RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 HERVK_113Q902F9 699 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 ACDQ96AP0 544 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 ZNF576Q9H609 170 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 DIAPH3Q9NSV4 1193 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 MSRAQ9UJ68 235 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 MCM3APO60318 1980 aa8.4□□□□□ -1.06
USP46-208ENST00000512656 NCOR1O75376 2440 aa8.4□□□□□ -1.07
USP46-208ENST00000512656 RBM47A0AV96 593 aaKnown RBP8.39□□□□□ -1.07
USP46-208ENST00000512656 LZTS3O60299 673 aaPredicted RBP8.39□□□□□ -1.07
USP46-208ENST00000512656 IGHA1P01876 353 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 THBS1P07996 1170 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 MYL3P08590 195 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 ACRP10323 421 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 IRS1P35568 1242 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 PHKA2P46019 1235 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 RPS6P62753 249 aaKnown RBP8.39□□□□□ -1.07
USP46-208ENST00000512656 FOXK2Q01167 660 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 GRIN2CQ14957 1233 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 PPP2R5BQ15173 497 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 EFHC2Q5JST6 749 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 B4GALNT3Q6L9W6 998 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 CHD1LQ86WJ1 897 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 OR6J1Q8NGC5 347 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 C1orf216Q8TAB5 229 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 CLEC4DQ8WXI8 215 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 MTG1Q9BT17 334 aaPredicted RBP8.39□□□□□ -1.07
USP46-208ENST00000512656 NOC4LQ9BVI4 516 aaKnown RBP8.39□□□□□ -1.07
USP46-208ENST00000512656 TRPV6Q9H1D0 765 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 ALDH8A1Q9H2A2 487 aaPredicted RBP8.39□□□□□ -1.07
USP46-208ENST00000512656 CRISPLD1Q9H336 500 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 KAT14Q9H8E8 782 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 CTNNA3Q9UI47 895 aa8.39□□□□□ -1.07
USP46-208ENST00000512656 DDX49Q9Y6V7 483 aaKnown RBP8.39□□□□□ -1.07
USP46-208ENST00000512656 EYSQ5T1H1 3165 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 GRIN2DO15399 1336 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 B4GALT4O60513 344 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 PFKMP08237 780 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 EDNRBP24530 442 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 MSX1P28360 303 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 GDF10P55107 478 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 CCL23P55773 120 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 PSMC6P62333 389 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 PURAQ00577 322 aaKnown RBP8.38□□□□□ -1.07
USP46-208ENST00000512656 NUCB1Q02818 461 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 UBAP2LQ14157 1087 aaKnown RBP8.38□□□□□ -1.07
USP46-208ENST00000512656 TTLL4Q14679 1199 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 IMMTQ16891 758 aaKnown RBP8.38□□□□□ -1.07
USP46-208ENST00000512656 USH1GQ495M9 461 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 ASPRV1Q53RT3 343 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 CWC27Q6UX04 472 aaKnown RBP8.38□□□□□ -1.07
USP46-208ENST00000512656 SLC30A10Q6XR72 485 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 MCF2L2Q86YR7 1114 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 TBC1D10CQ8IV04 446 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 PLEKHM2Q8IWE5 1019 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 BEND7Q8N7W2 519 aaPredicted RBP8.38□□□□□ -1.07
USP46-208ENST00000512656 ANKS1AQ92625 1134 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 DSCC1Q9BVC3 393 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 PBX4Q9BYU1 374 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 KRT23Q9C075 422 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 CNNM2Q9H8M5 875 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 SLC28A3Q9HAS3 691 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 GPAMQ9HCL2 828 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 SLC4A7Q9Y6M7 1214 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 TRANK1O15050 2925 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 MYO9BQ13459 2157 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 VCANP13611 3396 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 CDH23Q9H251 3354 aa8.38□□□□□ -1.07
USP46-208ENST00000512656 TNKSO95271 1327 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 ABCB11O95342 1321 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 NEDD4P46934 1319 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 A6NJR5 290 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 GRXCR1A8MXD5 290 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 OIP5O43482 229 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 DHX16O60231 1041 aaKnown RBP8.37□□□□□ -1.07
USP46-208ENST00000512656 GOLGA8HP0CJ92 632 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 TXNP10599 105 aaKnown RBP8.37□□□□□ -1.07
USP46-208ENST00000512656 ACTN1P12814 892 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 RFC2P35250 354 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 PTPN11Q06124 597 aaPredicted RBP8.37□□□□□ -1.07
USP46-208ENST00000512656 TRAF1Q13077 416 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 FAM47CQ5HY64 1035 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 NFRKBQ6P4R8 1299 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 OTOP2Q7RTS6 562 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 RETREG2Q8NC44 543 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 NSUN6Q8TEA1 469 aaKnown RBP8.37□□□□□ -1.07
USP46-208ENST00000512656 IWS1Q96ST2 819 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 ZKSCAN3Q9BRR0 538 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 UBAC1Q9BSL1 405 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 UBA5Q9GZZ9 404 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 ATXN7L1Q9ULK2 861 aaPredicted RBP8.37□□□□□ -1.07
USP46-208ENST00000512656 MRPL11Q9Y3B7 192 aaKnown RBP8.37□□□□□ -1.07
USP46-208ENST00000512656 CHD7Q9P2D1 2997 aa8.37□□□□□ -1.07
USP46-208ENST00000512656 UMODL1Q5DID0 1318 aa8.36□□□□□ -1.07
USP46-208ENST00000512656 PARP1P09874 1014 aaKnown RBP8.36□□□□□ -1.07
USP46-208ENST00000512656 PTGS1P23219 599 aa8.36□□□□□ -1.07
USP46-208ENST00000512656 SMTNP53814 917 aa8.36□□□□□ -1.07
USP46-208ENST00000512656 BFSP2Q13515 415 aa8.36□□□□□ -1.07
USP46-208ENST00000512656 STXBP2Q15833 593 aa8.36□□□□□ -1.07
USP46-208ENST00000512656 CDC37Q16543 378 aaPredicted RBP8.36□□□□□ -1.07
USP46-208ENST00000512656 TMEM63BQ5T3F8 832 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms