RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 DPYDQ12882 1025 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 LRP8Q14114 963 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 ZNF174Q15697 407 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 TTC38Q5R3I4 469 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 PRR5LQ6MZQ0 368 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 MLKLQ8NB16 471 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 FERMT2Q96AC1 680 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 DHX58Q96C10 678 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 PAGE5Q96GU1 130 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 RTFDC1Q9BY42 306 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 SLC5A4Q9NY91 659 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 MAD2L2Q9UI95 211 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 LEMD3Q9Y2U8 911 aa8.17□□□□□ -1.1
PDLIM5-219ENST00000514743 XDHP47989 1333 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 TSPY2A6NKD2 308 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 FANCGO15287 622 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 KDM1AO60341 852 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 PFDN1O60925 122 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 PHACTR2O75167 634 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 SERPINC1P01008 464 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 SSBP05455 408 aaKnown RBP eCLIP8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 RRM1P23921 792 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 HALP42357 657 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 OXCT1P55809 520 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 WHAMMP3Q1A5X7 153 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 CRY2Q49AN0 593 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 CCDC40Q4G0X9 1142 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 PPP1R15BQ5SWA1 713 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 DPY19L2Q6NUT2 758 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 LLGL2Q6P1M3 1020 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 FAM196AQ6ZSG2 479 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 SPATS2Q86XZ4 545 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 C4orf32Q8N8J7 132 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 CERKQ8TCT0 537 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 QPCTLQ9NXS2 382 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 CARD8Q9Y2G2 431 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 TMED5Q9Y3A6 229 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 NFE2L3Q9Y4A8 694 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 TMEM110-MUSTN1A8MSY1 372 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 NDUFAB1O14561 156 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 ATP9BO43861 1147 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 EVI5O60447 810 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 LDHBP07195 334 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 RFC4P35249 363 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 PLCD1P51178 756 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 GPSM2P81274 684 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 TFAP4Q01664 338 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 PTGDRQ13258 359 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 CFAP100Q494V2 611 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 TRAPPC3LQ5T215 181 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 POTEEQ6S8J3 1075 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 HOMER1Q86YM7 354 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 SAMD14Q8IZD0 417 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 CHCHD4Q8N4Q1 142 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 PCDH18Q9HCL0 1135 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 ZNF304Q9HCX3 659 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 SAMSN1Q9NSI8 373 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 SIPA1L1O43166 1804 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 USP17L3A6NCW0 530 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 USP17L4A6NCW7 530 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 CYTH3O43739 400 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 HOXD12P35452 270 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 GRM4Q14833 912 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 LONRF2Q1L5Z9 754 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 KAZNQ674X7 775 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 PDXDC2PQ6P474 469 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 PIK3AP1Q6ZUJ8 805 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 RASGRP2Q7LDG7 609 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 USP17L1Q7RTZ2 530 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 DGKHQ86XP1 1220 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 CNBD1Q8NA66 436 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 SLC44A5Q8NCS7 719 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 WDR66Q8TBY9 1149 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 FAM204AQ9H8W3 233 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 TIMM22Q9Y584 194 aa8.16□□□□□ -1.1
PDLIM5-219ENST00000514743 SPATA31A6Q5VVP1 1343 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 CCDC194A0A1B0GVG4 234 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 LINGO3P0C6S8 592 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 CNGA1P29973 690 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 CDC25CP30307 473 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 MLH1P40692 756 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 CTCFP49711 727 aaPredicted RBP8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 SMTNP53814 917 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 LONRF1Q17RB8 773 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 CFAP58Q5T655 872 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 LMBRD2Q68DH5 695 aaPredicted RBP8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 PNMA1Q8ND90 353 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 GPKOWQ92917 476 aaPredicted RBP eCLIP8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 VCX3BQ9H321 246 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 TCP11L1Q9NUJ3 509 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 MYH4Q9Y623 1939 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 VWA3AA6NCI4 1184 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 PPP1R3GB7ZBB8 358 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 SUPT3HO75486 399 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 BMP15O95972 392 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 CCDC159P0C7I6 412 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 TRAPPC10P48553 1259 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 GUCY2FP51841 1108 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 ZNF713Q8N859 430 aaPredicted RBP8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 AFAP1L1Q8TED9 768 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms