RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 CD52P31358 61 aa13.01□□□□□ -0.33
RNF4-218ENST00000513284 UTP14CQ5TAP6 766 aaKnown RBP13.01□□□□□ -0.33
RNF4-218ENST00000513284 DNAJB3Q8WWF6 145 aa13.01□□□□□ -0.33
RNF4-218ENST00000513284 NKD2Q969F2 451 aaPredicted RBP13.01□□□□□ -0.33
RNF4-218ENST00000513284 ZBTB10Q96DT7 871 aa13.01□□□□□ -0.33
RNF4-218ENST00000513284 APOL5Q9BWW9 433 aa13.01□□□□□ -0.33
RNF4-218ENST00000513284 HELLSQ9NRZ9 838 aa13.01□□□□□ -0.33
RNF4-218ENST00000513284 MAP3K20Q9NYL2 800 aaKnown RBP13.01□□□□□ -0.33
RNF4-218ENST00000513284 CDY2AQ9Y6F7 541 aa13.01□□□□□ -0.33
RNF4-218ENST00000513284 NRCAMQ92823 1304 aa13.01□□□□□ -0.33
RNF4-218ENST00000513284 DOCK5Q9H7D0 1870 aa13□□□□□ -0.33
RNF4-218ENST00000513284 NEDD4P46934 1319 aa13□□□□□ -0.33
RNF4-218ENST00000513284 SALL3Q9BXA9 1300 aa13□□□□□ -0.33
RNF4-218ENST00000513284 A0A0D9SFI3 127 aa13□□□□□ -0.33
RNF4-218ENST00000513284 FSCN2O14926 492 aa13□□□□□ -0.33
RNF4-218ENST00000513284 ASTLQ6HA08 431 aaPredicted RBP13□□□□□ -0.33
RNF4-218ENST00000513284 ANKRD54Q6NXT1 300 aa13□□□□□ -0.33
RNF4-218ENST00000513284 METTL7BQ6UX53 244 aa13□□□□□ -0.33
RNF4-218ENST00000513284 MFSD6Q6ZSS7 791 aa13□□□□□ -0.33
RNF4-218ENST00000513284 TSHZ1Q6ZSZ6 1077 aa13□□□□□ -0.33
RNF4-218ENST00000513284 ZNF589Q86UQ0 364 aaPredicted RBP13□□□□□ -0.33
RNF4-218ENST00000513284 NPAS4Q8IUM7 802 aa13□□□□□ -0.33
RNF4-218ENST00000513284 MICAL1Q8TDZ2 1067 aa13□□□□□ -0.33
RNF4-218ENST00000513284 RMDN1Q96DB5 314 aa13□□□□□ -0.33
RNF4-218ENST00000513284 NEK1Q96PY6 1258 aa13□□□□□ -0.33
RNF4-218ENST00000513284 AMNQ9BXJ7 453 aa13□□□□□ -0.33
RNF4-218ENST00000513284 HCSTQ9UBK5 93 aa13□□□□□ -0.33
RNF4-218ENST00000513284 MBLAC1A4D2B0 266 aaPredicted RBP12.99□□□□□ -0.33
RNF4-218ENST00000513284 NOP56O00567 594 aaKnown RBP12.99□□□□□ -0.33
RNF4-218ENST00000513284 PI15O43692 258 aa12.99□□□□□ -0.33
RNF4-218ENST00000513284 CCND2P30279 289 aa12.99□□□□□ -0.33
RNF4-218ENST00000513284 ASPRV1Q53RT3 343 aa12.99□□□□□ -0.33
RNF4-218ENST00000513284 INPP4AQ96PE3 977 aaPredicted RBP12.99□□□□□ -0.33
RNF4-218ENST00000513284 TMX1Q9H3N1 280 aa12.99□□□□□ -0.33
RNF4-218ENST00000513284 RTEL1Q9NZ71 1219 aa12.99□□□□□ -0.33
RNF4-218ENST00000513284 PCDHA1Q9Y5I3 950 aa12.99□□□□□ -0.33
RNF4-218ENST00000513284 MYH6P13533 1939 aa12.99□□□□□ -0.33
RNF4-218ENST00000513284 KMT2BQ9UMN6 2715 aaPredicted RBP12.98□□□□□ -0.33
RNF4-218ENST00000513284 EP300Q09472 2414 aaPredicted RBP12.98□□□□□ -0.33
RNF4-218ENST00000513284 CCDC171Q6TFL3 1326 aa12.98□□□□□ -0.33
RNF4-218ENST00000513284 C2CD4DB7Z1M9 353 aa12.98□□□□□ -0.33
RNF4-218ENST00000513284 TECP42680 631 aa12.98□□□□□ -0.33
RNF4-218ENST00000513284 UBE3AQ05086 875 aa12.98□□□□□ -0.33
RNF4-218ENST00000513284 NEDD9Q14511 834 aa12.98□□□□□ -0.33
RNF4-218ENST00000513284 MCMDC2Q4G0Z9 681 aa12.98□□□□□ -0.33
RNF4-218ENST00000513284 TAF2Q6P1X5 1199 aa12.98□□□□□ -0.33
RNF4-218ENST00000513284 FCHSD1Q86WN1 690 aa12.98□□□□□ -0.33
RNF4-218ENST00000513284 UBALD2Q8IYN6 164 aa12.98□□□□□ -0.33
RNF4-218ENST00000513284 ENAHQ8N8S7 591 aaPredicted RBP12.98□□□□□ -0.33
RNF4-218ENST00000513284 RASGRP4Q8TDF6 673 aa12.98□□□□□ -0.33
RNF4-218ENST00000513284 ZSWIM5Q9P217 1185 aa12.98□□□□□ -0.33
RNF4-218ENST00000513284 PADI3Q9ULW8 664 aa12.98□□□□□ -0.33
RNF4-218ENST00000513284 SORCS3Q9UPU3 1222 aa12.98□□□□□ -0.33
RNF4-218ENST00000513284 ZMYM6O95789 1325 aa12.97□□□□□ -0.33
RNF4-218ENST00000513284 KAT6AQ92794 2004 aa12.97□□□□□ -0.33
RNF4-218ENST00000513284 GSTTP1A0A1W2PQM5 241 aa12.97□□□□□ -0.33
RNF4-218ENST00000513284 HIDE1A8MVS5 230 aa12.97□□□□□ -0.33
RNF4-218ENST00000513284 DHX16O60231 1041 aaKnown RBP12.97□□□□□ -0.33
RNF4-218ENST00000513284 FGF18O76093 207 aa12.97□□□□□ -0.33
RNF4-218ENST00000513284 ASGR2P07307 311 aa12.97□□□□□ -0.33
RNF4-218ENST00000513284 PARP1P09874 1014 aaKnown RBP12.97□□□□□ -0.33
RNF4-218ENST00000513284 PCP11498 1178 aaKnown RBP12.97□□□□□ -0.33
RNF4-218ENST00000513284 NPR3P17342 541 aa12.97□□□□□ -0.33
RNF4-218ENST00000513284 CLCN5P51795 746 aa12.97□□□□□ -0.33
RNF4-218ENST00000513284 MRPS6P82932 125 aaKnown RBP12.97□□□□□ -0.33
RNF4-218ENST00000513284 APOBRQ0VD83 1088 aa12.97□□□□□ -0.33
RNF4-218ENST00000513284 GRIK4Q16099 956 aa12.97□□□□□ -0.33
RNF4-218ENST00000513284 ZBTB33Q86T24 672 aa12.97□□□□□ -0.33
RNF4-218ENST00000513284 SAMD3Q8N6K7 520 aa12.97□□□□□ -0.33
RNF4-218ENST00000513284 ESR2Q92731 530 aa12.97□□□□□ -0.33
RNF4-218ENST00000513284 CDCA3Q99618 268 aaPredicted RBP12.97□□□□□ -0.33
RNF4-218ENST00000513284 POMKQ9H5K3 350 aa12.97□□□□□ -0.33
RNF4-218ENST00000513284 KAT14Q9H8E8 782 aa12.97□□□□□ -0.33
RNF4-218ENST00000513284 SQORQ9Y6N5 450 aa12.97□□□□□ -0.33
RNF4-218ENST00000513284 CACNA1BQ00975 2339 aa12.96□□□□□ -0.33
RNF4-218ENST00000513284 FRMPD4Q14CM0 1322 aa12.96□□□□□ -0.33
RNF4-218ENST00000513284 GCOM1H8Y6P7 765 aaPredicted RBP12.96□□□□□ -0.33
RNF4-218ENST00000513284 ZBTB5O15062 677 aa12.96□□□□□ -0.33
RNF4-218ENST00000513284 MGEA5O60502 916 aa12.96□□□□□ -0.33
RNF4-218ENST00000513284 ATP9AO75110 1047 aa12.96□□□□□ -0.33
RNF4-218ENST00000513284 POLR2MP0CAP2 368 aa12.96□□□□□ -0.33
RNF4-218ENST00000513284 MX1P20591 662 aa12.96□□□□□ -0.33
RNF4-218ENST00000513284 SP4Q02446 784 aa12.96□□□□□ -0.33
RNF4-218ENST00000513284 MTMR3Q13615 1198 aa12.96□□□□□ -0.33
RNF4-218ENST00000513284 FAM102BQ5T8I3 360 aa12.96□□□□□ -0.33
RNF4-218ENST00000513284 CWF19L1Q69YN2 538 aaKnown RBP12.96□□□□□ -0.33
RNF4-218ENST00000513284 LLGL2Q6P1M3 1020 aa12.96□□□□□ -0.33
RNF4-218ENST00000513284 FEZF2Q8TBJ5 459 aa12.96□□□□□ -0.33
RNF4-218ENST00000513284 EVI5LQ96CN4 794 aa12.96□□□□□ -0.33
RNF4-218ENST00000513284 ZSCAN10Q96SZ4 725 aaPredicted RBP12.96□□□□□ -0.33
RNF4-218ENST00000513284 CWH43Q9H720 699 aa12.96□□□□□ -0.33
RNF4-218ENST00000513284 MAD2L2Q9UI95 211 aa12.96□□□□□ -0.33
RNF4-218ENST00000513284 ZNF215Q9UL58 517 aaPredicted RBP12.96□□□□□ -0.33
RNF4-218ENST00000513284 ZFHX4Q86UP3 3567 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 NCOR2Q9Y618 2525 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 B4E1Z4 1266 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 KLRF2D3W0D1 207 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 FIBPO43427 364 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 STAG3L1P0CL83 205 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 SCG2P13521 617 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms