RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 KRT76Q01546 638 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 ZNF746Q6NUN9 644 aaPredicted RBP9.39□□□□□ -0.91
CCL28-204ENST00000514421 MIS18BP1Q6P0N0 1132 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 ABHD15Q6UXT9 468 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 PLPPR4Q7Z2D5 763 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 GAS2L3Q86XJ1 694 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 GLG1Q92896 1179 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 SLC5A5Q92911 643 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 FAM20AQ96MK3 541 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 UIMC1Q96RL1 719 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 LBHD1Q9BQE6 289 aaPredicted RBP9.39□□□□□ -0.91
CCL28-204ENST00000514421 GZF1Q9H116 711 aaPredicted RBP9.39□□□□□ -0.91
CCL28-204ENST00000514421 AZI2Q9H6S1 392 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 TRMT13Q9NUP7 481 aaKnown RBP9.39□□□□□ -0.91
CCL28-204ENST00000514421 TMEM63CQ9P1W3 806 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 HDAC6Q9UBN7 1215 aa9.39□□□□□ -0.91
CCL28-204ENST00000514421 DDX25Q9UHL0 483 aaKnown RBP9.39□□□□□ -0.91
CCL28-204ENST00000514421 ZNF215Q9UL58 517 aaPredicted RBP9.39□□□□□ -0.91
CCL28-204ENST00000514421 IGKV6D-21A0A0A0MT36 114 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 DDX39AO00148 427 aaKnown RBP9.38□□□□□ -0.91
CCL28-204ENST00000514421 TBX3O15119 743 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 MARCH6O60337 910 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 B4GALT4O60513 344 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 GADD45BO75293 160 aaPredicted RBP9.38□□□□□ -0.91
CCL28-204ENST00000514421 CCNE2O96020 404 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 BMP8BP34820 402 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 GNL2Q13823 731 aaKnown RBP9.38□□□□□ -0.91
CCL28-204ENST00000514421 PTGISQ16647 500 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 SWSAP1Q6NVH7 229 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 CAVIN1Q6NZI2 390 aaKnown RBP9.38□□□□□ -0.91
CCL28-204ENST00000514421 SMAP1Q8IYB5 467 aaPredicted RBP9.38□□□□□ -0.91
CCL28-204ENST00000514421 PPP1R13LQ8WUF5 828 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 SYAP1Q96A49 352 aaPredicted RBP9.38□□□□□ -0.91
CCL28-204ENST00000514421 PCYT2Q99447 389 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 GDF15Q99988 308 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 TEKT3Q9BXF9 490 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 RNPEPQ9H4A4 650 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 ERAP1Q9NZ08 941 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 GTF2IRD1Q9UHL9 959 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 TCEAL9Q9UHQ7 104 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 CFAP45Q9UL16 551 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 TBX21Q9UL17 535 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 NOD1Q9Y239 953 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 PCDHA10Q9Y5I2 948 aa9.38□□□□□ -0.91
CCL28-204ENST00000514421 C17orf102A2RUQ5 167 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 FAM205CA6NFA0 338 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 H3BQV1 296 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 BACH1O14867 736 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 GAS7O60861 476 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 PSMD10O75832 226 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 LETM1O95202 739 aaPredicted RBP9.37□□□□□ -0.91
CCL28-204ENST00000514421 PSAPP07602 524 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 SMIM10L2AP0DMW4 78 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 SMIM10L2BP0DMW5 78 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 GNAT1P11488 350 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 CYP2C9P11712 490 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 XRCC6P12956 609 aaKnown RBP eCLIP9.37□□□□□ -0.91
CCL28-204ENST00000514421 NCLP19338 710 aaKnown RBP9.37□□□□□ -0.91
CCL28-204ENST00000514421 ATP2B1P20020 1258 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 ITGB8P26012 769 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 U2AF2P26368 475 aaKnown RBP eCLIP9.37□□□□□ -0.91
CCL28-204ENST00000514421 SFNP31947 248 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 MAGEA10P43363 369 aaPredicted RBP9.37□□□□□ -0.91
CCL28-204ENST00000514421 SLC26A2P50443 739 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 MDM2Q00987 491 aaPredicted RBP9.37□□□□□ -0.91
CCL28-204ENST00000514421 BFSP2Q13515 415 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 LRCH2Q5VUJ6 765 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 FAM160B1Q5W0V3 765 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 GDF6Q6KF10 455 aaPredicted RBP9.37□□□□□ -0.91
CCL28-204ENST00000514421 MFSD5Q6N075 450 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 BRAPQ7Z569 592 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 NOSTRINQ8IVI9 506 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 RETREG2Q8NC44 543 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 ETNPPLQ8TBG4 499 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 AFAP1L1Q8TED9 768 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 LEO1Q8WVC0 666 aaPredicted RBP9.37□□□□□ -0.91
CCL28-204ENST00000514421 BADQ92934 168 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 KCNMB3Q9NPA1 279 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 ZNF302Q9NR11 478 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 DISC1Q9NRI5 854 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 RCOR1Q9UKL0 485 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 KIAA1217Q5T5P2 1943 aa9.37□□□□□ -0.91
CCL28-204ENST00000514421 EMSYQ7Z589 1322 aa9.36□□□□□ -0.91
CCL28-204ENST00000514421 NRCAMQ92823 1304 aa9.36□□□□□ -0.91
CCL28-204ENST00000514421 DNAH12Q6ZR08 3092 aa9.36□□□□□ -0.91
CCL28-204ENST00000514421 RRN3P2A6NIE6 340 aa9.36□□□□□ -0.91
CCL28-204ENST00000514421 WDR64B1ANS9 1081 aa9.36□□□□□ -0.91
CCL28-204ENST00000514421 TNRC18O15417 2968 aaPredicted RBP9.36□□□□□ -0.91
CCL28-204ENST00000514421 SLC37A4O43826 429 aa9.36□□□□□ -0.91
CCL28-204ENST00000514421 HOXC8P31273 242 aa9.36□□□□□ -0.91
CCL28-204ENST00000514421 TRAPPC10P48553 1259 aa9.36□□□□□ -0.91
CCL28-204ENST00000514421 JAK3P52333 1124 aa9.36□□□□□ -0.91
CCL28-204ENST00000514421 ZNF200P98182 395 aaPredicted RBP9.36□□□□□ -0.91
CCL28-204ENST00000514421 PTK7Q13308 1070 aa9.36□□□□□ -0.91
CCL28-204ENST00000514421 LRSAM1Q6UWE0 723 aa9.36□□□□□ -0.91
CCL28-204ENST00000514421 B3GNT9Q6UX72 402 aa9.36□□□□□ -0.91
CCL28-204ENST00000514421 TRIM50Q86XT4 487 aa9.36□□□□□ -0.91
CCL28-204ENST00000514421 SLFN12Q8IYM2 578 aa9.36□□□□□ -0.91
CCL28-204ENST00000514421 TMEM199Q8N511 208 aa9.36□□□□□ -0.91
CCL28-204ENST00000514421 RDM1Q8NG50 284 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms