RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 CRLF3Q8IUI8 442 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 PYROXD1Q8WU10 500 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 CHURC1Q8WUH1 139 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 ETNK1Q9HBU6 452 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 WARS2Q9UGM6 360 aaKnown RBP14.31□□□□□ -0.12
TCOF1-214ENST00000515035 ZBTB1Q9Y2K1 713 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 SRPRBQ9Y5M8 271 aaKnown RBP14.31□□□□□ -0.12
TCOF1-214ENST00000515035 PRR36Q9H6K5 1346 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 PRDM15P57071 1507 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-214ENST00000515035 UBE3CQ15386 1083 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 CCDC144BQ3MJ40 725 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 SPOPLQ6IQ16 392 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 PLA2G4DQ86XP0 818 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 LRRC47Q8N1G4 583 aaKnown RBP14.31□□□□□ -0.12
TCOF1-214ENST00000515035 TEKT3Q9BXF9 490 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 ZFP69BQ9UJL9 534 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 DBNLQ9UJU6 430 aaKnown RBP14.31□□□□□ -0.12
TCOF1-214ENST00000515035 MAP3K4Q9Y6R4 1608 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 hCG_2014768A0A024R1R8 64 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 USP27XA6NNY8 438 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 PODXLO00592 558 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 GSTA4O15217 222 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 TTI1O43156 1089 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 C1orf146Q5VVC0 180 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 MYLK4Q86YV6 388 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-214ENST00000515035 NUDCD3Q8IVD9 361 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 WDR75Q8IWA0 830 aaKnown RBP14.31□□□□□ -0.12
TCOF1-214ENST00000515035 SEPT12Q8IYM1 358 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 TTC17Q96AE7 1141 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 PAGE5Q96GU1 130 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 MED10Q9BTT4 135 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 MRPL47Q9HD33 250 aaKnown RBP14.31□□□□□ -0.12
TCOF1-214ENST00000515035 GINM1Q9NU53 330 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 SYNJ2BP-COX16A0A087WUM0 186 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 PALM3A6NDB9 673 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-214ENST00000515035 RASSF10A6NK89 507 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 CACNB1Q02641 598 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-214ENST00000515035 ARHGAP18Q8N392 663 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 DNAAF3Q8N9W5 541 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 ATP6V1E2Q96A05 226 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 POLR3CQ9BUI4 534 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-214ENST00000515035 OSBPL5Q9H0X9 879 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-214ENST00000515035 COX16Q9P0S2 106 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 PCDHA4Q9UN74 947 aa14.31□□□□□ -0.12
TCOF1-214ENST00000515035 XDHP47989 1333 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 SPATA31A3Q5VYP0 1347 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 CFAP73A6NFT4 308 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 RASA4BC9J798 803 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 RASA4O43374 803 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 TMPRSS15P98073 1019 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 PRPSAP1Q14558 356 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 LRRC37BQ96QE4 947 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.3□□□□□ -0.12
TCOF1-214ENST00000515035 DISC1Q9NRI5 854 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 IRAK4Q9NWZ3 460 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 LEMD3Q9Y2U8 911 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 HNRNPDLO14979 420 aaKnown RBP14.3□□□□□ -0.12
TCOF1-214ENST00000515035 HNRNPCP07910 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
TCOF1-214ENST00000515035 RAD23BP54727 409 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 CHRNDQ07001 517 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 SLC12A1Q13621 1099 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 SCHIP1Q9P0W5 487 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-214ENST00000515035 MID2Q9UJV3 735 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 KIF1BO60333 1816 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 GOLGA8SH3BPF8 625 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 CLIC2O15247 247 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 SERPINB2P05120 415 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 KPNA2P52292 529 aaKnown RBP14.3□□□□□ -0.12
TCOF1-214ENST00000515035 LRRC24Q50LG9 513 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 ZBTB22O15209 634 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 HAUS5O94927 633 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 GYG1P46976 350 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 DARS2Q6PI48 645 aaKnown RBP14.3□□□□□ -0.12
TCOF1-214ENST00000515035 COPRSQ9NQ92 184 aa14.3□□□□□ -0.12
TCOF1-214ENST00000515035 SEMA3EO15041 775 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 PALMO75781 387 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 POLR2MP0CAP2 368 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 HSPA8P11142 646 aaKnown RBP14.29□□□□□ -0.12
TCOF1-214ENST00000515035 FBXO11Q86XK2 927 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 SRRM1Q8IYB3 904 aaKnown RBP14.29□□□□□ -0.12
TCOF1-214ENST00000515035 OLFM3Q96PB7 478 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 CALN1Q9BXU9 219 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 ABHD10Q9NUJ1 306 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 TLR7Q9NYK1 1049 aaKnown RBP14.29□□□□□ -0.12
TCOF1-214ENST00000515035 CAPN11Q9UMQ6 739 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 ZNF804BA4D1E1 1349 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 TMEM232C9JQI7 657 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 PCP11498 1178 aaKnown RBP14.29□□□□□ -0.12
TCOF1-214ENST00000515035 GAP43P17677 238 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 RWDD2BP57060 319 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 DNAJC5Q9H3Z4 198 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 SMYD3Q9H7B4 428 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 ZNF711Q9Y462 761 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 ARHGAP10A1A4S6 786 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 PPEF1O14829 653 aaPredicted RBP14.29□□□□□ -0.12
TCOF1-214ENST00000515035 BBOX1O75936 387 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 SLC5A4Q9NY91 659 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 ANGPTL3Q9Y5C1 460 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 PCDHB6Q9Y5E3 794 aa14.29□□□□□ -0.12
TCOF1-214ENST00000515035 LRRIQ4A6NIV6 560 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms