9HBU1 254 aaPredicted RBP5.06□□□□□ -1.6
CAST-242ENST00000515063 CATSPERZQ9NTU4 200 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 ARHGEF5Q12774 1597 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 KDM5DQ9BY66 1539 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 GPATCH8Q9UKJ3 1502 aaKnown RBP5.06□□□□□ -1.6
CAST-242ENST00000515063 CAMSAP2Q08AD1 1489 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 CDC42BPAQ5VT25 1732 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 NCOA1Q15788 1441 aa5.06□□□□□ -1.6
CAST-242ENST00000515063 KRTAP9-7A8MTY7 169 aa5.05□□□□□ -1.6
CAST-242ENST00000515063 K7ESM1 405 aa5.05□□□□□ -1.6
CAST-242ENST00000515063 ARVCFO00192 962 aa5.05□□□□□ -1.6
CAST-242ENST00000515063 C6orf222P0C671 652 aaPredicted RBP5.05□□□□□ -1.6
CAST-242ENST00000515063 IL13P35225 146 aa5.05□□□□□ -1.6
CAST-242ENST00000515063 FIGNQ5HY92 759 aa5.05□□□□□ -1.6
CAST-242ENST00000515063 TRMT10BQ6PF06 316 aaKnown RBP5.05□□□□□ -1.6
CAST-242ENST00000515063 C16orf59Q7L2K0 433 aa5.05□□□□□ -1.6
CAST-242ENST00000515063 ZC3H7AQ8IWR0 971 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms