RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 TMC2Q8TDI7 906 aa10.46□□□□□ -0.74
CAST-239ENST00000513666 MRPL42Q9Y6G3 142 aaKnown RBP10.46□□□□□ -0.74
CAST-239ENST00000513666 PCP11498 1178 aaKnown RBP10.45□□□□□ -0.74
CAST-239ENST00000513666 NBL1P41271 181 aa10.45□□□□□ -0.74
CAST-239ENST00000513666 PGM5Q15124 567 aa10.45□□□□□ -0.74
CAST-239ENST00000513666 ARSIQ5FYB1 569 aa10.45□□□□□ -0.74
CAST-239ENST00000513666 STOX1Q6ZVD7 989 aa10.45□□□□□ -0.74
CAST-239ENST00000513666 DGKHQ86XP1 1220 aa10.45□□□□□ -0.74
CAST-239ENST00000513666 CMTR2Q8IYT2 770 aaKnown RBP10.45□□□□□ -0.74
CAST-239ENST00000513666 PNMA1Q8ND90 353 aa10.45□□□□□ -0.74
CAST-239ENST00000513666 IL31RAQ8NI17 732 aa10.45□□□□□ -0.74
CAST-239ENST00000513666 SUSD6Q92537 303 aa10.45□□□□□ -0.74
CAST-239ENST00000513666 GPKOWQ92917 476 aaPredicted RBP eCLIP10.45□□□□□ -0.74
CAST-239ENST00000513666 RIPOR3Q96MK2 946 aa10.45□□□□□ -0.74
CAST-239ENST00000513666 USP26Q9BXU7 913 aa10.45□□□□□ -0.74
CAST-239ENST00000513666 MAP3K20Q9NYL2 800 aaKnown RBP10.45□□□□□ -0.74
CAST-239ENST00000513666 ZMYM6O95789 1325 aa10.45□□□□□ -0.74
CAST-239ENST00000513666 GVINP1Q7Z2Y8 2422 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 KAT6AQ92794 2004 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 KDM4AO75164 1064 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 PDGFBP01127 241 aaPredicted RBP10.44□□□□□ -0.74
CAST-239ENST00000513666 ARHGAP4P98171 946 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 MGAT3Q09327 533 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 MMRN1Q13201 1228 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 LPIN1Q14693 890 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 ASPRV1Q53RT3 343 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 MFSD6Q6ZSS7 791 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 RBM23Q86U06 439 aaKnown RBP10.44□□□□□ -0.74
CAST-239ENST00000513666 KLHL23Q8NBE8 558 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 ATP8B4Q8TF62 1192 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 LMBR1Q8WVP7 490 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 POF1BQ8WVV4 589 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 BCAS3Q9H6U6 928 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 JMJD4Q9H9V9 463 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 HELLSQ9NRZ9 838 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 PLXNA4Q9HCM2 1894 aa10.44□□□□□ -0.74
CAST-239ENST00000513666 NOP56O00567 594 aaKnown RBP10.43□□□□□ -0.74
CAST-239ENST00000513666 DHX16O60231 1041 aaKnown RBP10.43□□□□□ -0.74
CAST-239ENST00000513666 CCND2P30279 289 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 ID4P47928 161 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 HAND2P61296 217 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 VARS2Q5ST30 1063 aaKnown RBP10.43□□□□□ -0.74
CAST-239ENST00000513666 TBC1D10CQ8IV04 446 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 CRIPAKQ8N1N5 446 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 SAMD3Q8N6K7 520 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 OTUD7AQ8TE49 926 aaPredicted RBP10.43□□□□□ -0.74
CAST-239ENST00000513666 GPR20Q99678 358 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 ZKSCAN3Q9BRR0 538 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 AMNQ9BXJ7 453 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 TLE6Q9H808 572 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 VAT1LQ9HCJ6 419 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 RYDENQ9NUL5 291 aaKnown RBP10.43□□□□□ -0.74
CAST-239ENST00000513666 ZNF215Q9UL58 517 aaPredicted RBP10.43□□□□□ -0.74
CAST-239ENST00000513666 SUPT16HQ9Y5B9 1047 aaKnown RBP10.43□□□□□ -0.74
CAST-239ENST00000513666 MYO15AQ9UKN7 3530 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 DOCK5Q9H7D0 1870 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 NRCAMQ92823 1304 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 FSD2A1L4K1 749 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 HOXA13P31271 388 aaPredicted RBP10.43□□□□□ -0.74
CAST-239ENST00000513666 NEDD9Q14511 834 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 CCDC178Q5BJE1 867 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 FBXO47Q5MNV8 452 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 TAF2Q6P1X5 1199 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 METTL7BQ6UX53 244 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 RUFY4Q6ZNE9 571 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 TSHZ1Q6ZSZ6 1077 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 ZBTB33Q86T24 672 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 TRIM50Q86XT4 487 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 NPAS4Q8IUM7 802 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 ZNF687Q8N1G0 1237 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 LINC01599Q8WXQ3 324 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 ESR2Q92731 530 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 RNF41Q9H4P4 317 aaPredicted RBP10.43□□□□□ -0.74
CAST-239ENST00000513666 KAT14Q9H8E8 782 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 PCDHGC5Q9Y5F6 944 aa10.43□□□□□ -0.74
CAST-239ENST00000513666 DCHS1Q96JQ0 3298 aa10.42□□□□□ -0.74
CAST-239ENST00000513666 NEDD4P46934 1319 aa10.42□□□□□ -0.74
CAST-239ENST00000513666 PARP1P09874 1014 aaKnown RBP10.42□□□□□ -0.74
CAST-239ENST00000513666 MX1P20591 662 aa10.42□□□□□ -0.74
CAST-239ENST00000513666 RBM10P98175 930 aaKnown RBP10.42□□□□□ -0.74
CAST-239ENST00000513666 MCMDC2Q4G0Z9 681 aa10.42□□□□□ -0.74
CAST-239ENST00000513666 CYFIP1Q7L576 1253 aa10.42□□□□□ -0.74
CAST-239ENST00000513666 RSPH3Q86UC2 560 aa10.42□□□□□ -0.74
CAST-239ENST00000513666 VN1R2Q8NFZ6 395 aa10.42□□□□□ -0.74
CAST-239ENST00000513666 NEK1Q96PY6 1258 aa10.42□□□□□ -0.74
CAST-239ENST00000513666 CDCA3Q99618 268 aaPredicted RBP10.42□□□□□ -0.74
CAST-239ENST00000513666 ZNF292O60281 2723 aa10.41□□□□□ -0.74
CAST-239ENST00000513666 WDR87Q6ZQQ6 2873 aa10.41□□□□□ -0.74
CAST-239ENST00000513666 VPS13AQ96RL7 3174 aa10.41□□□□□ -0.74
CAST-239ENST00000513666 A0A0D9SFI3 127 aa10.41□□□□□ -0.74
CAST-239ENST00000513666 SPATA31C2B4DYI2 1134 aa10.41□□□□□ -0.74
CAST-239ENST00000513666 PER2O15055 1255 aa10.41□□□□□ -0.74
CAST-239ENST00000513666 PPP1R11O60927 126 aaPredicted RBP10.41□□□□□ -0.74
CAST-239ENST00000513666 STAG3L1P0CL83 205 aa10.41□□□□□ -0.74
CAST-239ENST00000513666 NT5C2P49902 561 aa10.41□□□□□ -0.74
CAST-239ENST00000513666 UBE3AQ05086 875 aa10.41□□□□□ -0.74
CAST-239ENST00000513666 DUSP6Q16828 381 aa10.41□□□□□ -0.74
CAST-239ENST00000513666 GNPTABQ3T906 1256 aa10.41□□□□□ -0.74
CAST-239ENST00000513666 PAN2Q504Q3 1202 aaKnown RBP10.41□□□□□ -0.74
CAST-239ENST00000513666 UTP14CQ5TAP6 766 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms