RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 ELP1O95163 1332 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 TANC1Q9C0D5 1861 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 A6NJR5 290 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 KBTBD13C9JR72 458 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 DDX39AO00148 427 aaKnown RBP8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 DHX15O43143 795 aaKnown RBP8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 DYNC1LI2O43237 492 aaPredicted RBP8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 SGPL1O95470 568 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 YEATS4O95619 227 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 PGK1P00558 417 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 MMP3P08254 477 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 SFNP31947 248 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 GJA8P48165 433 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 NASPP49321 788 aaPredicted RBP8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 JAK3P52333 1124 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 KRT85P78386 507 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 SP4Q02446 784 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 PPP2R5CQ13362 524 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 FSCN1Q16658 493 aaKnown RBP8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 HSDL1Q3SXM5 330 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 ARL6IP4Q66PJ3 421 aaKnown RBP8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 B3GNT9Q6UX72 402 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 SMAP1Q8IYB5 467 aaPredicted RBP8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 RDM1Q8NG50 284 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 AFG1LQ8WV93 481 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 ABHD8Q96I13 439 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 SPATA33Q96N06 139 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 RAB34Q9BZG1 259 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 TTC12Q9H892 705 aaPredicted RBP8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 CFAP45Q9UL16 551 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 PCDHA12Q9UN75 941 aa8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 MORC2Q9Y6X9 1032 aaPredicted RBP8.55□□□□□ -1.04
HMGXB3-204ENST00000513318 EMSYQ7Z589 1322 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 SIP14410 1827 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 MYADML2A6NDP7 307 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 MOXD2PA6NHM9 499 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 WDR64B1ANS9 1081 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 DNM1LO00429 736 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 CTAGE5O15320 804 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 ZEB2O60315 1214 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 SORBS3O60504 671 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 KPNA6O60684 536 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 HOXD8P13378 290 aaPredicted RBP8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 PTGS1P23219 599 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 TCF7P36402 384 aaPredicted RBP8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 TXKP42681 527 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 ACTR2P61160 394 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 CEBPZQ03701 1054 aaKnown RBP8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 DNM1Q05193 864 aaKnown RBP8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 SPIRE1Q08AE8 756 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 PTPAQ15257 358 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 LRRC41Q15345 812 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 DGKDQ16760 1214 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 FOXD4L6Q3SYB3 417 aaPredicted RBP8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 GNASQ5JWF2 1037 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 FOXD4L3Q6VB84 417 aaPredicted RBP8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 MIER3Q7Z3K6 550 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 TNS4Q8IZW8 715 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 C4orf32Q8N8J7 132 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 ANKLE1Q8NAG6 615 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 PCSK9Q8NBP7 692 aaKnown RBP8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 LINC00301Q8NCQ3 95 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 KLHDC9Q8NEP7 349 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 SEPT1Q8WYJ6 367 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 GJA10Q969M2 543 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 UIMC1Q96RL1 719 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 GPR20Q99678 358 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 TSEN34Q9BSV6 310 aaKnown RBP8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 FTOQ9C0B1 505 aaKnown RBP eCLIP8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 UNC45AQ9H3U1 944 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 BCAS3Q9H6U6 928 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 VAV3Q9UKW4 847 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 SAMM50Q9Y512 469 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 CLIC4Q9Y696 253 aa8.54□□□□□ -1.04
HMGXB3-204ENST00000513318 GSTTP1A0A1W2PQM5 241 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 CHMP2AO43633 222 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 PPFIA4O75335 1185 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 ATG7O95352 703 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 CCNE2O96020 404 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 TFRCP02786 760 aaKnown RBP8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 LGALS2P05162 132 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 SUPT20HL2P0C7V6 817 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 NCLP19338 710 aaKnown RBP8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 PURAQ00577 322 aaKnown RBP8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 BEX3Q00994 111 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 SLC39A14Q15043 492 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 STK38Q15208 465 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 HAUS3Q68CZ6 603 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 NCAPH2Q6IBW4 605 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 CCSAPQ6IQ19 270 aaPredicted RBP8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 MIS18BP1Q6P0N0 1132 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 ABHD15Q6UXT9 468 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 DTHD1Q6ZMT9 781 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 IGSF22Q8N9C0 903 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 NEK9Q8TD19 979 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 KCNG4Q8TDN1 519 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 FERMT2Q96AC1 680 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 AK8Q96MA6 479 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 KATNAL1Q9BW62 490 aa8.53□□□□□ -1.04
HMGXB3-204ENST00000513318 DISC1Q9NRI5 854 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms