RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 SGSM2O43147 1006 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 TADA3O75528 432 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 CYP17A1P05093 508 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 PMLP29590 882 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 LSP1P33241 339 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 ITKQ08881 620 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 STAT4Q14765 748 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 SEPT7Q16181 437 aaKnown RBP5.65□□□□□ -1.5
HTT-210ENST00000512909 DDB1Q16531 1140 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 SKOR2Q2VWA4 1001 aaPredicted RBP5.65□□□□□ -1.5
HTT-210ENST00000512909 PLEKHN1Q494U1 663 aaPredicted RBP5.65□□□□□ -1.5
HTT-210ENST00000512909 CPZQ66K79 652 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 HHIPL2Q6UWX4 724 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 CD300LDQ6UXZ3 194 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 NME9Q86XW9 330 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 AFAP1L2Q8N4X5 818 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 EFHBQ8N7U6 833 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 SHISA4Q96DD7 197 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 TSPAN17Q96FV3 270 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 ORAI3Q9BRQ5 295 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 OXSMQ9NWU1 459 aa5.65□□□□□ -1.5
HTT-210ENST00000512909 WASHC2AQ641Q2 1341 aa5.65□□□□□ -1.51
HTT-210ENST00000512909 NUP160Q12769 1436 aa5.65□□□□□ -1.51
HTT-210ENST00000512909 CARMIL2Q6F5E8 1435 aa5.65□□□□□ -1.51
HTT-210ENST00000512909 ADAMTS12P58397 1594 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 CEP170Q5SW79 1584 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 ERCC6L2Q5T890 1561 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.64□□□□□ -1.51
HTT-210ENST00000512909 TCRBV5S2A0A599 114 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 LRRC10BA6NIK2 292 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 MAN2B1O00754 1011 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 FOXP2O15409 715 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 MAFGO15525 162 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 S100BP04271 92 aaPredicted RBP5.64□□□□□ -1.51
HTT-210ENST00000512909 ATP2A2P16615 1042 aaKnown RBP5.64□□□□□ -1.51
HTT-210ENST00000512909 PTPN1P18031 435 aaKnown RBP5.64□□□□□ -1.51
HTT-210ENST00000512909 SLC9A1P19634 815 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 CD40P25942 277 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 ZNF200P98182 395 aaPredicted RBP5.64□□□□□ -1.51
HTT-210ENST00000512909 ADCY1Q08828 1119 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 MLANAQ16655 118 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 PAN2Q504Q3 1202 aaKnown RBP5.64□□□□□ -1.51
HTT-210ENST00000512909 VASNQ6EMK4 673 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 TIGD7Q6NT04 549 aaPredicted RBP5.64□□□□□ -1.51
HTT-210ENST00000512909 NECAB2Q7Z6G3 386 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 STRA8Q7Z7C7 330 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 AMIGO3Q86WK7 504 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 RBM12BQ8IXT5 1001 aaKnown RBP5.64□□□□□ -1.51
HTT-210ENST00000512909 SMC1BQ8NDV3 1235 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 MTMR8Q96EF0 704 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 CDIP1Q9H305 208 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 SMURF1Q9HCE7 757 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 PCDH18Q9HCL0 1135 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 DTLQ9NZJ0 730 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 KLHL14Q9P2G3 628 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 FBLN5Q9UBX5 448 aa5.64□□□□□ -1.51
HTT-210ENST00000512909 NEMP1O14524 444 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 BUB1BO60566 1050 aaPredicted RBP5.63□□□□□ -1.51
HTT-210ENST00000512909 AMY2AP04746 511 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 NCAM1P13591 858 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 AMY2BP19961 511 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 CCND1P24385 295 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 ADCYAP1R1P41586 468 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 SESN3P58005 492 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 EVA1CP58658 441 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 DSG1Q02413 1049 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 CC2D1AQ6P1N0 951 aaPredicted RBP5.63□□□□□ -1.51
HTT-210ENST00000512909 OTOP1Q7RTM1 612 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 KRTAP1-3Q8IUG1 177 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 FAM126BQ8IXS8 530 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 CALML6Q8TD86 181 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 SLC5A5Q92911 643 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 LIN37Q96GY3 246 aaPredicted RBP5.63□□□□□ -1.51
HTT-210ENST00000512909 ZNF552Q9H707 407 aaPredicted RBP5.63□□□□□ -1.51
HTT-210ENST00000512909 METTL14Q9HCE5 456 aaKnown RBP5.63□□□□□ -1.51
HTT-210ENST00000512909 SPO11Q9Y5K1 396 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 RAPGEF2Q9Y4G8 1499 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 KIAA0586Q9BVV6 1533 aa5.63□□□□□ -1.51
HTT-210ENST00000512909 HRKO00198 91 aa5.62□□□□□ -1.51
HTT-210ENST00000512909 GPR39O43194 453 aa5.62□□□□□ -1.51
HTT-210ENST00000512909 LTFP02788 710 aa5.62□□□□□ -1.51
HTT-210ENST00000512909 VIPR1P32241 457 aa5.62□□□□□ -1.51
HTT-210ENST00000512909 MECP2P51608 486 aaKnown RBP5.62□□□□□ -1.51
HTT-210ENST00000512909 SKIDA1Q1XH10 827 aa5.62□□□□□ -1.51
HTT-210ENST00000512909 HABP4Q5JVS0 413 aaKnown RBP5.62□□□□□ -1.51
HTT-210ENST00000512909 CBLL1Q75N03 491 aa5.62□□□□□ -1.51
HTT-210ENST00000512909 AMOTL1Q8IY63 956 aa5.62□□□□□ -1.51
HTT-210ENST00000512909 C7orf31Q8N865 590 aa5.62□□□□□ -1.51
HTT-210ENST00000512909 FBXO15Q8NCQ5 510 aaPredicted RBP5.62□□□□□ -1.51
HTT-210ENST00000512909 ARRDC4Q8NCT1 418 aa5.62□□□□□ -1.51
HTT-210ENST00000512909 TTLL11Q8NHH1 800 aa5.62□□□□□ -1.51
HTT-210ENST00000512909 GBP4Q96PP9 640 aa5.62□□□□□ -1.51
HTT-210ENST00000512909 SMAD5Q99717 465 aaKnown RBP5.62□□□□□ -1.51
HTT-210ENST00000512909 PUS7LQ9H0K6 701 aaKnown RBP5.62□□□□□ -1.51
HTT-210ENST00000512909 BCAS3Q9H6U6 928 aa5.62□□□□□ -1.51
HTT-210ENST00000512909 EMC7Q9NPA0 242 aa5.62□□□□□ -1.51
HTT-210ENST00000512909 SPTLC3Q9NUV7 552 aa5.62□□□□□ -1.51
HTT-210ENST00000512909 TYW1Q9NV66 732 aaKnown RBP5.62□□□□□ -1.51
HTT-210ENST00000512909 DDX56Q9NY93 547 aaKnown RBP5.62□□□□□ -1.51
HTT-210ENST00000512909 TNIKQ9UKE5 1360 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms