RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 OTUD7AQ8TE49 926 aaPredicted RBP13.96□□□□□ -0.17
PTPN20-229ENST00000513756 NKD2Q969F2 451 aaPredicted RBP13.96□□□□□ -0.17
PTPN20-229ENST00000513756 BCAS3Q9H6U6 928 aa13.96□□□□□ -0.17
PTPN20-229ENST00000513756 AAASQ9NRG9 546 aa13.96□□□□□ -0.17
PTPN20-229ENST00000513756 WDR87Q6ZQQ6 2873 aa13.96□□□□□ -0.18
PTPN20-229ENST00000513756 DCHS1Q96JQ0 3298 aa13.95□□□□□ -0.18
PTPN20-229ENST00000513756 NEDD4P46934 1319 aa13.95□□□□□ -0.18
PTPN20-229ENST00000513756 SPATA31C2B4DYI2 1134 aa13.95□□□□□ -0.18
PTPN20-229ENST00000513756 ZNF213O14771 459 aa13.95□□□□□ -0.18
PTPN20-229ENST00000513756 PER2O15055 1255 aa13.95□□□□□ -0.18
PTPN20-229ENST00000513756 ZBTB5O15062 677 aa13.95□□□□□ -0.18
PTPN20-229ENST00000513756 FIBPO43427 364 aa13.95□□□□□ -0.18
PTPN20-229ENST00000513756 PDGFBP01127 241 aaPredicted RBP13.95□□□□□ -0.18
PTPN20-229ENST00000513756 MFAP1P55081 439 aaKnown RBP13.95□□□□□ -0.18
PTPN20-229ENST00000513756 MTMR3Q13615 1198 aa13.95□□□□□ -0.18
PTPN20-229ENST00000513756 DUSP6Q16828 381 aa13.95□□□□□ -0.18
PTPN20-229ENST00000513756 PAN2Q504Q3 1202 aaKnown RBP13.95□□□□□ -0.18
PTPN20-229ENST00000513756 FCHSD1Q86WN1 690 aa13.95□□□□□ -0.18
PTPN20-229ENST00000513756 ZFP91Q96JP5 570 aaPredicted RBP13.95□□□□□ -0.18
PTPN20-229ENST00000513756 FAM227BQ96M60 508 aa13.95□□□□□ -0.18
PTPN20-229ENST00000513756 ZSCAN10Q96SZ4 725 aaPredicted RBP13.95□□□□□ -0.18
PTPN20-229ENST00000513756 RNF216Q9NWF9 866 aaPredicted RBP13.95□□□□□ -0.18
PTPN20-229ENST00000513756 ZBTB47Q9UFB7 747 aaPredicted RBP13.95□□□□□ -0.18
PTPN20-229ENST00000513756 LRFN2Q9ULH4 789 aa13.95□□□□□ -0.18
PTPN20-229ENST00000513756 CDY2AQ9Y6F7 541 aa13.95□□□□□ -0.18
PTPN20-229ENST00000513756 SQORQ9Y6N5 450 aa13.95□□□□□ -0.18
PTPN20-229ENST00000513756 A0A0D9SFI3 127 aa13.94□□□□□ -0.18
PTPN20-229ENST00000513756 PPFIA3O75145 1194 aa13.94□□□□□ -0.18
PTPN20-229ENST00000513756 SCG2P13521 617 aa13.94□□□□□ -0.18
PTPN20-229ENST00000513756 CD52P31358 61 aa13.94□□□□□ -0.18
PTPN20-229ENST00000513756 PPFIA1Q13136 1202 aa13.94□□□□□ -0.18
PTPN20-229ENST00000513756 SPOUT1Q5T280 376 aaKnown RBP13.94□□□□□ -0.18
PTPN20-229ENST00000513756 IER5Q5VY09 327 aa13.94□□□□□ -0.18
PTPN20-229ENST00000513756 TMEM184AQ6ZMB5 413 aa13.94□□□□□ -0.18
PTPN20-229ENST00000513756 CRIPAKQ8N1N5 446 aa13.94□□□□□ -0.18
PTPN20-229ENST00000513756 KREMEN2Q8NCW0 462 aa13.94□□□□□ -0.18
PTPN20-229ENST00000513756 GIMAP8Q8ND71 665 aaPredicted RBP13.94□□□□□ -0.18
PTPN20-229ENST00000513756 DNAJB3Q8WWF6 145 aa13.94□□□□□ -0.18
PTPN20-229ENST00000513756 MTMR8Q96EF0 704 aa13.94□□□□□ -0.18
PTPN20-229ENST00000513756 INPP4AQ96PE3 977 aaPredicted RBP13.94□□□□□ -0.18
PTPN20-229ENST00000513756 SENP7Q9BQF6 1050 aa13.94□□□□□ -0.18
PTPN20-229ENST00000513756 TUBE1Q9UJT0 475 aa13.94□□□□□ -0.18
PTPN20-229ENST00000513756 SORCS3Q9UPU3 1222 aa13.94□□□□□ -0.18
PTPN20-229ENST00000513756 SUPT16HQ9Y5B9 1047 aaKnown RBP13.94□□□□□ -0.18
PTPN20-229ENST00000513756 KIAA1671Q9BY89 1806 aa13.94□□□□□ -0.18
PTPN20-229ENST00000513756 KLRF2D3W0D1 207 aa13.93□□□□□ -0.18
PTPN20-229ENST00000513756 M0QZ92 97 aa13.93□□□□□ -0.18
PTPN20-229ENST00000513756 HOXB8P17481 243 aaPredicted RBP13.93□□□□□ -0.18
PTPN20-229ENST00000513756 TECP42680 631 aa13.93□□□□□ -0.18
PTPN20-229ENST00000513756 MRPS6P82932 125 aaKnown RBP13.93□□□□□ -0.18
PTPN20-229ENST00000513756 GRIK4Q16099 956 aa13.93□□□□□ -0.18
PTPN20-229ENST00000513756 ASTLQ6HA08 431 aaPredicted RBP13.93□□□□□ -0.18
PTPN20-229ENST00000513756 ANKRD54Q6NXT1 300 aa13.93□□□□□ -0.18
PTPN20-229ENST00000513756 FAM43BQ6ZT52 329 aaPredicted RBP13.93□□□□□ -0.18
PTPN20-229ENST00000513756 ADSSL1Q8N142 457 aa13.93□□□□□ -0.18
PTPN20-229ENST00000513756 ENAHQ8N8S7 591 aaPredicted RBP13.93□□□□□ -0.18
PTPN20-229ENST00000513756 LINC01599Q8WXQ3 324 aa13.93□□□□□ -0.18
PTPN20-229ENST00000513756 S1PR5Q9H228 398 aa13.93□□□□□ -0.18
PTPN20-229ENST00000513756 AGO3Q9H9G7 860 aaKnown RBP13.93□□□□□ -0.18
PTPN20-229ENST00000513756 PCDHGC5Q9Y5F6 944 aa13.93□□□□□ -0.18
PTPN20-229ENST00000513756 MBLAC1A4D2B0 266 aaPredicted RBP13.92□□□□□ -0.18
PTPN20-229ENST00000513756 PPP1R11O60927 126 aaPredicted RBP13.92□□□□□ -0.18
PTPN20-229ENST00000513756 MRPS9P82933 396 aaKnown RBP13.92□□□□□ -0.18
PTPN20-229ENST00000513756 SP4Q02446 784 aa13.92□□□□□ -0.18
PTPN20-229ENST00000513756 SEMA3FQ13275 785 aa13.92□□□□□ -0.18
PTPN20-229ENST00000513756 C20orf194Q5TEA3 1177 aa13.92□□□□□ -0.18
PTPN20-229ENST00000513756 FRMD5Q7Z6J6 570 aa13.92□□□□□ -0.18
PTPN20-229ENST00000513756 RTN4RL1Q86UN2 441 aaPredicted RBP13.92□□□□□ -0.18
PTPN20-229ENST00000513756 ZNF589Q86UQ0 364 aaPredicted RBP13.92□□□□□ -0.18
PTPN20-229ENST00000513756 STAG2Q8N3U4 1231 aa13.92□□□□□ -0.18
PTPN20-229ENST00000513756 TMEM105Q8N8V8 129 aa13.92□□□□□ -0.18
PTPN20-229ENST00000513756 VN1R2Q8NFZ6 395 aa13.92□□□□□ -0.18
PTPN20-229ENST00000513756 RASGRP4Q8TDF6 673 aa13.92□□□□□ -0.18
PTPN20-229ENST00000513756 MFSD1Q9H3U5 465 aa13.92□□□□□ -0.18
PTPN20-229ENST00000513756 TSHZ2Q9NRE2 1034 aa13.92□□□□□ -0.18
PTPN20-229ENST00000513756 ERAP1Q9NZ08 941 aa13.92□□□□□ -0.18
PTPN20-229ENST00000513756 RTEL1Q9NZ71 1219 aa13.92□□□□□ -0.18
PTPN20-229ENST00000513756 RCAN3Q9UKA8 241 aa13.92□□□□□ -0.18
PTPN20-229ENST00000513756 PCDHB7Q9Y5E2 793 aa13.92□□□□□ -0.18
PTPN20-229ENST00000513756 FRMPD4Q14CM0 1322 aa13.91□□□□□ -0.18
PTPN20-229ENST00000513756 PLXNA4Q9HCM2 1894 aa13.91□□□□□ -0.18
PTPN20-229ENST00000513756 RRN3P2A6NIE6 340 aa13.91□□□□□ -0.18
PTPN20-229ENST00000513756 B4E1Z4 1266 aa13.91□□□□□ -0.18
PTPN20-229ENST00000513756 FGF18O76093 207 aa13.91□□□□□ -0.18
PTPN20-229ENST00000513756 TCF7P36402 384 aaPredicted RBP13.91□□□□□ -0.18
PTPN20-229ENST00000513756 RBM10P98175 930 aaKnown RBP13.91□□□□□ -0.18
PTPN20-229ENST00000513756 PAK2Q13177 524 aa13.91□□□□□ -0.18
PTPN20-229ENST00000513756 NMIQ13287 307 aaPredicted RBP13.91□□□□□ -0.18
PTPN20-229ENST00000513756 IFIT1BQ5T764 474 aaKnown RBP13.91□□□□□ -0.18
PTPN20-229ENST00000513756 XRRA1Q6P2D8 792 aa13.91□□□□□ -0.18
PTPN20-229ENST00000513756 NLRX1Q86UT6 975 aa13.91□□□□□ -0.18
PTPN20-229ENST00000513756 THNSL1Q8IYQ7 743 aa13.91□□□□□ -0.18
PTPN20-229ENST00000513756 TNPO1Q92973 898 aaKnown RBP13.91□□□□□ -0.18
PTPN20-229ENST00000513756 NECTIN4Q96NY8 510 aa13.91□□□□□ -0.18
PTPN20-229ENST00000513756 UBAC1Q9BSL1 405 aa13.91□□□□□ -0.18
PTPN20-229ENST00000513756 TMEM260Q9NX78 707 aa13.91□□□□□ -0.18
PTPN20-229ENST00000513756 ZSWIM5Q9P217 1185 aa13.91□□□□□ -0.18
PTPN20-229ENST00000513756 PADI3Q9ULW8 664 aa13.91□□□□□ -0.18
PTPN20-229ENST00000513756 TRPV2Q9Y5S1 764 aa13.91□□□□□ -0.18
PTPN20-229ENST00000513756 SALL3Q9BXA9 1300 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms