RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-208ENST00000511175 LARP4BQ92615 738 aaKnown RBP4.83□□□□□ -1.64
SUB1-208ENST00000511175 PLA2G12BQ9BX93 195 aa4.83□□□□□ -1.64
SUB1-208ENST00000511175 ACTR10Q9NZ32 417 aa4.83□□□□□ -1.64
SUB1-208ENST00000511175 SLC30A1Q9Y6M5 507 aa4.83□□□□□ -1.64
SUB1-208ENST00000511175 PCSK5Q92824 1860 aa4.82□□□□□ -1.64
SUB1-208ENST00000511175 U2SURPO15042 1029 aaKnown RBP4.82□□□□□ -1.64
SUB1-208ENST00000511175 DLX3O60479 287 aa4.82□□□□□ -1.64
SUB1-208ENST00000511175 POLD1P28340 1107 aa4.82□□□□□ -1.64
SUB1-208ENST00000511175 INHBCP55103 352 aa4.82□□□□□ -1.64
SUB1-208ENST00000511175 PPP2R2AP63151 447 aa4.82□□□□□ -1.64
SUB1-208ENST00000511175 MAP4K2Q12851 820 aa4.82□□□□□ -1.64
SUB1-208ENST00000511175 TOP3AQ13472 1001 aaPredicted RBP4.82□□□□□ -1.64
SUB1-208ENST00000511175 ZNF568Q3ZCX4 644 aa4.82□□□□□ -1.64
SUB1-208ENST00000511175 HABP4Q5JVS0 413 aaKnown RBP4.82□□□□□ -1.64
SUB1-208ENST00000511175 KCNT2Q6UVM3 1135 aa4.82□□□□□ -1.64
SUB1-208ENST00000511175 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.82□□□□□ -1.64
SUB1-208ENST00000511175 IER2Q9BTL4 223 aa4.82□□□□□ -1.64
SUB1-208ENST00000511175 PDGFDQ9GZP0 370 aaPredicted RBP4.82□□□□□ -1.64
SUB1-208ENST00000511175 MMRN2Q9H8L6 949 aa4.82□□□□□ -1.64
SUB1-208ENST00000511175 ZBTB7CA1YPR0 619 aa4.81□□□□□ -1.64
SUB1-208ENST00000511175 GNAT1P11488 350 aa4.81□□□□□ -1.64
SUB1-208ENST00000511175 VAMP1P23763 118 aa4.81□□□□□ -1.64
SUB1-208ENST00000511175 ACRV1P26436 265 aa4.81□□□□□ -1.64
SUB1-208ENST00000511175 FOXL1Q12952 345 aa4.81□□□□□ -1.64
SUB1-208ENST00000511175 ZNF627Q7L945 461 aa4.81□□□□□ -1.64
SUB1-208ENST00000511175 DNAJC10Q8IXB1 793 aa4.81□□□□□ -1.64
SUB1-208ENST00000511175 KCTD13Q8WZ19 329 aa4.81□□□□□ -1.64
SUB1-208ENST00000511175 CD244Q9BZW8 370 aa4.81□□□□□ -1.64
SUB1-208ENST00000511175 C12orf65Q9H3J6 166 aaKnown RBP4.81□□□□□ -1.64
SUB1-208ENST00000511175 DSEQ9UL01 958 aa4.81□□□□□ -1.64
SUB1-208ENST00000511175 INPP5FQ9Y2H2 1132 aa4.81□□□□□ -1.64
SUB1-208ENST00000511175 NR2E1Q9Y466 385 aa4.81□□□□□ -1.64
SUB1-208ENST00000511175 A0A1W2PQU0 124 aa4.8□□□□□ -1.64
SUB1-208ENST00000511175 ATF4P18848 351 aaPredicted RBP4.8□□□□□ -1.64
SUB1-208ENST00000511175 GRK2P25098 689 aa4.8□□□□□ -1.64
SUB1-208ENST00000511175 GRK3P35626 688 aa4.8□□□□□ -1.64
SUB1-208ENST00000511175 EPHA5P54756 1037 aa4.8□□□□□ -1.64
SUB1-208ENST00000511175 SPIRE1Q08AE8 756 aa4.8□□□□□ -1.64
SUB1-208ENST00000511175 TUBA3CQ13748 450 aa4.8□□□□□ -1.64
SUB1-208ENST00000511175 SLC10A6Q3KNW5 377 aa4.8□□□□□ -1.64
SUB1-208ENST00000511175 TUBA3EQ6PEY2 450 aa4.8□□□□□ -1.64
SUB1-208ENST00000511175 LBX2Q6XYB7 198 aa4.8□□□□□ -1.64
SUB1-208ENST00000511175 KCTD1Q719H9 257 aa4.8□□□□□ -1.64
SUB1-208ENST00000511175 FAM89AQ96GI7 184 aa4.8□□□□□ -1.64
SUB1-208ENST00000511175 AGAP2Q99490 1192 aa4.8□□□□□ -1.64
SUB1-208ENST00000511175 KIAA1683Q9H0B3 1180 aa4.8□□□□□ -1.64
SUB1-208ENST00000511175 CCDC9Q9Y3X0 531 aaKnown RBP4.8□□□□□ -1.64
SUB1-208ENST00000511175 TNFRSF18Q9Y5U5 241 aa4.8□□□□□ -1.64
SUB1-208ENST00000511175 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.79□□□□□ -1.64
SUB1-208ENST00000511175 GJB6O95452 261 aa4.79□□□□□ -1.64
SUB1-208ENST00000511175 PDE6AP16499 860 aa4.79□□□□□ -1.64
SUB1-208ENST00000511175 LARP4Q71RC2 724 aaKnown RBP eCLIP4.79□□□□□ -1.646e-12■□□□□ 10.9
SUB1-208ENST00000511175 SH3RF2Q8TEC5 729 aa4.79□□□□□ -1.64
SUB1-208ENST00000511175 CFHR4Q92496 578 aa4.79□□□□□ -1.64
SUB1-208ENST00000511175 TLR9Q9NR96 1032 aa4.79□□□□□ -1.64
SUB1-208ENST00000511175 HECAQ9UBI9 543 aaPredicted RBP4.79□□□□□ -1.64
SUB1-208ENST00000511175 TCRBV5S4A2TA0A5A2 114 aa4.78□□□□□ -1.64
SUB1-208ENST00000511175 CUTAO60888 179 aa4.78□□□□□ -1.64
SUB1-208ENST00000511175 ADH4P08319 380 aa4.78□□□□□ -1.64
SUB1-208ENST00000511175 HIBADHP31937 336 aaKnown RBP4.78□□□□□ -1.64
SUB1-208ENST00000511175 MSX2P35548 267 aaPredicted RBP4.78□□□□□ -1.64
SUB1-208ENST00000511175 ETFBP38117 255 aa4.78□□□□□ -1.64
SUB1-208ENST00000511175 DBPQ10586 325 aaPredicted RBP4.78□□□□□ -1.64
SUB1-208ENST00000511175 NTRK3Q16288 839 aa4.78□□□□□ -1.64
SUB1-208ENST00000511175 ZMAT1Q5H9K5 638 aa4.78□□□□□ -1.64
SUB1-208ENST00000511175 PCSK4Q6UW60 755 aa4.78□□□□□ -1.64
SUB1-208ENST00000511175 RSPO2Q6UXX9 243 aaPredicted RBP4.78□□□□□ -1.64
SUB1-208ENST00000511175 ZNF483Q8TF39 744 aaPredicted RBP4.78□□□□□ -1.64
SUB1-208ENST00000511175 ZG16BQ96DA0 208 aa4.78□□□□□ -1.64
SUB1-208ENST00000511175 BLACEA4D250 179 aa4.77□□□□□ -1.65
SUB1-208ENST00000511175 ARHGAP6O43182 974 aa4.77□□□□□ -1.65
SUB1-208ENST00000511175 ADCY8P40145 1251 aa4.77□□□□□ -1.65
SUB1-208ENST00000511175 ETV4P43268 484 aa4.77□□□□□ -1.65
SUB1-208ENST00000511175 HNRNPA0Q13151 305 aaKnown RBP4.77□□□□□ -1.65
SUB1-208ENST00000511175 FXNQ16595 210 aa4.77□□□□□ -1.65
SUB1-208ENST00000511175 KIZQ2M2Z5 673 aa4.77□□□□□ -1.65
SUB1-208ENST00000511175 WDR72Q3MJ13 1102 aa4.77□□□□□ -1.65
SUB1-208ENST00000511175 ZDHHC5Q9C0B5 715 aa4.77□□□□□ -1.65
SUB1-208ENST00000511175 TGIF2Q9GZN2 237 aa4.77□□□□□ -1.65
SUB1-208ENST00000511175 IPPKQ9H8X2 491 aa4.77□□□□□ -1.65
SUB1-208ENST00000511175 CEP72Q9P209 647 aa4.77□□□□□ -1.65
SUB1-208ENST00000511175 PRKAG3Q9UGI9 489 aa4.77□□□□□ -1.65
SUB1-208ENST00000511175 NUB1Q9Y5A7 615 aa4.77□□□□□ -1.65
SUB1-208ENST00000511175 DMRT1Q9Y5R6 373 aa4.77□□□□□ -1.65
SUB1-208ENST00000511175 FAM90A27PA6NNH2 459 aa4.76□□□□□ -1.65
SUB1-208ENST00000511175 SOD2P04179 222 aa4.76□□□□□ -1.65
SUB1-208ENST00000511175 KRT4P19013 534 aa4.76□□□□□ -1.65
SUB1-208ENST00000511175 KCNQ1P51787 676 aa4.76□□□□□ -1.65
SUB1-208ENST00000511175 NFYCQ13952 458 aa4.76□□□□□ -1.65
SUB1-208ENST00000511175 TNNI3KQ59H18 835 aa4.76□□□□□ -1.65
SUB1-208ENST00000511175 BTBD8Q5XKL5 378 aa4.76□□□□□ -1.65
SUB1-208ENST00000511175 DPP8Q6V1X1 898 aaPredicted RBP4.76□□□□□ -1.65
SUB1-208ENST00000511175 Q6ZPA2 131 aa4.76□□□□□ -1.65
SUB1-208ENST00000511175 EEPD1Q7L9B9 569 aa4.76□□□□□ -1.65
SUB1-208ENST00000511175 MRGPRGQ86SM5 289 aa4.76□□□□□ -1.65
SUB1-208ENST00000511175 GPR135Q8IZ08 494 aa4.76□□□□□ -1.65
SUB1-208ENST00000511175 DCAF4Q8WV16 495 aa4.76□□□□□ -1.65
SUB1-208ENST00000511175 CLIP3Q96DZ5 547 aa4.76□□□□□ -1.65
SUB1-208ENST00000511175 SCYL1Q96KG9 808 aa4.76□□□□□ -1.65
SUB1-208ENST00000511175 CRAMP1Q96RY5 1269 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms