RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 RCAN1P53805 252 aa16.81■□□□□ 0.28
CCHCR1-229ENST00000512418 MGAT3Q09327 533 aa16.81■□□□□ 0.28
CCHCR1-229ENST00000512418 GLT8D2Q9H1C3 349 aa16.81■□□□□ 0.28
CCHCR1-229ENST00000512418 AZI2Q9H6S1 392 aa16.81■□□□□ 0.28
CCHCR1-229ENST00000512418 V9GY48 417 aaPredicted RBP16.81■□□□□ 0.28
CCHCR1-229ENST00000512418 NFASCO94856 1347 aa16.8■□□□□ 0.28
CCHCR1-229ENST00000512418 RRN3P2A6NIE6 340 aa16.8■□□□□ 0.28
CCHCR1-229ENST00000512418 AP3B2Q13367 1082 aa16.8■□□□□ 0.28
CCHCR1-229ENST00000512418 EPC2Q52LR7 807 aa16.8■□□□□ 0.28
CCHCR1-229ENST00000512418 CEP55Q53EZ4 464 aa16.8■□□□□ 0.28
CCHCR1-229ENST00000512418 MARCH8Q5T0T0 291 aa16.8■□□□□ 0.28
CCHCR1-229ENST00000512418 CYP2W1Q8TAV3 490 aa16.8■□□□□ 0.28
CCHCR1-229ENST00000512418 TNPO1Q92973 898 aaKnown RBP16.8■□□□□ 0.28
CCHCR1-229ENST00000512418 PGBD1Q96JS3 809 aa16.8■□□□□ 0.28
CCHCR1-229ENST00000512418 SDF4Q9BRK5 362 aa16.8■□□□□ 0.28
CCHCR1-229ENST00000512418 ANO3Q9BYT9 981 aa16.8■□□□□ 0.28
CCHCR1-229ENST00000512418 BARHL2Q9NY43 387 aa16.8■□□□□ 0.28
CCHCR1-229ENST00000512418 SMCO2A6NFE2 343 aa16.79■□□□□ 0.28
CCHCR1-229ENST00000512418 FGD1P98174 961 aa16.79■□□□□ 0.28
CCHCR1-229ENST00000512418 LPIN1Q14693 890 aa16.79■□□□□ 0.28
CCHCR1-229ENST00000512418 PTPROQ16827 1216 aa16.79■□□□□ 0.28
CCHCR1-229ENST00000512418 DNAJB3Q8WWF6 145 aa16.79■□□□□ 0.28
CCHCR1-229ENST00000512418 PCYT2Q99447 389 aa16.79■□□□□ 0.28
CCHCR1-229ENST00000512418 FAM217BQ9NTX9 383 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-229ENST00000512418 BRWD1Q9NSI6 2320 aa16.79■□□□□ 0.28
CCHCR1-229ENST00000512418 INSRRP14616 1297 aa16.78■□□□□ 0.28
CCHCR1-229ENST00000512418 CDC27P30260 824 aa16.78■□□□□ 0.28
CCHCR1-229ENST00000512418 SREBF1P36956 1147 aa16.78■□□□□ 0.28
CCHCR1-229ENST00000512418 CLK2P49760 499 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-229ENST00000512418 ACTR2P61160 394 aa16.78■□□□□ 0.28
CCHCR1-229ENST00000512418 IGBP1P78318 339 aa16.78■□□□□ 0.28
CCHCR1-229ENST00000512418 FBXO47Q5MNV8 452 aa16.78■□□□□ 0.28
CCHCR1-229ENST00000512418 TSHZ1Q6ZSZ6 1077 aa16.78■□□□□ 0.28
CCHCR1-229ENST00000512418 PLPPR4Q7Z2D5 763 aa16.78■□□□□ 0.28
CCHCR1-229ENST00000512418 MRPL38Q96DV4 380 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-229ENST00000512418 AGO4Q9HCK5 861 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-229ENST00000512418 TRPC6Q9Y210 931 aa16.78■□□□□ 0.28
CCHCR1-229ENST00000512418 CDY2AQ9Y6F7 541 aa16.78■□□□□ 0.28
CCHCR1-229ENST00000512418 RALGAPA2Q2PPJ7 1873 aa16.78■□□□□ 0.28
CCHCR1-229ENST00000512418 CCDC196A0A1B0GTZ2 297 aa16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 H3BNC9 293 aa16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 MEIS1O00470 390 aa16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 ARP10275 920 aa16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 SLC26A2P50443 739 aa16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 METAP2P50579 478 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 STAT5BP51692 787 aa16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 MRPS6P82932 125 aaKnown RBP16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 ITGB3BPQ13352 177 aaPredicted RBP16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 PFKFB3Q16875 520 aaPredicted RBP16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 TIGD5Q53EQ6 642 aa16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 IER5Q5VY09 327 aa16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 NIPA1Q7RTP0 329 aa16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 TMEM192Q8IY95 271 aa16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 IL17RAQ96F46 866 aa16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 FAM49AQ9H0Q0 323 aaPredicted RBP16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 UBE2ZQ9H832 354 aaPredicted RBP16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 TMEM260Q9NX78 707 aa16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 NAP1L2Q9ULW6 460 aaPredicted RBP16.77■□□□□ 0.28
CCHCR1-229ENST00000512418 NLRC5Q86WI3 1866 aa16.77■□□□□ 0.27
CCHCR1-229ENST00000512418 ADGRA3Q8IWK6 1321 aa16.76■□□□□ 0.27
CCHCR1-229ENST00000512418 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.76■□□□□ 0.27
CCHCR1-229ENST00000512418 M0QZ92 97 aa16.76■□□□□ 0.27
CCHCR1-229ENST00000512418 ZNF76P36508 570 aa16.76■□□□□ 0.27
CCHCR1-229ENST00000512418 GPM6BQ13491 265 aa16.76■□□□□ 0.27
CCHCR1-229ENST00000512418 PLCB4Q15147 1175 aa16.76■□□□□ 0.27
CCHCR1-229ENST00000512418 FIBCD1Q8N539 461 aa16.76■□□□□ 0.27
CCHCR1-229ENST00000512418 KCNB2Q92953 911 aa16.76■□□□□ 0.27
CCHCR1-229ENST00000512418 ZBTB10Q96DT7 871 aa16.76■□□□□ 0.27
CCHCR1-229ENST00000512418 PCDHA2Q9Y5H9 948 aa16.76■□□□□ 0.27
CCHCR1-229ENST00000512418 SQORQ9Y6N5 450 aa16.76■□□□□ 0.27
CCHCR1-229ENST00000512418 NID2Q14112 1375 aa16.76■□□□□ 0.27
CCHCR1-229ENST00000512418 ESYT2A0FGR8 921 aa16.75■□□□□ 0.27
CCHCR1-229ENST00000512418 ENPP3O14638 875 aa16.75■□□□□ 0.27
CCHCR1-229ENST00000512418 ATG7O95352 703 aa16.75■□□□□ 0.27
CCHCR1-229ENST00000512418 SCG2P13521 617 aa16.75■□□□□ 0.27
CCHCR1-229ENST00000512418 CPA1P15085 419 aa16.75■□□□□ 0.27
CCHCR1-229ENST00000512418 ADD1P35611 737 aaKnown RBP16.75■□□□□ 0.27
CCHCR1-229ENST00000512418 JAKMIP1Q96N16 626 aaKnown RBP16.75■□□□□ 0.27
CCHCR1-229ENST00000512418 AGO3Q9H9G7 860 aaKnown RBP16.75■□□□□ 0.27
CCHCR1-229ENST00000512418 RC3H2Q9HBD1 1191 aaKnown RBP16.75■□□□□ 0.27
CCHCR1-229ENST00000512418 RWDD3Q9Y3V2 267 aa16.75■□□□□ 0.27
CCHCR1-229ENST00000512418 TRPV2Q9Y5S1 764 aa16.75■□□□□ 0.27
CCHCR1-229ENST00000512418 TTC3P53804 2025 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 IGKV6D-21A0A0A0MT36 114 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 POTEB3A0JP26 581 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 C5orf67F2Z3F1 127 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 COL9A1P20849 921 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 KCNA5P22460 613 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 CD52P31358 61 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 HSPA4P34932 840 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 CTNNB1P35222 781 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 APOBRQ0VD83 1088 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 LEXMQ3ZCV2 418 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 JAKMIP3Q5VZ66 844 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 MCTP2Q6DN12 878 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 BLOC1S2Q6QNY1 142 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 POTEBQ6S5H4 581 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 Q6ZUG5 572 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 BANK1Q8NDB2 785 aa16.74■□□□□ 0.27
CCHCR1-229ENST00000512418 CCDC12Q8WUD4 166 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms