RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 NBL1P41271 181 aa12.67□□□□□ -0.38
DDX41-216ENST00000513562 RBM10P98175 930 aaKnown RBP12.67□□□□□ -0.38
DDX41-216ENST00000513562 ERMP1Q7Z2K6 904 aa12.67□□□□□ -0.38
DDX41-216ENST00000513562 RIPOR3Q96MK2 946 aa12.67□□□□□ -0.38
DDX41-216ENST00000513562 CDCA3Q99618 268 aaPredicted RBP12.67□□□□□ -0.38
DDX41-216ENST00000513562 SENP7Q9BQF6 1050 aa12.67□□□□□ -0.38
DDX41-216ENST00000513562 FTHL17Q9BXU8 183 aa12.67□□□□□ -0.38
DDX41-216ENST00000513562 TLE6Q9H808 572 aa12.67□□□□□ -0.38
DDX41-216ENST00000513562 AGO3Q9H9G7 860 aaKnown RBP12.67□□□□□ -0.38
DDX41-216ENST00000513562 TUBE1Q9UJT0 475 aa12.67□□□□□ -0.38
DDX41-216ENST00000513562 PCDHB15Q9Y5E8 787 aa12.67□□□□□ -0.38
DDX41-216ENST00000513562 CDY2AQ9Y6F7 541 aa12.67□□□□□ -0.38
DDX41-216ENST00000513562 ZDBF2Q9HCK1 2354 aa12.67□□□□□ -0.38
DDX41-216ENST00000513562 CACNA1HO95180 2353 aa12.66□□□□□ -0.38
DDX41-216ENST00000513562 KLRF2D3W0D1 207 aa12.66□□□□□ -0.38
DDX41-216ENST00000513562 CD52P31358 61 aa12.66□□□□□ -0.38
DDX41-216ENST00000513562 PDE1AP54750 535 aa12.66□□□□□ -0.38
DDX41-216ENST00000513562 MFAP1P55081 439 aaKnown RBP12.66□□□□□ -0.38
DDX41-216ENST00000513562 UBE3AQ05086 875 aa12.66□□□□□ -0.38
DDX41-216ENST00000513562 TRAF1Q13077 416 aa12.66□□□□□ -0.38
DDX41-216ENST00000513562 PPFIA1Q13136 1202 aa12.66□□□□□ -0.38
DDX41-216ENST00000513562 SLC35G1Q2M3R5 365 aa12.66□□□□□ -0.38
DDX41-216ENST00000513562 PAN2Q504Q3 1202 aaKnown RBP12.66□□□□□ -0.38
DDX41-216ENST00000513562 RTN4RL1Q86UN2 441 aaPredicted RBP12.66□□□□□ -0.38
DDX41-216ENST00000513562 DNAJB3Q8WWF6 145 aa12.66□□□□□ -0.38
DDX41-216ENST00000513562 NEK1Q96PY6 1258 aa12.66□□□□□ -0.38
DDX41-216ENST00000513562 ZSWIM5Q9P217 1185 aa12.66□□□□□ -0.38
DDX41-216ENST00000513562 MAD2L2Q9UI95 211 aa12.66□□□□□ -0.38
DDX41-216ENST00000513562 SQORQ9Y6N5 450 aa12.66□□□□□ -0.38
DDX41-216ENST00000513562 MYO7AQ13402 2215 aa12.66□□□□□ -0.38
DDX41-216ENST00000513562 PALM3A6NDB9 673 aaPredicted RBP12.65□□□□□ -0.38
DDX41-216ENST00000513562 PER2O15055 1255 aa12.65□□□□□ -0.38
DDX41-216ENST00000513562 RPLP2P05387 115 aaKnown RBP12.65□□□□□ -0.38
DDX41-216ENST00000513562 STAG3L1P0CL83 205 aa12.65□□□□□ -0.38
DDX41-216ENST00000513562 MRPS6P82932 125 aaKnown RBP12.65□□□□□ -0.38
DDX41-216ENST00000513562 SP4Q02446 784 aa12.65□□□□□ -0.38
DDX41-216ENST00000513562 GRIK4Q16099 956 aa12.65□□□□□ -0.38
DDX41-216ENST00000513562 DUSP6Q16828 381 aa12.65□□□□□ -0.38
DDX41-216ENST00000513562 MARCH8Q5T0T0 291 aa12.65□□□□□ -0.38
DDX41-216ENST00000513562 TMEM184AQ6ZMB5 413 aa12.65□□□□□ -0.38
DDX41-216ENST00000513562 HOMER1Q86YM7 354 aa12.65□□□□□ -0.38
DDX41-216ENST00000513562 RTEL1Q9NZ71 1219 aa12.65□□□□□ -0.38
DDX41-216ENST00000513562 TRPC6Q9Y210 931 aa12.65□□□□□ -0.38
DDX41-216ENST00000513562 VPS13AQ96RL7 3174 aa12.65□□□□□ -0.38
DDX41-216ENST00000513562 SCG2P13521 617 aa12.64□□□□□ -0.39
DDX41-216ENST00000513562 TCF7P36402 384 aaPredicted RBP12.64□□□□□ -0.39
DDX41-216ENST00000513562 GATMP50440 423 aa12.64□□□□□ -0.39
DDX41-216ENST00000513562 KCNC3Q14003 757 aa12.64□□□□□ -0.39
DDX41-216ENST00000513562 IFIT1BQ5T764 474 aaKnown RBP12.64□□□□□ -0.39
DDX41-216ENST00000513562 MICAL1Q8TDZ2 1067 aa12.64□□□□□ -0.39
DDX41-216ENST00000513562 PIGSQ96S52 555 aa12.64□□□□□ -0.39
DDX41-216ENST00000513562 UBAC1Q9BSL1 405 aa12.64□□□□□ -0.39
DDX41-216ENST00000513562 S1PR5Q9H228 398 aa12.64□□□□□ -0.39
DDX41-216ENST00000513562 RIOX1Q9H6W3 641 aa12.64□□□□□ -0.39
DDX41-216ENST00000513562 ERAP1Q9NZ08 941 aa12.64□□□□□ -0.39
DDX41-216ENST00000513562 PADI3Q9ULW8 664 aa12.64□□□□□ -0.39
DDX41-216ENST00000513562 PLXNA3P51805 1871 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 FSCN2O14926 492 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 PPFIA3O75145 1194 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 MARK3P27448 753 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 MTMR3Q13615 1198 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 SEC23AQ15436 765 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 ANKRD45Q5TZF3 282 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 IER5Q5VY09 327 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 PCNX4Q63HM2 1172 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 ANKRD54Q6NXT1 300 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 XRRA1Q6P2D8 792 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 ZBTB33Q86T24 672 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 UBALD2Q8IYN6 164 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 TMEM105Q8N8V8 129 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 KREMEN2Q8NCW0 462 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 GIMAP8Q8ND71 665 aaPredicted RBP12.63□□□□□ -0.39
DDX41-216ENST00000513562 RASGRP4Q8TDF6 673 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 KRT23Q9C075 422 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
DDX41-216ENST00000513562 PCDHB12Q9Y5F1 795 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 TRPV2Q9Y5S1 764 aa12.63□□□□□ -0.39
DDX41-216ENST00000513562 IGSF9BQ9UPX0 1349 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 PNMA6FA0A0J9YX94 578 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 CYTH3O43739 400 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 FGF18O76093 207 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 SRGAP2BP0DMP2 458 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 KCNA2P16389 499 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 ERVFC1P60507 584 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 PAK2Q13177 524 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 PDE12Q6L8Q7 609 aaKnown RBP12.62□□□□□ -0.39
DDX41-216ENST00000513562 SYCE2Q6PIF2 218 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 SEPT1Q8WYJ6 367 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 ZBTB10Q96DT7 871 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 FAM49AQ9H0Q0 323 aaPredicted RBP12.62□□□□□ -0.39
DDX41-216ENST00000513562 TMX1Q9H3N1 280 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 CNNM2Q9H8M5 875 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 AAASQ9NRG9 546 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 LRFN2Q9ULH4 789 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 SORCS3Q9UPU3 1222 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 TTC3P53804 2025 aa12.62□□□□□ -0.39
DDX41-216ENST00000513562 CACNA1AO00555 2505 aa12.61□□□□□ -0.39
DDX41-216ENST00000513562 GSTTP1A0A1W2PQM5 241 aa12.61□□□□□ -0.39
DDX41-216ENST00000513562 ATP9AO75110 1047 aa12.61□□□□□ -0.39
DDX41-216ENST00000513562 BRD1O95696 1058 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms