RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 FOSBP53539 338 aa18.73■□□□□ 0.59
DDX41-213ENST00000512027 GRIK4Q16099 956 aa18.73■□□□□ 0.59
DDX41-213ENST00000512027 TMCO2Q7Z6W1 182 aaPredicted RBP18.73■□□□□ 0.59
DDX41-213ENST00000512027 CCDC60Q8IWA6 550 aaPredicted RBP18.73■□□□□ 0.59
DDX41-213ENST00000512027 DAGLBQ8NCG7 672 aa18.73■□□□□ 0.59
DDX41-213ENST00000512027 TRAPPC12Q8WVT3 735 aa18.73■□□□□ 0.59
DDX41-213ENST00000512027 TIFAQ96CG3 184 aa18.73■□□□□ 0.59
DDX41-213ENST00000512027 NKX2-4Q9H2Z4 354 aa18.73■□□□□ 0.59
DDX41-213ENST00000512027 AZI2Q9H6S1 392 aa18.73■□□□□ 0.59
DDX41-213ENST00000512027 ORC3Q9UBD5 711 aaPredicted RBP18.73■□□□□ 0.59
DDX41-213ENST00000512027 CHD7Q9P2D1 2997 aa18.73■□□□□ 0.59
DDX41-213ENST00000512027 EYSQ5T1H1 3165 aa18.73■□□□□ 0.59
DDX41-213ENST00000512027 MICAL3Q7RTP6 2002 aa18.73■□□□□ 0.59
DDX41-213ENST00000512027 MYH9P35579 1960 aaKnown RBP18.72■□□□□ 0.59
DDX41-213ENST00000512027 RSPH10B2B2RC85 870 aa18.72■□□□□ 0.59
DDX41-213ENST00000512027 JAK2O60674 1132 aa18.72■□□□□ 0.59
DDX41-213ENST00000512027 EIF5BO60841 1220 aaKnown RBP18.72■□□□□ 0.59
DDX41-213ENST00000512027 TDP2O95551 362 aa18.72■□□□□ 0.59
DDX41-213ENST00000512027 CXCL10P02778 98 aa18.72■□□□□ 0.59
DDX41-213ENST00000512027 RSPH10BP0C881 870 aa18.72■□□□□ 0.59
DDX41-213ENST00000512027 ATP2A2P16615 1042 aaKnown RBP18.72■□□□□ 0.59
DDX41-213ENST00000512027 SETQ01105 290 aaPredicted RBP18.72■□□□□ 0.59
DDX41-213ENST00000512027 PLCB4Q15147 1175 aa18.72■□□□□ 0.59
DDX41-213ENST00000512027 OXER1Q8TDS5 423 aa18.72■□□□□ 0.59
DDX41-213ENST00000512027 MYLIPQ8WY64 445 aa18.72■□□□□ 0.59
DDX41-213ENST00000512027 CDX2Q99626 313 aaPredicted RBP18.72■□□□□ 0.59
DDX41-213ENST00000512027 KIF2CQ99661 725 aa18.72■□□□□ 0.59
DDX41-213ENST00000512027 PHF20Q9BVI0 1012 aa18.72■□□□□ 0.59
DDX41-213ENST00000512027 TRPC6Q9Y210 931 aa18.72■□□□□ 0.59
DDX41-213ENST00000512027 NRCAMQ92823 1304 aa18.72■□□□□ 0.59
DDX41-213ENST00000512027 LOXHD1Q8IVV2 1947 aa18.71■□□□□ 0.59
DDX41-213ENST00000512027 BACH1O14867 736 aa18.71■□□□□ 0.59
DDX41-213ENST00000512027 MSH4O15457 936 aa18.71■□□□□ 0.59
DDX41-213ENST00000512027 ATG7O95352 703 aa18.71■□□□□ 0.59
DDX41-213ENST00000512027 GNAT1P11488 350 aa18.71■□□□□ 0.59
DDX41-213ENST00000512027 INSRRP14616 1297 aa18.71■□□□□ 0.59
DDX41-213ENST00000512027 STAT5BP51692 787 aa18.71■□□□□ 0.59
DDX41-213ENST00000512027 GRIN2CQ14957 1233 aa18.71■□□□□ 0.59
DDX41-213ENST00000512027 MARCH8Q5T0T0 291 aa18.71■□□□□ 0.59
DDX41-213ENST00000512027 ABHD15Q6UXT9 468 aa18.71■□□□□ 0.59
DDX41-213ENST00000512027 NSUN7Q8NE18 718 aaKnown RBP18.71■□□□□ 0.59
DDX41-213ENST00000512027 TUBE1Q9UJT0 475 aa18.71■□□□□ 0.59
DDX41-213ENST00000512027 IGKV6D-21A0A0A0MT36 114 aa18.7■□□□□ 0.58
DDX41-213ENST00000512027 DEFB103AP81534 67 aa18.7■□□□□ 0.58
DDX41-213ENST00000512027 INF2Q27J81 1249 aa18.7■□□□□ 0.58
DDX41-213ENST00000512027 CNKSR3Q6P9H4 555 aa18.7■□□□□ 0.58
DDX41-213ENST00000512027 ZNF576Q9H609 170 aa18.7■□□□□ 0.58
DDX41-213ENST00000512027 FAM205CA6NFA0 338 aa18.69■□□□□ 0.58
DDX41-213ENST00000512027 USP11P51784 963 aa18.69■□□□□ 0.58
DDX41-213ENST00000512027 WDR5P61964 334 aaKnown RBP18.69■□□□□ 0.58
DDX41-213ENST00000512027 NONOQ15233 471 aaKnown RBP eCLIP18.69■□□□□ 0.58
DDX41-213ENST00000512027 SWSAP1Q6NVH7 229 aa18.69■□□□□ 0.58
DDX41-213ENST00000512027 PLPPR4Q7Z2D5 763 aa18.69■□□□□ 0.58
DDX41-213ENST00000512027 TRMT1LQ7Z2T5 733 aaKnown RBP18.69■□□□□ 0.58
DDX41-213ENST00000512027 DBF4BQ8NFT6 615 aa18.69■□□□□ 0.58
DDX41-213ENST00000512027 DNAJB3Q8WWF6 145 aa18.69■□□□□ 0.58
DDX41-213ENST00000512027 ZNF302Q9NR11 478 aa18.69■□□□□ 0.58
DDX41-213ENST00000512027 TBC1D22BQ9NU19 505 aa18.69■□□□□ 0.58
DDX41-213ENST00000512027 MSRAQ9UJ68 235 aa18.69■□□□□ 0.58
DDX41-213ENST00000512027 STXBP5LQ9Y2K9 1186 aa18.69■□□□□ 0.58
DDX41-213ENST00000512027 EVPLQ92817 2033 aa18.68■□□□□ 0.58
DDX41-213ENST00000512027 TMEM265A0A087WTH1 108 aa18.68■□□□□ 0.58
DDX41-213ENST00000512027 POTEB3A0JP26 581 aa18.68■□□□□ 0.58
DDX41-213ENST00000512027 MBLAC1A4D2B0 266 aaPredicted RBP18.68■□□□□ 0.58
DDX41-213ENST00000512027 CHMP2AO43633 222 aa18.68■□□□□ 0.58
DDX41-213ENST00000512027 BAIAP3O94812 1187 aa18.68■□□□□ 0.58
DDX41-213ENST00000512027 ARHGEF15O94989 841 aa18.68■□□□□ 0.58
DDX41-213ENST00000512027 ATP4AP20648 1035 aa18.68■□□□□ 0.58
DDX41-213ENST00000512027 RAB30Q15771 203 aa18.68■□□□□ 0.58
DDX41-213ENST00000512027 EARS2Q5JPH6 523 aaKnown RBP18.68■□□□□ 0.58
DDX41-213ENST00000512027 GALNT17Q6IS24 598 aa18.68■□□□□ 0.58
DDX41-213ENST00000512027 MIS18BP1Q6P0N0 1132 aa18.68■□□□□ 0.58
DDX41-213ENST00000512027 POTEBQ6S5H4 581 aa18.68■□□□□ 0.58
DDX41-213ENST00000512027 KRT25Q7Z3Z0 450 aa18.68■□□□□ 0.58
DDX41-213ENST00000512027 C22orf23Q9BZE7 217 aa18.68■□□□□ 0.58
DDX41-213ENST00000512027 FAM49AQ9H0Q0 323 aaPredicted RBP18.68■□□□□ 0.58
DDX41-213ENST00000512027 MYO9BQ13459 2157 aa18.68■□□□□ 0.58
DDX41-213ENST00000512027 SLC37A4O43826 429 aa18.67■□□□□ 0.58
DDX41-213ENST00000512027 PARNO95453 639 aaKnown RBP18.67■□□□□ 0.58
DDX41-213ENST00000512027 CHRNA1P02708 482 aa18.67■□□□□ 0.58
DDX41-213ENST00000512027 KCNJ6P48051 423 aa18.67■□□□□ 0.58
DDX41-213ENST00000512027 NR5A1Q13285 461 aa18.67■□□□□ 0.58
DDX41-213ENST00000512027 LETM2Q2VYF4 491 aa18.67■□□□□ 0.58
DDX41-213ENST00000512027 FAM160B1Q5W0V3 765 aa18.67■□□□□ 0.58
DDX41-213ENST00000512027 ZNF746Q6NUN9 644 aaPredicted RBP18.67■□□□□ 0.58
DDX41-213ENST00000512027 PDXDC2PQ6P474 469 aa18.67■□□□□ 0.58
DDX41-213ENST00000512027 PIK3AP1Q6ZUJ8 805 aa18.67■□□□□ 0.58
DDX41-213ENST00000512027 HERC6Q8IVU3 1022 aa18.67■□□□□ 0.58
DDX41-213ENST00000512027 CCDC83Q8IWF9 413 aa18.67■□□□□ 0.58
DDX41-213ENST00000512027 SLC5A5Q92911 643 aa18.67■□□□□ 0.58
DDX41-213ENST00000512027 SLC9A7Q96T83 725 aa18.67■□□□□ 0.58
DDX41-213ENST00000512027 SAMM50Q9Y512 469 aa18.67■□□□□ 0.58
DDX41-213ENST00000512027 TRANK1O15050 2925 aa18.67■□□□□ 0.58
DDX41-213ENST00000512027 CCDC194A0A1B0GVG4 234 aa18.66■□□□□ 0.58
DDX41-213ENST00000512027 CA3P07451 260 aa18.66■□□□□ 0.58
DDX41-213ENST00000512027 XBP1P17861 261 aa18.66■□□□□ 0.58
DDX41-213ENST00000512027 KRT76Q01546 638 aa18.66■□□□□ 0.58
DDX41-213ENST00000512027 MGAT3Q09327 533 aa18.66■□□□□ 0.58
DDX41-213ENST00000512027 TMEM62Q0P6H9 643 aa18.66■□□□□ 0.58
DDX41-213ENST00000512027 Q4G0T1 1027 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms