RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 GJA4P35212 333 aa4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 RAP1GAPP47736 663 aa4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 LSSP48449 732 aa4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 SRSF3P84103 164 aaKnown RBP4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 ZNF200P98182 395 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 RNF219Q5W0B1 726 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 FSTL4Q6MZW2 842 aa4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 LCNL1Q6ZST4 164 aa4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 SYDE1Q6ZW31 735 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 OTOP1Q7RTM1 612 aa4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 HDGFL2Q7Z4V5 671 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 NOSTRINQ8IVI9 506 aa4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 KIAA1958Q8N8K9 716 aa4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 CLEC4DQ8WXI8 215 aa4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 TSPAN17Q96FV3 270 aa4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 KCNH7Q9NS40 1196 aa4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 TOMM22Q9NS69 142 aa4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 SPTLC3Q9NUV7 552 aa4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 APOBEC2Q9Y235 224 aaKnown RBP4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 TELO2Q9Y4R8 837 aa4.7□□□□□ -1.66
TRAPPC11-207ENST00000511409 FAM90A27PA6NNH2 459 aa4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 BUB1BO60566 1050 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 ZBTB48P10074 688 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 BPIP17213 487 aa4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 STAT5AP42229 794 aa4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 GUCY2FP51841 1108 aa4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 YBX1P67809 324 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 PAN2Q504Q3 1202 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 IQSEC1Q6DN90 963 aa4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 ETV3LQ6ZN32 361 aa4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 LHFPL2Q6ZUX7 228 aa4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 TTLL10Q6ZVT0 673 aa4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 FERMT3Q86UX7 667 aa4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 SPATS2Q86XZ4 545 aaKnown RBP4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 EMC7Q9NPA0 242 aa4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 CD320Q9NPF0 282 aa4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 SLC5A4Q9NY91 659 aa4.69□□□□□ -1.66
TRAPPC11-207ENST00000511409 TEX51A0A1B0GUA7 166 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 B8ZZF3 427 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 ALG1L2C9J202 215 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 DVL2O14641 736 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 GPR39O43194 453 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 PMLP29590 882 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 EPHA5P54756 1037 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 NCKAP1LP55160 1127 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 CD300LDQ6UXZ3 194 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 ZC3H18Q86VM9 953 aaKnown RBP4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 AMIGO3Q86WK7 504 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 LRRC56Q8IYG6 542 aaPredicted RBP4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 RPUSD2Q8IZ73 545 aaKnown RBP4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 EFHBQ8N7U6 833 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 ERCC4Q92889 916 aaPredicted RBP4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 TOE1Q96GM8 510 aaKnown RBP4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 SCYL1Q96KG9 808 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 ELF4Q99607 663 aaPredicted RBP4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 KCNK12Q9HB15 430 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 ACSS2Q9NR19 701 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 DTLQ9NZJ0 730 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 SPO11Q9Y5K1 396 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 B3GALT1Q9Y5Z6 326 aa4.68□□□□□ -1.66
TRAPPC11-207ENST00000511409 MYOCOSA0A1B0GUC4 107 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 ACOT7O00154 380 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 NFIBO00712 420 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 FOXP2O15409 715 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 RAB11FIP3O75154 756 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 ULK1O75385 1050 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 TMEM253P0C7T8 217 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 NCAM1P13591 858 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 FAHP16930 419 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 NKX3-2P78367 333 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 ITKQ08881 620 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 SEC23AQ15436 765 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 DDB1Q16531 1140 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 CREB3L3Q68CJ9 461 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 FAM126BQ8IXS8 530 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 HIPK4Q8NE63 616 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 TTLL11Q8NHH1 800 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 DLG3Q92796 817 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 SLC5A5Q92911 643 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 CEP89Q96ST8 783 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 MCOLN1Q9GZU1 580 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 DDX56Q9NY93 547 aaKnown RBP4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 ARHGAP28Q9P2N2 729 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 PLA2G2DQ9UNK4 145 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 FAN1Q9Y2M0 1017 aa4.67□□□□□ -1.66
TRAPPC11-207ENST00000511409 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 ETV2O00321 342 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 KATNA1O75449 491 aa4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 C4BPAP04003 597 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 CYP17A1P05093 508 aa4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 ASGR2P07307 311 aa4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 MMEP08473 750 aa4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 C1QTNF9P0C862 333 aa4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 PFKLP17858 780 aa4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 PTX3P26022 381 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 MC3RP41968 323 aa4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 TARBP2Q15633 366 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 BROXQ5VW32 411 aa4.66□□□□□ -1.66
TRAPPC11-207ENST00000511409 CC2D1AQ6P1N0 951 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms